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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914749
Clone id YMU001_000062_E01
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000062_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAA
GCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGG
GAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGAT
GTGGAAGCTGCCCATGTGTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGA
GTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCA
GGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGC
CAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCACTGGCGCCTAACAAGCTTGCTC
TTATGAGCTTTTGTGTCCCAGCCACTTTGCATACATAATGAAACAACTTCCCAGTGGTGG
CTTCAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 111
Score (bit) 161.0
E-value 1.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914749|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_E01.
         (489 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   161   1e-39
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   160   2e-39
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   160   4e-39
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   158   1e-38
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   158   1e-38
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   158   1e-38
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   157   3e-38
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   157   3e-38
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   157   3e-38
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   157   3e-38
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   157   3e-38
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   156   5e-38
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   155   7e-38
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   155   1e-37
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   155   1e-37
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   154   2e-37
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   154   2e-37
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   154   2e-37
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   154   3e-37
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   154   3e-37
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   153   3e-37
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   153   5e-37
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   152   8e-37
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   152   8e-37
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   152   8e-37
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha...   152   1e-36

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  161 bits (408), Expect = 1e-39
 Identities = 70/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 181
           KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW M
Sbjct: 67  KKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 182 WKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           WKLPM GC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 127 WKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  160 bits (406), Expect = 2e-39
 Identities = 72/111 (64%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 181
           KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW M
Sbjct: 69  KKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTM 128

Query: 182 WKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           WKLPM GC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 129 WKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  160 bits (404), Expect = 4e-39
 Identities = 68/110 (61%), Positives = 86/110 (78%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GYYDGRYW MW
Sbjct: 66  KKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMW 125

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           KLPM GC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 126 KLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  158 bits (400), Expect = 1e-38
 Identities = 68/110 (61%), Positives = 84/110 (76%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS+E ++KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 115

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           KLPM GC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  158 bits (399), Expect = 1e-38
 Identities = 67/110 (60%), Positives = 83/110 (75%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G ++REH    GYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 115

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           KLPM GC DA  VL E+ E  KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  158 bits (399), Expect = 1e-38
 Identities = 68/110 (61%), Positives = 83/110 (75%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MW
Sbjct: 57  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 116

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           KLPM GC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  157 bits (396), Expect = 3e-38
 Identities = 69/111 (62%), Positives = 83/111 (74%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MW
Sbjct: 67  KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           KLPM GC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  157 bits (396), Expect = 3e-38
 Identities = 69/111 (62%), Positives = 83/111 (74%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MW
Sbjct: 67  KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           KLPM GC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  157 bits (396), Expect = 3e-38
 Identities = 69/111 (62%), Positives = 83/111 (74%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MW
Sbjct: 67  KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           KLPM GC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  157 bits (396), Expect = 3e-38
 Identities = 69/111 (62%), Positives = 83/111 (74%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MW
Sbjct: 67  KKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMW 126

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           KLPM GC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 127 KLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 112
Score (bit) 214.0
E-value 1.0e-54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914749|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_E01.
         (489 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   214   1e-54
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   162   6e-39
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   161   2e-38
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   159   5e-38
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   159   7e-38
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   159   9e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   159   9e-38
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   159   9e-38
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   158   1e-37
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   158   1e-37
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|Q9ZWG2|Q9ZWG2_BROCA Ribulose bisphosphate carboxylase small c...   157   2e-37

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  214 bits (546), Expect = 1e-54
 Identities = 97/112 (86%), Positives = 107/112 (95%)
 Frame = +2

Query: 2   NKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVM 181
           NKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+M
Sbjct: 62  NKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIM 121

Query: 182 WKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           WKLPM GC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 122 WKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  164 bits (414), Expect = 3e-39
 Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 181
           KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW M
Sbjct: 67  KKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 182 WKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           WKLPM GC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 127 WKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  162 bits (411), Expect = 6e-39
 Identities = 70/111 (63%), Positives = 86/111 (77%)
 Frame = +2

Query: 2   NKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVM 181
           NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH    GYYDGRYW +
Sbjct: 58  NKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTL 117

Query: 182 WKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           WKLPM GC D++ VL EI EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 118 WKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  161 bits (407), Expect = 2e-38
 Identities = 73/113 (64%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
 Frame = +2

Query: 8   KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 178
           KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 67  KFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWT 126

Query: 179 MWKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           MWKLPM GC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 127 MWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  161 bits (407), Expect = 2e-38
 Identities = 73/113 (64%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
 Frame = +2

Query: 8   KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 178
           KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 67  KFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWT 126

Query: 179 MWKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           MWKLPM GC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 127 MWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Triticum urartu GN=rbcS PE=3 SV=1
          Length = 165

 Score =  160 bits (404), Expect = 4e-38
 Identities = 68/110 (61%), Positives = 84/110 (76%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V+REH+   GYYDGRYW MW
Sbjct: 52  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYSSPGYYDGRYWTMW 111

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           KLPM GC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 112 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 161


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  159 bits (403), Expect = 5e-38
 Identities = 71/113 (62%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
 Frame = +2

Query: 8   KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 178
           KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 102 KFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 161

Query: 179 MWKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           MWKLPM GC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 MWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small
           chain OS=Triticum aestivum GN=rbcS PE=3 SV=1
          Length = 174

 Score =  159 bits (403), Expect = 5e-38
 Identities = 69/110 (62%), Positives = 84/110 (76%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 184
           KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V+REH   SGYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSSGYYDGRYWTMW 115

Query: 185 KLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           KLPM GC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  159 bits (403), Expect = 5e-38
 Identities = 69/111 (62%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVM 181
           KKFETLSYLP L+ EQ++K+VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW M
Sbjct: 68  KKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTM 127

Query: 182 WKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 334
           WKLPM GC D++ VL+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 128 WKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  159 bits (403), Expect = 5e-38
 Identities = 71/113 (62%), Positives = 90/113 (79%), Gaps = 3/113 (2%)
 Frame = +2

Query: 8   KFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWV 178
           KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW 
Sbjct: 72  KFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWT 131

Query: 179 MWKLPMCGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 337
           MWKLPM GC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 132 MWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184