BP914765 |
Clone id |
YMU001_000062_F05 |
Library |
YMU01 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_F05. |
Accession |
BP914765 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAACCATATACCCTGAAAACAAAAGATTCTCTCTCTCTCTCTCCCTCCACATTGCAACAT GCACAACCACATCCACAAATACACGTACATATTCAAGCTCAACCTAGAGACACATACACC TACAGCCTCAACACGAACCGGGCAGACCCAAAAAATGGGAGGGGCCATTTCTGGAAAAGC TTCAAGCCTTCAAGCCTATTGGGCACCATATGAGCAATCTATTGAGAAGGAAGAGCACCC CGAGGATGATGCAGACACCAAGATTGCAAAGCTCGAGATGGTCCTCAAGGAGCTCGTCAT CCTCAACAAGAAGATCATCGATAGCAACATTCATGGGATACAAAGAAACCTCTGGGCGCA TTACTAAGCTTGAGGTTAACACAGGGAGGAATGGTATGCAGCTGGACGTACGGACTTCAT AATCATCGATTGGGGTGGTGATCGAACCTCTTCTAATTGTCTTGCTTATGGCCCTAGTAT CATTTCTCATCTGATTCTCTATTCTCAAATGGCAACTCCCCTGTGAGCACAGCATAGCCA TTCTACGCATGGACCATCATCCCGTGTATGGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4WD89 |
Definition |
sp|A4WD89|ENGA_ENT38 GTP-binding protein engA OS=Enterobacter sp. (strain 638) |
Align length |
87 |
Score (bit) |
32.7 |
E-value |
1.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914765|Adiantum capillus-veneris mRNA, clone: YMU001_000062_F05. (574 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A4WD89|ENGA_ENT38 GTP-binding protein engA OS=Enterobacter sp... 33 1.3 sp|Q9P779|YNYB_SCHPO Sorting nexin C1711.11 OS=Schizosaccharomyc... 32 1.7 sp|Q9XCI8|ENGA_SALTY GTP-binding protein engA OS=Salmonella typh... 32 3.0 sp|Q8Z4P6|ENGA_SALTI GTP-binding protein engA OS=Salmonella typh... 32 3.0 sp|A9N205|ENGA_SALPB GTP-binding protein engA OS=Salmonella para... 32 3.0 sp|Q5PNI6|ENGA_SALPA GTP-binding protein engA OS=Salmonella para... 32 3.0 sp|Q57LJ0|ENGA_SALCH GTP-binding protein engA OS=Salmonella chol... 32 3.0 sp|Q8EPB2|EZRA_OCEIH Septation ring formation regulator ezrA OS=... 31 3.9 sp|P53791|SC5A1_SHEEP Sodium/glucose cotransporter 1 OS=Ovis ari... 31 5.1 sp|P53790|SC5A1_RAT Sodium/glucose cotransporter 1 OS=Rattus nor... 31 5.1 sp|P11170|SC5A1_RABIT Sodium/glucose cotransporter 1 OS=Oryctola... 31 5.1 sp|Q8C3K6|SC5A1_MOUSE Sodium/glucose cotransporter 1 OS=Mus musc... 31 5.1 sp|P13866|SC5A1_HUMAN Sodium/glucose cotransporter 1 OS=Homo sap... 31 5.1 sp|Q02870|ERCC3_DROME DNA excision repair protein haywire OS=Dro... 31 5.1 sp|Q60LV4|MYO3_CAEBR Myosin-3 OS=Caenorhabditis briggsae GN=myo-... 30 6.6 sp|P43774|6PGD_HAEIN 6-phosphogluconate dehydrogenase, decarboxy... 30 6.6 sp|P53792|SC5A2_RAT Sodium/glucose cotransporter 2 OS=Rattus nor... 30 8.6 sp|P26430|SC5A2_RABIT Sodium/nucleoside cotransporter OS=Oryctol... 30 8.6 sp|Q923I7|SC5A2_MOUSE Sodium/glucose cotransporter 2 OS=Mus musc... 30 8.6 sp|P31639|SC5A2_HUMAN Sodium/glucose cotransporter 2 OS=Homo sap... 30 8.6
>sp|A4WD89|ENGA_ENT38 GTP-binding protein engA OS=Enterobacter sp. (strain 638) GN=engA PE=3 SV=1 Length = 490
Score = 32.7 bits (73), Expect = 1.3 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Frame = +2
Query: 194 AYWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLWAHY*A* 373 AYWA +E+++E +E P DD + + +++ + + K + + I G R + Y Sbjct: 177 AYWAQFEEAVEGKEEPVDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV--VYDMP 234
Query: 374 G*HREEWYAAGRTD---FIIIDWGGDR 445 G R+ Y + D +++ID G R Sbjct: 235 GTTRDSIYIPMQRDEREYVLIDTAGVR 261
>sp|Q9P779|YNYB_SCHPO Sorting nexin C1711.11 OS=Schizosaccharomyces pombe GN=SPBC1711.11 PE=2 SV=1 Length = 390
Score = 32.3 bits (72), Expect = 1.7 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = +2
Query: 53 CNMH----NHIHKYTYIFKLNLETHTPTASTRTGQTQKMGGAISGKASSLQAYWAPYEQS 220 C+ H N +H Y ++ + +++ A ++ T+ G +SG S PY QS Sbjct: 100 CSTHPVISNSMHMYQFLENNSWKSYYHNAWMQSENTKSKGNNVSGGIESSIQNLDPYAQS 159
Query: 221 I-EKEEHPEDDADTKIAKLE 277 + E + +ADT ++KLE Sbjct: 160 LYETAKQLLQNADTDLSKLE 179
>sp|Q9XCI8|ENGA_SALTY GTP-binding protein engA OS=Salmonella typhimurium GN=engA PE=3 SV=2 Length = 490
Score = 31.6 bits (70), Expect = 3.0 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +2
Query: 197 YWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLWAHY*A*G 376 YWA +E EE PEDD D + +++ + + K + + I G +R + Y G Sbjct: 178 YWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV--VYDMPG 235
Query: 377 *HREEWYAAGRTD---FIIIDWGGDR 445 R+ Y D +++ID G R Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVR 261
>sp|Q8Z4P6|ENGA_SALTI GTP-binding protein engA OS=Salmonella typhi GN=engA PE=3 SV=1 Length = 490
Score = 31.6 bits (70), Expect = 3.0 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +2
Query: 197 YWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLWAHY*A*G 376 YWA +E EE PEDD D + +++ + + K + + I G +R + Y G Sbjct: 178 YWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV--VYDMPG 235
Query: 377 *HREEWYAAGRTD---FIIIDWGGDR 445 R+ Y D +++ID G R Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVR 261
>sp|A9N205|ENGA_SALPB GTP-binding protein engA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=engA PE=3 SV=1 Length = 490
Score = 31.6 bits (70), Expect = 3.0 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +2
Query: 197 YWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLWAHY*A*G 376 YWA +E EE PEDD D + +++ + + K + + I G +R + Y G Sbjct: 178 YWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV--VYDMPG 235
Query: 377 *HREEWYAAGRTD---FIIIDWGGDR 445 R+ Y D +++ID G R Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVR 261
>sp|Q5PNI6|ENGA_SALPA GTP-binding protein engA OS=Salmonella paratyphi A GN=engA PE=3 SV=1 Length = 490
Score = 31.6 bits (70), Expect = 3.0 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +2
Query: 197 YWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLWAHY*A*G 376 YWA +E EE PEDD D + +++ + + K + + I G +R + Y G Sbjct: 178 YWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV--VYDMPG 235
Query: 377 *HREEWYAAGRTD---FIIIDWGGDR 445 R+ Y D +++ID G R Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVR 261
>sp|Q57LJ0|ENGA_SALCH GTP-binding protein engA OS=Salmonella choleraesuis GN=engA PE=3 SV=1 Length = 490
Score = 31.6 bits (70), Expect = 3.0 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = +2
Query: 197 YWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLWAHY*A*G 376 YWA +E EE PEDD D + +++ + + K + + I G +R + Y G Sbjct: 178 YWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV--VYDMPG 235
Query: 377 *HREEWYAAGRTD---FIIIDWGGDR 445 R+ Y D +++ID G R Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVR 261
>sp|Q8EPB2|EZRA_OCEIH Septation ring formation regulator ezrA OS=Oceanobacillus iheyensis GN=ezrA PE=3 SV=1 Length = 564
Score = 31.2 bits (69), Expect = 3.9 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = +2
Query: 176 KASSLQAYWAPYEQSIEKEEHPEDDADTKIAKLEMVLKELVILNKKIIDSNIHGIQRNLW 355 K L+ +++SIE E +A K+ ++ L EL N+KI SNI G+ +W Sbjct: 389 KIEQLEEQHEEFKKSIENLRKDEMEAREKLIEMRRQLYEL---NRKIKKSNIPGVPGFIW 445
Query: 356 AHY 364 + Sbjct: 446 TRF 448
>sp|P53791|SC5A1_SHEEP Sodium/glucose cotransporter 1 OS=Ovis aries GN=SLC5A1 PE=2 SV=1 Length = 664
Score = 30.8 bits (68), Expect = 5.1 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1
Query: 244 LGVLFLLNRLLIWCPIGLKA*SFSRN-GPSHFLGLPGS 134 +G FL R ++W PIG A F+ N G HF+GL G+ Sbjct: 55 VGGFFLAGRSMVWWPIG--ASLFASNIGSGHFVGLAGT 90
>sp|P53790|SC5A1_RAT Sodium/glucose cotransporter 1 OS=Rattus norvegicus GN=Slc5a1 PE=2 SV=1 Length = 665
Score = 30.8 bits (68), Expect = 5.1 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1
Query: 244 LGVLFLLNRLLIWCPIGLKA*SFSRN-GPSHFLGLPGS 134 +G FL R ++W PIG A F+ N G HF+GL G+ Sbjct: 55 VGGFFLAGRSMVWWPIG--ASLFASNIGSGHFVGLAGT 90
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3EAF6 |
Definition |
tr|B3EAF6|B3EAF6_GEOLS Putative uncharacterized protein OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) |
Align length |
60 |
Score (bit) |
35.0 |
E-value |
2.9 |
Report |
|