BP914751
Clone id YMU001_000062_E03
Library
Length 295
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000062_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCCTGAAGGGCAAGATTGAAGTGACAATAAGCAGAGGAAGAGTTGTATGGGAGAATGGGG
TTCTAAATGTATTCCCAGGTTCTGGGAGATACATACACTTACCCCCTTACAGCTATCTTT
TTGATGGGCTTGATAAAATCGACTCCGCCTACCGTTTCCTCCCTCAAAGCACCTATGCAT
TATTCAAAGTAGGTATGGGGGAATCAGAGTATATGACTAGAGTATCCACATAGTTATATC
CTAAAGAGTCACACCATATTGATGCTTCCCTTGTATGAAATGGGAAGGCATGTCA
■■Homology search results ■■ -
sp_hit_id Q60Q85
Definition sp|Q60Q85|DHP1_CAEBR Dihydropyrimidinase 1 OS=Caenorhabditis briggsae
Align length 31
Score (bit) 44.3
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914751|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_E03.
(295 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60Q85|DHP1_CAEBR Dihydropyrimidinase 1 OS=Caenorhabditis bri... 44 2e-04
sp|Q21773|DHP1_CAEEL Dihydropyrimidinase 1 OS=Caenorhabditis ele... 43 4e-04
sp|Q18677|DHP2_CAEEL Dihydropyrimidinase 2 OS=Caenorhabditis ele... 43 5e-04
sp|Q61YQ1|DHP2_CAEBR Dihydropyrimidinase 2 OS=Caenorhabditis bri... 42 0.001
sp|Q55DL0|DPYS_DICDI Dihydropyrimidinase OS=Dictyostelium discoi... 41 0.002
sp|Q9EQF5|DPYS_MOUSE Dihydropyrimidinase OS=Mus musculus GN=Dpys... 40 0.004
sp|Q9BPU6|DPYL5_HUMAN Dihydropyrimidinase-related protein 5 OS=H... 39 0.006
sp|Q9I676|HYDA_PSEAE D-hydantoinase/dihydropyrimidinase OS=Pseud... 38 0.014
sp|Q63150|DPYS_RAT Dihydropyrimidinase OS=Rattus norvegicus GN=D... 38 0.018
sp|Q9EQF6|DPYL5_MOUSE Dihydropyrimidinase-related protein 5 OS=M... 38 0.018
sp|Q14117|DPYS_HUMAN Dihydropyrimidinase OS=Homo sapiens GN=DPYS... 37 0.030
sp|Q9JHU0|DPYL5_RAT Dihydropyrimidinase-related protein 5 OS=Rat... 37 0.039
sp|P47942|DPYL2_RAT Dihydropyrimidinase-related protein 2 OS=Rat... 37 0.039
sp|Q5R9Y6|DPYL2_PONAB Dihydropyrimidinase-related protein 2 OS=P... 37 0.039
sp|O08553|DPYL2_MOUSE Dihydropyrimidinase-related protein 2 OS=M... 37 0.039
sp|Q16555|DPYL2_HUMAN Dihydropyrimidinase-related protein 2 OS=H... 37 0.039
sp|O02675|DPYL2_BOVIN Dihydropyrimidinase-related protein 2 OS=B... 37 0.039
sp|Q90635|DPYL2_CHICK Dihydropyrimidinase-related protein 2 OS=G... 35 0.088
sp|Q62951|DPYL4_RAT Dihydropyrimidinase-related protein 4 (Fragm... 34 0.20
sp|O35098|DPYL4_MOUSE Dihydropyrimidinase-related protein 4 OS=M... 34 0.25
sp|O13022|DPYL3_XENLA Dihydropyrimidinase-related protein 3 OS=X... 33 0.57
sp|Q62952|DPYL3_RAT Dihydropyrimidinase-related protein 3 OS=Rat... 33 0.57
sp|Q62188|DPYL3_MOUSE Dihydropyrimidinase-related protein 3 OS=M... 33 0.57
sp|Q14195|DPYL3_HUMAN Dihydropyrimidinase-related protein 3 OS=H... 33 0.57
sp|O14531|DPYL4_HUMAN Dihydropyrimidinase-related protein 4 OS=H... 32 0.97
sp|Q62950|DPYL1_RAT Dihydropyrimidinase-related protein 1 OS=Rat... 32 1.3
sp|P97427|DPYL1_MOUSE Dihydropyrimidinase-related protein 1 OS=M... 32 1.3
sp|Q14194|DPYL1_HUMAN Dihydropyrimidinase-related protein 1 OS=H... 31 1.7
sp|Q8PVF4|PYRC_METMA Dihydroorotase OS=Methanosarcina mazei GN=p... 31 2.2
sp|Q4WG58|PAN1_ASPFU Actin cytoskeleton-regulatory complex prote... 31 2.2

>sp|Q60Q85|DHP1_CAEBR Dihydropyrimidinase 1 OS=Caenorhabditis
briggsae GN=dhp-1 PE=3 SV=1
Length = 489

Score = 44.3 bits (103), Expect = 2e-04
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3

Query: 9 GKIEVTISRGRVVWENGVLNVFPGSGRYIHL 101
G E+TISRGR+VW NG L PGSG+++ L
Sbjct: 432 GVAEITISRGRIVWANGQLQTVPGSGKFVPL 462


>sp|Q21773|DHP1_CAEEL Dihydropyrimidinase 1 OS=Caenorhabditis
elegans GN=dhp-1 PE=1 SV=2
Length = 489

Score = 43.1 bits (100), Expect = 4e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3

Query: 9 GKIEVTISRGRVVWENGVLNVFPGSGRYIHL 101
G EVTISRGR+VW +G L PGSG++I L
Sbjct: 432 GVAEVTISRGRIVWAHGKLQTVPGSGKFIPL 462


>sp|Q18677|DHP2_CAEEL Dihydropyrimidinase 2 OS=Caenorhabditis
elegans GN=dhp-2 PE=1 SV=1
Length = 520

Score = 42.7 bits (99), Expect = 5e-04
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3

Query: 9 GKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYL-FDGLD 134
G E+TISRGR VW NG L GSG++I L P S + F +D
Sbjct: 428 GVPEITISRGRTVWANGQLKTVQGSGQFIPLAPDSQIVFSAVD 470


>sp|Q61YQ1|DHP2_CAEBR Dihydropyrimidinase 2 OS=Caenorhabditis
briggsae GN=dhp-2 PE=3 SV=1
Length = 518

Score = 42.0 bits (97), Expect = 0.001
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3

Query: 9 GKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYL-FDGLD 134
G E TI RGR+VW +G L G+GR++ LPP S + F +D
Sbjct: 428 GVPETTICRGRIVWADGQLRTVQGAGRFVPLPPDSQIVFSAVD 470


>sp|Q55DL0|DPYS_DICDI Dihydropyrimidinase OS=Dictyostelium
discoideum GN=pyd2 PE=1 SV=1
Length = 503

Score = 41.2 bits (95), Expect = 0.002
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3

Query: 24 TISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKID 143
TI G +VW + L+ GSGR++ PP+ +FDG+++ D
Sbjct: 439 TIVAGNIVWSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRD 478


>sp|Q9EQF5|DPYS_MOUSE Dihydropyrimidinase OS=Mus musculus GN=Dpys
PE=2 SV=2
Length = 519

Score = 40.0 bits (92), Expect = 0.004
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3

Query: 21 VTISRGRVVWENGVLNVFPGSGRYIHLPPYS-YLFDGLDKIDSAYRFLP 164
VTISRGRVV+E GV NV G G++I P++ Y++ + + D +P
Sbjct: 439 VTISRGRVVYEAGVFNVTAGHGKFIPRQPFAEYIYKRIKQRDQTCTPVP 487


>sp|Q9BPU6|DPYL5_HUMAN Dihydropyrimidinase-related protein 5 OS=Homo
sapiens GN=DPYSL5 PE=1 SV=1
Length = 564

Score = 39.3 bits (90), Expect = 0.006
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3

Query: 21 VTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYRFLPQSTYALFKVGMG 200
VTISRGRVV+ENGV G+G++ L + D+ Y+ L Q L G+
Sbjct: 438 VTISRGRVVYENGVFMCAEGTGKFCPLRSFP---------DTVYKKLVQREKTLKVRGVD 488

Query: 201 ESEYMTRVST*LYP 242
+ Y+ V+ ++P
Sbjct: 489 RTPYLGDVAVVVHP 502


>sp|Q9I676|HYDA_PSEAE D-hydantoinase/dihydropyrimidinase
OS=Pseudomonas aeruginosa GN=dht PE=3 SV=1
Length = 479

Score = 38.1 bits (87), Expect = 0.014
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3

Query: 24 TISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDK 137
TIS+G+++W G L PG+GRY+ P Y +++ L +
Sbjct: 430 TISQGKLLWAAGDLRAEPGAGRYVERPAYPSVYEVLGR 467


>sp|Q63150|DPYS_RAT Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys
PE=1 SV=2
Length = 519

Score = 37.7 bits (86), Expect = 0.018
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +3

Query: 21 VTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYRFLPQSTYALFKVGMG 200
VTISRGRVV+E GV +V G G++I P++ + Y+ + Q + +
Sbjct: 439 VTISRGRVVYEAGVFDVTAGHGKFIPRQPFA---------EFIYKRVKQRDQTCTPIPVK 489

Query: 201 ESEYMTRVST*LYPKESHHIDAS 269
+ Y V T L P+E+ D +
Sbjct: 490 RAPYKGEVIT-LKPRETKEDDTA 511


>sp|Q9EQF6|DPYL5_MOUSE Dihydropyrimidinase-related protein 5 OS=Mus
musculus GN=Dpysl5 PE=1 SV=1
Length = 564

Score = 37.7 bits (86), Expect = 0.018
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +3

Query: 21 VTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYRFLPQSTYALFKVGMG 200
VTISRGRVV+ENGV G+G++ L + D Y+ L Q L G+
Sbjct: 438 VTISRGRVVYENGVFMCAEGTGKFCPLRSFP---------DIVYKKLVQREKTLKVRGVD 488

Query: 201 ESEYMTRVST*LYP 242
+ Y+ V+ ++P
Sbjct: 489 RTPYLGDVAIVVHP 502


tr_hit_id Q94J90
Definition tr|Q94J90|Q94J90_ORYSJ cDNA clone:J023114O11, full insert sequence OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 89.0
E-value 1.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914751|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_E03.
(295 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q94J90|Q94J90_ORYSJ cDNA clone:J023114O11, full insert sequen... 89 1e-16
tr|Q5VR53|Q5VR53_ORYSJ cDNA clone:J013110N21, full insert sequen... 89 1e-16
tr|A2WW59|A2WW59_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16
tr|B4FQJ2|B4FQJ2_MAIZE Putative uncharacterized protein OS=Zea m... 83 8e-15
tr|B8LLK4|B8LLK4_PICSI Putative uncharacterized protein OS=Picea... 79 1e-13
tr|A9SPL6|A9SPL6_PHYPA Predicted protein (Fragment) OS=Physcomit... 78 3e-13
tr|A9NV41|A9NV41_PICSI Putative uncharacterized protein OS=Picea... 75 2e-12
tr|Q9FMP3|Q9FMP3_ARATH Dihydropyrimidinase (Dihydropyrimidine am... 73 6e-12
tr|Q94K57|Q94K57_ARATH Putative dihydropyrimidinase OS=Arabidops... 73 6e-12
tr|Q56YS5|Q56YS5_ARATH Dihydropyrimidinase like protein OS=Arabi... 73 6e-12
tr|A7R889|A7R889_VITVI Chromosome undetermined scaffold_2360, wh... 73 8e-12
tr|Q47WW0|Q47WW0_COLP3 D-hydantoinase OS=Colwellia psychrerythra... 52 1e-05
tr|A8I2B6|A8I2B6_CHLRE Predicted protein OS=Chlamydomonas reinha... 52 1e-05
tr|B7FLG7|B7FLG7_MEDTR Putative uncharacterized protein (Fragmen... 46 8e-04
tr|A4BFN2|A4BFN2_9GAMM Dihydropyrimidinase OS=Reinekea sp. MED29... 44 0.003
tr|B1J6H0|B1J6H0_PSEPW Dihydropyrimidinase OS=Pseudomonas putida... 44 0.004
tr|Q3KAM5|Q3KAM5_PSEPF Dihydropyrimidinase OS=Pseudomonas fluore... 43 0.007
tr|Q4SMR4|Q4SMR4_TETNG Chromosome 8 SCAF14545, whole genome shot... 43 0.009
tr|A6G014|A6G014_9DELT Putative dihydropyrimidinase OS=Plesiocys... 42 0.012
tr|Q4KDM8|Q4KDM8_PSEF5 Dihydropyrimidinase OS=Pseudomonas fluore... 42 0.020
tr|Q1I8L7|Q1I8L7_PSEE4 Dihydropyrimidinase (DHPase) (Hydantoinas... 42 0.020
tr|A5W1E5|A5W1E5_PSEP1 Dihydropyrimidinase OS=Pseudomonas putida... 41 0.026
tr|Q6TTR0|Q6TTR0_PSEPU D-hydantoinase OS=Pseudomonas putida PE=4... 41 0.026
tr|A7RPQ7|A7RPQ7_NEMVE Predicted protein OS=Nematostella vectens... 41 0.026
tr|B1H1J6|B1H1J6_DANRE Dpys protein OS=Danio rerio GN=dpys PE=2 ... 41 0.034
tr|A1WQE7|A1WQE7_VEREI Dihydropyrimidinase OS=Verminephrobacter ... 41 0.034
tr|Q8K0X3|Q8K0X3_MOUSE Dpys protein (Fragment) OS=Mus musculus G... 40 0.058
tr|Q5U5B3|Q5U5B3_XENLA LOC495311 protein OS=Xenopus laevis GN=dp... 39 0.099
tr|A8E641|A8E641_BOVIN DPYSL5 protein OS=Bos taurus GN=DPYSL5 PE... 39 0.099
tr|Q53SW3|Q53SW3_HUMAN Putative uncharacterized protein DPYSL5 (... 39 0.099

>tr|Q94J90|Q94J90_ORYSJ cDNA clone:J023114O11, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0702B09.41-1 PE=2
SV=1
Length = 539

Score = 89.0 bits (219), Expect = 1e-16
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYR 155
KG +EVTISRGRVVWE+G+LNV PGSGRY+ PPYSYLFDG++K D+AYR
Sbjct: 476 KGMVEVTISRGRVVWEDGILNVVPGSGRYVRTPPYSYLFDGIEKSDAAYR 525


>tr|Q5VR53|Q5VR53_ORYSJ cDNA clone:J013110N21, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0702B09.41-2 PE=2
SV=1
Length = 511

Score = 89.0 bits (219), Expect = 1e-16
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYR 155
KG +EVTISRGRVVWE+G+LNV PGSGRY+ PPYSYLFDG++K D+AYR
Sbjct: 448 KGMVEVTISRGRVVWEDGILNVVPGSGRYVRTPPYSYLFDGIEKSDAAYR 497


>tr|A2WW59|A2WW59_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04141 PE=4 SV=1
Length = 539

Score = 89.0 bits (219), Expect = 1e-16
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYR 155
KG +EVTISRGRVVWE+G+LNV PGSGRY+ PPYSYLFDG++K D+AYR
Sbjct: 476 KGMVEVTISRGRVVWEDGILNVVPGSGRYVRTPPYSYLFDGIEKSDAAYR 525


>tr|B4FQJ2|B4FQJ2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 538

Score = 82.8 bits (203), Expect = 8e-15
Identities = 33/50 (66%), Positives = 44/50 (88%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAYR 155
KG +E+TISRGRVVWE+GVLN+ PGSGRY+ +PP+ Y+FDG++K D+ YR
Sbjct: 475 KGMVEITISRGRVVWEDGVLNIAPGSGRYVMMPPFGYVFDGIEKSDATYR 524


>tr|B8LLK4|B8LLK4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 530

Score = 78.6 bits (192), Expect = 1e-13
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAY 152
KGK+EVTISRG+VVWE+ L + GSGRYI +PP+ YLFDG+DKIDSAY
Sbjct: 472 KGKVEVTISRGKVVWEHDRLMIERGSGRYISMPPFGYLFDGMDKIDSAY 520


>tr|A9SPL6|A9SPL6_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_133247 PE=4 SV=1
Length = 484

Score = 77.8 bits (190), Expect = 3e-13
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3

Query: 3 LKGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAY 152
+KG IEVT+S+G VVWE G LNV G GRY+++ P+SYLFDGLDK+D+ Y
Sbjct: 423 MKGNIEVTVSQGNVVWEKGTLNVHRGKGRYVYMKPFSYLFDGLDKLDATY 472


>tr|A9NV41|A9NV41_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 533

Score = 75.1 bits (183), Expect = 2e-12
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAY 152
KGK+EVTISRG++VWE+ L + GSG+YI +PP+ YLFDG+DKIDS Y
Sbjct: 472 KGKVEVTISRGKIVWEHDRLMIQRGSGQYISMPPFGYLFDGIDKIDSTY 520


>tr|Q9FMP3|Q9FMP3_ARATH Dihydropyrimidinase (Dihydropyrimidine
amidohydrolase) OS=Arabidopsis thaliana GN=PYD2 PE=2
SV=1
Length = 531

Score = 73.2 bits (178), Expect = 6e-12
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAY 152
KGK+EVTI+ GR+VWEN L V P SG+YI +PP+SYLFDG++K D+ Y
Sbjct: 467 KGKVEVTIAGGRIVWENEELKVVPRSGKYIEMPPFSYLFDGIEKSDANY 515


>tr|Q94K57|Q94K57_ARATH Putative dihydropyrimidinase OS=Arabidopsis
thaliana GN=At5g12200 PE=2 SV=1
Length = 248

Score = 73.2 bits (178), Expect = 6e-12
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAY 152
KGK+EVTI+ GR+VWEN L V P SG+YI +PP+SYLFDG++K D+ Y
Sbjct: 184 KGKVEVTIAGGRIVWENEELKVVPRSGKYIEMPPFSYLFDGIEKSDANY 232


>tr|Q56YS5|Q56YS5_ARATH Dihydropyrimidinase like protein
OS=Arabidopsis thaliana GN=At5g12200 PE=2 SV=1
Length = 243

Score = 73.2 bits (178), Expect = 6e-12
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +3

Query: 6 KGKIEVTISRGRVVWENGVLNVFPGSGRYIHLPPYSYLFDGLDKIDSAY 152
KGK+EVTI+ GR+VWEN L V P SG+YI +PP+SYLFDG++K D+ Y
Sbjct: 179 KGKVEVTIAGGRIVWENEELKVVPRSGKYIEMPPFSYLFDGIEKSDANY 227