BP914753 |
Clone id |
YMU001_000062_E05 |
Library |
YMU01 |
Length |
414 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_E05. |
Accession |
BP914753 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1892Contig1 |
Sequence |
TTTTGATACCAATCAAAAAATGTGATTGCTAAAGCGTTAATTTATGTGAAGTAAAGCATG TGGTATGCACTTTTACATTGGAAACTTGTTTAGAGAAACAATATATACATAACAACAAGA AACCCGAGGCACATAAGTAACCTGAAAAGCTTGGCCTCTTGCTGGTCTGGAGCAGGGGGC GGGGGGGCATAGTGGCGTGCAGCACCATGAAAGCCCATCGGAAAACCAAAAGGATACCCT GTACCAAAGCCTGTGCCATCAGGGAAGCCATGCACTTGAAAACCGAAAAGGGAAGGAAAG AGGCCAAATCCTGCAGAAAAAGTGAAATTCCCAAAGCGAGCAGCAGCCATTGGGGCACCA GCACCCATGAAGTTGAAGCCTTGTGACTGTGGGTGATGCTGGTTGAAATGTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P72058 |
Definition |
sp|P72058|AFTA_MYCTU Arabinofuranosyltransferase aftA OS=Mycobacterium tuberculosis |
Align length |
54 |
Score (bit) |
33.1 |
E-value |
0.45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMW8 |
Definition |
tr|A9NMW8|A9NMW8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
103 |
Score (bit) |
75.1 |
E-value |
2.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914753|Adiantum capillus-veneris mRNA, clone: YMU001_000062_E05. (414 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMW8|A9NMW8_PICSI Putative uncharacterized protein OS=Picea... 75 2e-12 tr|A9T4Q7|A9T4Q7_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|A5BLE6|A5BLE6_VITVI Putative uncharacterized protein (Chromos... 57 6e-07 tr|A5B286|A5B286_VITVI Putative uncharacterized protein (Chromos... 54 5e-06 tr|Q9LN67|Q9LN67_ARATH F18O14.3 (At1g19310/F18O14_14) (Putative ... 49 2e-04 tr|Q5ZAN7|Q5ZAN7_ORYSJ cDNA clone:J023023M16, full insert sequen... 48 3e-04 tr|Q0JJ10|Q0JJ10_ORYSJ Os01g0766200 protein (Fragment) OS=Oryza ... 48 3e-04 tr|A2WVF2|A2WVF2_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|Q4LAW4|Q4LAW4_CAPCH Putative zinc finger protein OS=Capsicum ... 47 5e-04 tr|Q2QLM8|Q2QLM8_ORYSJ Os12g0636000 protein OS=Oryza sativa subs... 47 5e-04 tr|B6TI40|B6TI40_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 46 8e-04 tr|Q84SW9|Q84SW9_ORYSJ Os03g0678400 protein OS=Oryza sativa subs... 45 0.002 tr|B4FM66|B4FM66_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002 tr|A2XKL4|A2XKL4_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|B8BN68|B8BN68_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.003 tr|B6TF06|B6TF06_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 44 0.005 tr|B6T0C5|B6T0C5_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 44 0.005 tr|B6TLS1|B6TLS1_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 42 0.012 tr|A7QBW2|A7QBW2_VITVI Chromosome chr1 scaffold_75, whole genome... 42 0.012 tr|B6SUD6|B6SUD6_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 42 0.015 tr|Q6T4P9|Q6T4P9_PYRCO Putative RING zinc finger protein (Fragme... 42 0.020 tr|B4FE79|B4FE79_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.020 tr|B6UBI0|B6UBI0_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 41 0.034 tr|A7PV14|A7PV14_VITVI Chromosome chr4 scaffold_32, whole genome... 40 0.058 tr|A5BWY1|A5BWY1_VITVI Putative uncharacterized protein OS=Vitis... 40 0.058 tr|A9PIP3|A9PIP3_POPJC Putative uncharacterized protein OS=Popul... 39 0.13 tr|Q8LDY7|Q8LDY7_ARATH Putative RING zinc finger protein OS=Arab... 38 0.22 tr|O64824|O64824_ARATH Putative RING zinc finger protein OS=Arab... 38 0.22 tr|A9KKP3|A9KKP3_CLOPH Spore germination protein OS=Clostridium ... 37 0.38 tr|B7PEE9|B7PEE9_IXOSC Putative uncharacterized protein OS=Ixode... 35 1.9
>tr|A9NMW8|A9NMW8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 240
Score = 75.1 bits (183), Expect = 2e-12 Identities = 44/103 (42%), Positives = 54/103 (52%), Gaps = 4/103 (3%) Frame = -2
Query: 389 QSQGFNFMGAG-APMAAARFGNFTFSAGFGLFPSLFGFQVHXXXXXXXXXXXXXXXXXXX 213 Q Q F FMG G APM AARFGNFTFSAGFGLFPSLFGFQ+H Sbjct: 138 QQQPFGFMGGGPAPMGAARFGNFTFSAGFGLFPSLFGFQMHGFPDGVGYGAAPGYNYGFS 197
Query: 212 FHGAARH---YXXXXXXPDQQEAKLFRLLMCLGFLVVMYILFL 93 H + +Q+A L + L+ +G VV+ ++FL Sbjct: 198 NPFQGGHPHTFHQPMTREQEQQAMLSKYLLIIGIFVVVCLIFL 240
>tr|A9T4Q7|A9T4Q7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_140226 PE=4 SV=1 Length = 234
Score = 72.4 bits (176), Expect = 1e-11 Identities = 45/104 (43%), Positives = 52/104 (50%), Gaps = 3/104 (2%) Frame = -2
Query: 401 QHHPQSQGFNFM-GAGAPMAAARFGNFTFSAGFGLFPSLFGFQVH--XXXXXXXXXXXXX 231 +H QGFNFM G P A ARFGN T SAGFGLFPSLFGFQ+H Sbjct: 129 EHQYPPQGFNFMAGPTGPAATARFGNITLSAGFGLFPSLFGFQLHGFSETSGLGGGSSVH 188
Query: 230 XXXXXXFHGAARHYXXXXXXPDQQEAKLFRLLMCLGFLVVMYIL 99 G+ H QQEA L RLL+ LG V++ +L Sbjct: 189 LGSAGGLAGSHMHGTQPIMPDQQQEALLSRLLLLLGVFVIICLL 232
>tr|A5BLE6|A5BLE6_VITVI Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00014684001 PE=4 SV=1 Length = 232
Score = 56.6 bits (135), Expect = 6e-07 Identities = 33/51 (64%), Positives = 33/51 (64%), Gaps = 4/51 (7%) Frame = -2
Query: 410 HFNQHHPQSQGFNFMGA---GAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 270 HF QH GF FMG APMA ARFGNFT SA F GLFPSLF QVH Sbjct: 124 HFMQH-----GFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVH 169
>tr|A5B286|A5B286_VITVI Putative uncharacterized protein (Chromosome chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00036434001 PE=4 SV=1 Length = 229
Score = 53.5 bits (127), Expect = 5e-06 Identities = 26/44 (59%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = -2
Query: 398 HHPQSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 270 H P QG+ FMG PMA+ARFGN T SA F GL PSL VH Sbjct: 122 HFPPPQGYGFMGGFMPMASARFGNLTLSAAFGGLIPSLLNLHVH 165
>tr|Q9LN67|Q9LN67_ARATH F18O14.3 (At1g19310/F18O14_14) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g19310 PE=2 SV=1 Length = 226
Score = 48.5 bits (114), Expect = 2e-04 Identities = 44/115 (38%), Positives = 52/115 (45%), Gaps = 10/115 (8%) Frame = -2
Query: 407 FNQHHPQSQGFN-FMGA-GAPMAAARFGNFTFSAGF-GLFPSLFGFQVH----XXXXXXX 249 F HH GF FMG APMA+ARFGN T SA F GL PSLF H Sbjct: 116 FAHHH----GFGGFMGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFHGFPDAAMYGAA 171
Query: 248 XXXXXXXXXXXXFHGAARH---YXXXXXXPDQQEAKLFRLLMCLGFLVVMYILFL 93 FHG H Y QQ+ L R+L+ + F+VV++ LFL Sbjct: 172 ASGGFPHGFSNPFHGGHSHMHSYQRHTGRQGQQDHHL-RILLLIVFVVVVFSLFL 225
>tr|Q5ZAN7|Q5ZAN7_ORYSJ cDNA clone:J023023M16, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0053G03.1 PE=2 SV=1 Length = 224
Score = 47.8 bits (112), Expect = 3e-04 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = -2
Query: 413 EHFNQHHPQSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 270 +H + H P + GAGAP+A R+GN+TFSA GLFP L FQVH Sbjct: 115 DHHHDHLPHHDPWFMGGAGAPVAGGRWGNYTFSAAIGGLFP-LLSFQVH 162
>tr|Q0JJ10|Q0JJ10_ORYSJ Os01g0766200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0766200 PE=4 SV=1 Length = 305
Score = 47.8 bits (112), Expect = 3e-04 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = -2
Query: 413 EHFNQHHPQSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 270 +H + H P + GAGAP+A R+GN+TFSA GLFP L FQVH Sbjct: 196 DHHHDHLPHHDPWFMGGAGAPVAGGRWGNYTFSAAIGGLFP-LLSFQVH 243
>tr|A2WVF2|A2WVF2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03866 PE=4 SV=1 Length = 224
Score = 47.8 bits (112), Expect = 3e-04 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = -2
Query: 413 EHFNQHHPQSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 270 +H + H P + GAGAP+A R+GN+TFSA GLFP L FQVH Sbjct: 115 DHHHDHLPHHDPWFMGGAGAPVAGGRWGNYTFSAAIGGLFP-LLSFQVH 162
>tr|Q4LAW4|Q4LAW4_CAPCH Putative zinc finger protein OS=Capsicum chinense GN=rzfp PE=2 SV=1 Length = 220
Score = 47.0 bits (110), Expect = 5e-04 Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Frame = -2
Query: 380 GFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVHXXXXXXXXXXXXXXXXXXXFHG 204 GF MG P A ARFGNF+ AGF GL PSL FQ H Sbjct: 124 GFGHMGGFFPTATARFGNFSMFAGFGGLLPSLLSFQFHGFPGPTAYPTTSNHPFGYTPAY 183
Query: 203 AARHYXXXXXXPD-QQEAKLFRLLMCLGFLVVMYIL 99 H Q ++ L + + +GFLV++Y+L Sbjct: 184 HGAHVRNAHDTAQVQADSNLKFMFLLVGFLVLIYLL 219
>tr|Q2QLM8|Q2QLM8_ORYSJ Os12g0636000 protein OS=Oryza sativa subsp. japonica GN=Os12g0636000 PE=2 SV=1 Length = 234
Score = 47.0 bits (110), Expect = 5e-04 Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2
Query: 404 NQHHPQSQGFN-FMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 270 N H P + FMG G P+A AR+GN+TFSA F GLFP L FQVH Sbjct: 115 NTHFPNANPNPWFMGGGIPLANARWGNYTFSAAFGGLFP-LLSFQVH 160
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