BP914739 |
Clone id |
YMU001_000062_D03 |
Library |
YMU01 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_D03. |
Accession |
BP914739 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATTCGCGGCCGACTATCAGCTAGAGTTTGTCTGCACGCATACTTTATTTTCTTGCTGAA ATTTCTCTCATTGCGCTTTTGACGATATCGATTTAATCTTAGCTTCCTTTCTTCCAAGGA GTAATGGCCAACCTTGAACCCCGTATTTTCCTCACTAGCAAGGTGCTCAAATCGACTTGG ATTATTGTCTCCGTACAATAATTGCAGACCCTGAATGTCACCAGTACTGCACACTCGCCT CATGGGGGTTGTGGGTGAACTTTCCGTCAAGCCTAGTGAGCAAGCCGCTTGATAGTCTGA AATATTGTTTGAGGTCTGGTATTCCAAAGATGGCATCTGTACTGAAGAGACACTGAAGTC CTCCGGACAAGTACCAAGATGCCCTGAAAATCTGAGCTGTCCAAGAGCATGGCTGCTTCG ACTTCTATGCATAGTTGCAATGCCAGACCCATCTTGCATCATGCAGTGCGGGATGGCTCT ATGGTACACATCACCTCGTAGCGTCAGAGTAGCAGCTGGATCCGTTAAGGTCGTTGGCTG CATAACTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10N34 |
Definition |
sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica |
Align length |
36 |
Score (bit) |
47.0 |
E-value |
6.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKV5 |
Definition |
tr|B8LKV5|B8LKV5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
152 |
Score (bit) |
114.0 |
E-value |
4.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914739|Adiantum capillus-veneris mRNA, clone: YMU001_000062_D03. (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKV5|B8LKV5_PICSI Putative uncharacterized protein OS=Picea... 114 4e-24 tr|A9SEM3|A9SEM3_PHYPA Predicted protein OS=Physcomitrella paten... 110 4e-23 tr|A9RGN7|A9RGN7_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22 tr|A9SZR6|A9SZR6_PHYPA Predicted protein OS=Physcomitrella paten... 106 9e-22 tr|A9SS91|A9SS91_PHYPA Predicted protein OS=Physcomitrella paten... 103 6e-21 tr|Q6I5J7|Q6I5J7_ORYSJ Os05g0466100 protein OS=Oryza sativa subs... 95 2e-18 tr|Q5QMF4|Q5QMF4_ORYSJ cDNA clone:002-154-E04, full insert seque... 93 1e-17 tr|A2WWR2|A2WWR2_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|Q9FN62|Q9FN62_ARATH Gb|AAF07370.1 OS=Arabidopsis thaliana GN=... 88 3e-16 tr|Q5Q0A4|Q5Q0A4_ARATH Putative uncharacterized protein OS=Arabi... 88 3e-16 tr|A7QNK9|A7QNK9_VITVI Chromosome chr2 scaffold_132, whole genom... 87 8e-16 tr|Q2HU26|Q2HU26_MEDTR CCT OS=Medicago truncatula GN=MtrDRAFT_AC... 86 1e-15 tr|A7NZ95|A7NZ95_VITVI Chromosome chr6 scaffold_3, whole genome ... 86 1e-15 tr|B0F827|B0F827_CUCSA Zinc finger-like protein OS=Cucumis sativ... 84 4e-15 tr|A7NXH7|A7NXH7_VITVI Chromosome chr5 scaffold_2, whole genome ... 84 5e-15 tr|B8AZ18|B8AZ18_ORYSI Putative uncharacterized protein OS=Oryza... 81 4e-14 tr|B6SZK2|B6SZK2_MAIZE CCT OS=Zea mays PE=2 SV=1 80 5e-14 tr|A5B9U7|A5B9U7_VITVI Putative uncharacterized protein OS=Vitis... 80 7e-14 tr|A3B4W1|A3B4W1_ORYSJ Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|Q9CAJ6|Q9CAJ6_ARATH Putative uncharacterized protein T12P18.1... 78 4e-13 tr|Q67ZF8|Q67ZF8_ARATH Putative uncharacterized protein At1g6382... 78 4e-13 tr|Q9AV79|Q9AV79_ORYSJ Putative flowering-time gene protein (CCT... 77 6e-13 tr|Q1PFY7|Q1PFY7_ARATH Zinc finger CONSTANS-like protein OS=Arab... 77 6e-13 tr|Q0IX46|Q0IX46_ORYSJ Os10g0466500 protein OS=Oryza sativa subs... 77 6e-13 tr|B8BHD3|B8BHD3_ORYSI Putative uncharacterized protein OS=Oryza... 77 6e-13 tr|A3C5K6|A3C5K6_ORYSJ Putative uncharacterized protein OS=Oryza... 77 6e-13 tr|A7PWM9|A7PWM9_VITVI Chromosome chr19 scaffold_35, whole genom... 76 1e-12 tr|Q8GXK9|Q8GXK9_ARATH Putative uncharacterized protein At1g0450... 75 2e-12 tr|Q6E267|Q6E267_ARATH Putative uncharacterized protein OS=Arabi... 73 1e-11 tr|Q5BPS2|Q5BPS2_ARATH Putative uncharacterized protein OS=Arabi... 73 1e-11
>tr|B8LKV5|B8LKV5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 447
Score = 114 bits (284), Expect = 4e-24 Identities = 71/152 (46%), Positives = 90/152 (59%), Gaps = 8/152 (5%) Frame = -1
Query: 432 MHRSRSSHALGQLRFSGHLGTCPEDFSVSSV-----QMPSLEYQTSNNISDYQAACSLGL 268 M RS SSH+L QLR + + S V ++PS + +SD Q G+ Sbjct: 236 MQRSFSSHSLDQLRTNHRVNEASFHPQFSPVYTTVQELPSTAQRLQPQLSDLQ-----GM 290
Query: 267 TESSPTTPMRRVCSTGDIQ---GLQLLYGDNNPSRFEHLASEENTGFKVGHYSLEERKLR 97 MRRV STGDIQ G+ L +G +P E +S E GFK+G YS EERK R Sbjct: 291 NIRPVMRSMRRVFSTGDIQTSNGMHLNHGSGSPLTSE-TSSFEEAGFKIGRYSAEERKQR 349
Query: 96 LNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 ++RYR+KR ERNF+KKIKYACR+TLADSRPR+ Sbjct: 350 IHRYRKKRTERNFNKKIKYACRKTLADSRPRV 381
>tr|A9SEM3|A9SEM3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164568 PE=4 SV=1 Length = 593
Score = 110 bits (276), Expect = 4e-23 Identities = 72/162 (44%), Positives = 97/162 (59%), Gaps = 11/162 (6%) Frame = -1
Query: 453 DGSGI--------ATMHRSRSSHALGQLRFSGHLGTCPEDFSVSSVQMPSLEYQTSNNIS 298 DG G+ ++M RS SSHALGQLR H+ + P S S++ + + S ++ Sbjct: 373 DGDGLQPLPQMTRSSMQRSFSSHALGQLR---HMNSAPPQ-SGSAMNSRHTQVERSVELT 428
Query: 297 DYQAACSLGLTESSP---TTPMRRVCSTGDIQGLQLLYGDNNPSRFEHLASEENTGFKVG 127 A + ES MRRV S GDIQ L + G + S S E+ ++VG Sbjct: 429 SPGAQLQPSVAESQSFGMRPMMRRVYSAGDIQTLNRMQGGMSGSASP---SFEDGNYRVG 485
Query: 126 HYSLEERKLRLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 YSLEERKLR++RY+QKR++RNF+KKIKYACR+TLADSRPR+ Sbjct: 486 KYSLEERKLRIHRYQQKRSQRNFNKKIKYACRKTLADSRPRV 527
>tr|A9RGN7|A9RGN7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158971 PE=4 SV=1 Length = 622
Score = 107 bits (266), Expect = 5e-22 Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 10/155 (6%) Frame = -1
Query: 435 TMHRSRSSHALGQLRFSGHLGTCPEDFSVS----------SVQMPSLEYQTSNNISDYQA 286 +M RS SSHALGQLR H+G+ P S + S + N ++Q Sbjct: 413 SMQRSYSSHALGQLR---HMGSAPPSVENGVNSRHSQMDRSGALTSPGARLQPNPGEFQ- 468
Query: 285 ACSLGLTESSPTTPMRRVCSTGDIQGLQLLYGDNNPSRFEHLASEENTGFKVGHYSLEER 106 S+G+ S P MRRV S GDIQ L + G S S ++ ++VG YS+EER Sbjct: 469 --SVGM-RSMPNVGMRRVYSAGDIQTLNGMQGRLTGSASP---SFDDGNYRVGKYSMEER 522
Query: 105 KLRLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 K+R+ RY+QKR++RNF+KKIKYACR+TLADSRPR+ Sbjct: 523 KIRITRYQQKRSQRNFNKKIKYACRKTLADSRPRV 557
>tr|A9SZR6|A9SZR6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167315 PE=4 SV=1 Length = 731
Score = 106 bits (264), Expect = 9e-22 Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 10/155 (6%) Frame = -1
Query: 435 TMHRSRSSHALGQLRFSGHLGTCPEDFSVSSV----------QMPSLEYQTSNNISDYQA 286 +M RS SSHALGQLR H+ + P S ++PS + +I+++Q Sbjct: 490 SMQRSFSSHALGQLR---HMNSAPSPSGNGSASRHSQMDRSGELPSPGARLQPSIAEFQ- 545
Query: 285 ACSLGLTESSPTTPMRRVCSTGDIQGLQLLYGDNNPSRFEHLASEENTGFKVGHYSLEER 106 S+G+ MRRV S GDIQ L + G + S E++ ++VG YS+EER Sbjct: 546 --SVGMRPM-----MRRVYSAGDIQTLNGMQGGLSGGGSP---SFEDSNYRVGKYSMEER 595
Query: 105 KLRLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 K+R++RY+QKR++RNF+KKIKYACR+TLADSRPR+ Sbjct: 596 KIRIHRYQQKRSQRNFNKKIKYACRKTLADSRPRV 630
>tr|A9SS91|A9SS91_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233980 PE=4 SV=1 Length = 601
Score = 103 bits (257), Expect = 6e-21 Identities = 71/158 (44%), Positives = 94/158 (59%), Gaps = 13/158 (8%) Frame = -1
Query: 435 TMHRSRSSHALGQLRFSGHLGTCPEDFSVSSVQMPSLEYQTSNNISDYQAACSL------ 274 +M RS SSHALGQLR H+G+ +PS+E T++ S L Sbjct: 326 SMQRSYSSHALGQLR---HIGSA----------LPSMENGTTSRHSQIDRRGGLTSPGAR 372
Query: 273 ---GLTESSPTTPMRRVCSTGDIQ---GLQL-LYGDNNPSRFEHLASEENTGFKVGHYSL 115 L E + MRRV S GDIQ G+Q L G ++PS ++ ++VG YSL Sbjct: 373 LQPNLAEFQ-SIGMRRVYSAGDIQTLNGMQSGLKGSSSPSF-------DDGNYRVGKYSL 424
Query: 114 EERKLRLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 EERK+R+ RY+QKR++RNF+KKIKYACR+TLADSRPR+ Sbjct: 425 EERKIRITRYQQKRSQRNFNKKIKYACRKTLADSRPRV 462
>tr|Q6I5J7|Q6I5J7_ORYSJ Os05g0466100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0009E21.8 PE=2 SV=1 Length = 324
Score = 95.1 bits (235), Expect = 2e-18 Identities = 66/148 (44%), Positives = 83/148 (56%), Gaps = 4/148 (2%) Frame = -1
Query: 432 MHRSRSSHALGQLRFSGHLGTCPEDFSVSSVQMPSLEYQTSNNISDYQAACSLGLTESSP 253 +HRS SSH+L R S L + FS SS P+ + Q +S ++ S L E S Sbjct: 73 IHRSTSSHSLLHHRLSDLLNSNAA-FSYSSA--PACQLQPLPPVSSSTSSSSGDLLEFSS 129
Query: 252 TTPMRRVCSTGDIQGLQLLYGDNNPSRFEHLASEENTGF----KVGHYSLEERKLRLNRY 85 T +RRV STGD+Q + + P F + G KVG YS EERK R+ RY Sbjct: 130 GT-LRRVFSTGDLQAMNVPPSPPPPPPFSGDICIQEVGGPFSQKVGRYSAEERKERIERY 188
Query: 84 RQKRNERNFSKKIKYACRQTLADSRPRI 1 R KR +RNF KKI YACR+TLADSRPR+ Sbjct: 189 RVKRQQRNFHKKITYACRKTLADSRPRV 216
>tr|Q5QMF4|Q5QMF4_ORYSJ cDNA clone:002-154-E04, full insert sequence OS=Oryza sativa subsp. japonica GN=P0506B12.21 PE=2 SV=1 Length = 335
Score = 92.8 bits (229), Expect = 1e-17 Identities = 67/153 (43%), Positives = 85/153 (55%), Gaps = 9/153 (5%) Frame = -1
Query: 432 MHRSRSSHALGQ-LRFSGHLGTCPEDFSVSSVQMPSLEYQTSNNISDYQAACSLGLTESS 256 + RS SSH+L L+ + H G S SS L S++ S + S L E + Sbjct: 81 IQRSISSHSLPHHLQLTDHFGGAFFSSSSSSSHQLPLPPPLSSSPS----SSSGDLFEFT 136
Query: 255 PTTPMRRVCSTGDIQGLQLLYGDNNPSRFEHLASEENTGF--------KVGHYSLEERKL 100 P+RRV STGD+QG+ N S L S E+ G KVG YS EERK Sbjct: 137 SPCPVRRVFSTGDLQGM------NGSSPPRPLPSGESCGQDGSGPFSQKVGRYSAEERKE 190
Query: 99 RLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 R+ RYR KR++RNF+KKI YACR+TLADSRPR+ Sbjct: 191 RIERYRVKRHQRNFNKKITYACRKTLADSRPRV 223
>tr|A2WWR2|A2WWR2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04338 PE=4 SV=1 Length = 334
Score = 92.8 bits (229), Expect = 1e-17 Identities = 67/153 (43%), Positives = 85/153 (55%), Gaps = 9/153 (5%) Frame = -1
Query: 432 MHRSRSSHALGQ-LRFSGHLGTCPEDFSVSSVQMPSLEYQTSNNISDYQAACSLGLTESS 256 + RS SSH+L L+ + H G S SS L S++ S + S L E + Sbjct: 80 IQRSISSHSLPHHLQLTDHFGGAFFSSSSSSSHQLPLPPPLSSSPS----SSSGDLFEFT 135
Query: 255 PTTPMRRVCSTGDIQGLQLLYGDNNPSRFEHLASEENTGF--------KVGHYSLEERKL 100 P+RRV STGD+QG+ N S L S E+ G KVG YS EERK Sbjct: 136 SPCPVRRVFSTGDLQGM------NGSSPPRPLPSGESCGQDGSGPFSQKVGRYSAEERKE 189
Query: 99 RLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 R+ RYR KR++RNF+KKI YACR+TLADSRPR+ Sbjct: 190 RIERYRVKRHQRNFNKKITYACRKTLADSRPRV 222
>tr|Q9FN62|Q9FN62_ARATH Gb|AAF07370.1 OS=Arabidopsis thaliana GN=At5g41380 PE=4 SV=1 Length = 315
Score = 87.8 bits (216), Expect = 3e-16 Identities = 52/119 (43%), Positives = 71/119 (59%) Frame = -1
Query: 357 FSVSSVQMPSLEYQTSNNISDYQAACSLGLTESSPTTPMRRVCSTGDIQGLQLLYGDNNP 178 F++ + +L Y NN+S + A ++ MRRV STGD+Q + + Sbjct: 146 FNIPMMDSSNLSY---NNLSSPENAFF--------SSQMRRVYSTGDLQNNMEMQRSSEN 194
Query: 177 SRFEHLASEENTGFKVGHYSLEERKLRLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 S + E FKVG YS EERK ++++YR KRN+RNF+K IKYACR+TLADSRPRI Sbjct: 195 ST---MPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRI 250
>tr|Q5Q0A4|Q5Q0A4_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g41380 PE=2 SV=1 Length = 307
Score = 87.8 bits (216), Expect = 3e-16 Identities = 52/119 (43%), Positives = 71/119 (59%) Frame = -1
Query: 357 FSVSSVQMPSLEYQTSNNISDYQAACSLGLTESSPTTPMRRVCSTGDIQGLQLLYGDNNP 178 F++ + +L Y NN+S + A ++ MRRV STGD+Q + + Sbjct: 146 FNIPMMDSSNLSY---NNLSSPENAFF--------SSQMRRVYSTGDLQNNMEMQRSSEN 194
Query: 177 SRFEHLASEENTGFKVGHYSLEERKLRLNRYRQKRNERNFSKKIKYACRQTLADSRPRI 1 S + E FKVG YS EERK ++++YR KRN+RNF+K IKYACR+TLADSRPRI Sbjct: 195 ST---MPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRI 250
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