BP914771 |
Clone id |
YMU001_000062_F11 |
Library |
YMU01 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_F11. |
Accession |
BP914771 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1241Contig1 |
Sequence |
CCTCTTTGCATCACCATGATCATCCTCATCAGGATCTGTGGCTCTCCTCTTCTTTCCTTT AGTCATCCCTCTCTCTAATTTTCATTGTTGCCAATCGCTGAGCCTCAGCAACACGTTCGG CAAGCAACATCATTTCATCTTCAAGTGCTGGAAAAGATGGCAGCTTTTTCTCAATAAGCT TCTCAATTCTTTGATAAAGTTCGATATCGTATTGGGTGACAATTGAGATAGCCCGCCCAG ACCTACCCGCACGTGCAGTACGCCCTACCCTATGAATATAGTCTTTGGAATTCATCGAAA TGTCGTAGTCGATTACAACATCCACTGATGGAATGTCTAGCCCCCTACTCGCAACATCTG TGCAGATCAGTATACTCCTTTCTCCAGCTTTAAACTTATTCAATGCACCCAACCTCTTTG GCTGGCTCATTTGACCATTAATTGGTATGGCATCAAGCCCTAGGTTCCGAAGAATCATGG CTACCTTCCTTGTGCACTCACAAGTCCGTGTAAAAACCATAGACGTGCTTCCTGCCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GY84 |
Definition |
sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana |
Align length |
151 |
Score (bit) |
190.0 |
E-value |
3.0e-48 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2PEX8 |
Definition |
tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifolium pratense |
Align length |
153 |
Score (bit) |
201.0 |
E-value |
2.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914771|Adiantum capillus-veneris mRNA, clone: YMU001_000062_F11. (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifol... 201 2e-50 tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella paten... 200 5e-50 tr|A7QBY9|A7QBY9_VITVI Chromosome chr1 scaffold_75, whole genome... 199 6e-50 tr|A7R2P2|A7R2P2_VITVI Chromosome undetermined scaffold_438, who... 199 1e-49 tr|A8IJV1|A8IJV1_CHLRE Predicted protein OS=Chlamydomonas reinha... 193 6e-48 tr|A4S5D5|A4S5D5_OSTLU Predicted protein OS=Ostreococcus lucimar... 186 5e-46 tr|A7SRU4|A7SRU4_NEMVE Predicted protein OS=Nematostella vectens... 186 7e-46 tr|Q9H4E3|Q9H4E3_HUMAN DEAD box protein OS=Homo sapiens GN=E4-DB... 184 3e-45 tr|Q53GJ1|Q53GJ1_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 47... 184 3e-45 tr|B3KXP4|B3KXP4_HUMAN cDNA FLJ45812 fis, clone NT2RP7016508, hi... 184 3e-45 tr|Q5ZLB0|Q5ZLB0_CHICK Putative uncharacterized protein OS=Gallu... 183 4e-45 tr|Q502B4|Q502B4_DANRE Zgc:112350 OS=Danio rerio GN=zgc:112350 P... 181 2e-44 tr|Q6INR0|Q6INR0_XENLA MGC81303 protein OS=Xenopus laevis GN=ddx... 180 4e-44 tr|Q5BIZ6|Q5BIZ6_RAT DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 O... 180 4e-44 tr|Q7Z4B1|Q7Z4B1_HUMAN MSTP162 OS=Homo sapiens GN=MST162 PE=2 SV=1 180 5e-44 tr|Q4VBG1|Q4VBG1_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 47... 179 8e-44 tr|Q3TEK1|Q3TEK1_MOUSE Putative uncharacterized protein OS=Mus m... 179 8e-44 tr|B3RQA4|B3RQA4_TRIAD Putative uncharacterized protein (Fragmen... 179 8e-44 tr|A8PGU8|A8PGU8_BRUMA ATP-dependent RNA helicase T26G10.1 in ch... 172 1e-42 tr|B6LBZ1|B6LBZ1_BRAFL Putative uncharacterized protein OS=Branc... 174 1e-42 tr|Q922S6|Q922S6_MOUSE Ddx47 protein OS=Mus musculus GN=Ddx47 PE... 175 1e-42 tr|B6KZV0|B6KZV0_BRAFL Putative uncharacterized protein OS=Branc... 172 3e-42 tr|B4MDP0|B4MDP0_DROVI GJ16136 OS=Drosophila virilis GN=GJ16136 ... 174 3e-42 tr|B4KGP2|B4KGP2_DROMO GI21075 OS=Drosophila mojavensis GN=GI210... 174 3e-42 tr|B4P6Z5|B4P6Z5_DROYA GE12898 OS=Drosophila yakuba GN=GE12898 P... 173 5e-42 tr|Q29NS3|Q29NS3_DROPS GA21647 OS=Drosophila pseudoobscura pseud... 172 8e-42 tr|B4JQB9|B4JQB9_DROGR GH13670 OS=Drosophila grimshawi GN=GH1367... 172 8e-42 tr|B4GJI5|B4GJI5_DROPE GL25891 OS=Drosophila persimilis GN=GL258... 172 8e-42 tr|B3MN83|B3MN83_DROAN GF14739 OS=Drosophila ananassae GN=GF1473... 172 1e-41 tr|B4N7D0|B4N7D0_DROWI GK21047 OS=Drosophila willistoni GN=GK210... 171 2e-41
>tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifolium pratense PE=2 SV=1 Length = 440
Score = 201 bits (512), Expect = 2e-50 Identities = 103/153 (67%), Positives = 124/153 (81%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 AGSTSMVFTRTC+ TR +A+ILRNLGL AIPING MSQPKRLGALNKFK+G+ +IL+CTD Sbjct: 249 AGSTSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTD 308
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIP+VD+VI+YDI NSKDYIH AIS+V QY++E Y +IEKL Sbjct: 309 VASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 368
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP +PA E+E++LL ERV+EA+RLA K+ Sbjct: 369 IGKKLPEYPAQEEEVLLLEERVSEAKRLAATKM 401
>tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_178010 PE=3 SV=1 Length = 452
Score = 200 bits (508), Expect = 5e-50 Identities = 102/151 (67%), Positives = 124/151 (82%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 AG+T+MVFTRTCE TRK++++LRNLG AIPI+GQMSQPKRLGAL KFKAG+ +ILICTD Sbjct: 257 AGNTAMVFTRTCEATRKLSLVLRNLGFVAIPISGQMSQPKRLGALAKFKAGDCNILICTD 316
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIPSV++VI+YDI NSKDYIH AIS+V QYD+ELYQ+IE+L Sbjct: 317 VASRGLDIPSVNLVINYDIPTNSKDYIHRVGRTARAGRSGRAISMVCQYDVELYQKIEEL 376
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATM 83 I KKLP F ++E++L+ ERV+EAQRLATM Sbjct: 377 IGKKLPEFSHQQEEVLLMLERVSEAQRLATM 407
>tr|A7QBY9|A7QBY9_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035163001 PE=3 SV=1 Length = 298
Score = 199 bits (507), Expect = 6e-50 Identities = 103/153 (67%), Positives = 123/153 (80%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 +GST+MVFTRTC+ TR +A++LRNLGL AIPI+G MSQ KRLGALNKFKAGE +ILICTD Sbjct: 109 SGSTTMVFTRTCDATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECNILICTD 168
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIPSVD+VI+YDI NSKDYIH AIS+V QY++E Y +IEKL Sbjct: 169 VASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWYIQIEKL 228
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP FPA E+E++LL ERV EA+R++ MKI Sbjct: 229 IGKKLPEFPAQEEEVLLLLERVTEAKRISQMKI 261
>tr|A7R2P2|A7R2P2_VITVI Chromosome undetermined scaffold_438, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013119001 PE=3 SV=1 Length = 436
Score = 199 bits (505), Expect = 1e-49 Identities = 102/153 (66%), Positives = 123/153 (80%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 +GST+MVFTRTC+ TR +A++LRNLGL AIPI+G MSQ KRLGALNKFKAGE +ILICTD Sbjct: 247 SGSTTMVFTRTCDATRLLALLLRNLGLRAIPISGHMSQAKRLGALNKFKAGECNILICTD 306
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIPSVD+VI+YDI NSKDYIH AIS+V QY++E Y +IEKL Sbjct: 307 VASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 366
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP FPA E+E++LL ERV EA+R++ MK+ Sbjct: 367 IGKKLPEFPAQEEEVLLLLERVTEAKRISQMKV 399
>tr|A8IJV1|A8IJV1_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_223 PE=3 SV=1 Length = 446
Score = 193 bits (490), Expect = 6e-48 Identities = 93/153 (60%), Positives = 122/153 (79%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 +GST M+FTRTCE TR++A++LRNLG A+PI+G MSQPKRLGALNKFK+GER+IL+ TD Sbjct: 255 SGSTFMIFTRTCESTRRIALLLRNLGFGAVPIHGHMSQPKRLGALNKFKSGERNILVATD 314
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIPSVDVVI++D+ NSKDY+H +++IVTQYD+EL+Q+IE L Sbjct: 315 VASRGLDIPSVDVVINFDVPQNSKDYVHRVGRTARAGRSGRSVTIVTQYDVELFQKIEHL 374
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 K+ F A +E++LL ERV++AQRLATM++ Sbjct: 375 TGVKMEQFQAEREEVLLLLERVSDAQRLATMQM 407
>tr|A4S5D5|A4S5D5_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_26724 PE=3 SV=1 Length = 466
Score = 186 bits (473), Expect = 5e-46 Identities = 92/153 (60%), Positives = 118/153 (77%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 + ST +VF RTC+ TRK+A+I RNLG A+PI+GQMSQPKR+ AL KFK+GER+ILI TD Sbjct: 256 SASTLIVFARTCDATRKLALIARNLGFGAVPIHGQMSQPKRIAALQKFKSGERNILIATD 315
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIPSVDVVI+YD+ NSKDY+H A+++VTQYD+ELYQ+IE+L Sbjct: 316 VASRGLDIPSVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAVTMVTQYDVELYQKIERL 375
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKL +P E+ +MLL +RV EAQR+A ++ Sbjct: 376 INKKLDKYPLEEEAVMLLYDRVNEAQRIAIQQM 408
>tr|A7SRU4|A7SRU4_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g192845 PE=3 SV=1 Length = 446
Score = 186 bits (472), Expect = 7e-46 Identities = 93/153 (60%), Positives = 117/153 (76%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 AG++ MVF TC ++V ++LRNLGLDA+P++GQMSQ KRLGALNKFK+ RSIL+ TD Sbjct: 252 AGNSFMVFCGTCNNVQRVTLMLRNLGLDAVPLHGQMSQSKRLGALNKFKSKSRSILVATD 311
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIP VDVVI++DI +SKDYIH +++ VTQYD+ELYQRIE L Sbjct: 312 VASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRSVTFVTQYDVELYQRIEHL 371
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP +P +E+E+MLL ERV EAQR A M++ Sbjct: 372 IAKKLPQYPTVEEEVMLLMERVTEAQRYARMEL 404
>tr|Q9H4E3|Q9H4E3_HUMAN DEAD box protein OS=Homo sapiens GN=E4-DBP PE=2 SV=1 Length = 455
Score = 184 bits (466), Expect = 3e-45 Identities = 93/153 (60%), Positives = 116/153 (75%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 AG++ M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA E SIL+ TD Sbjct: 262 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKESSILLATD 321
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIP VDVV+++DI +SKDYIH AI+ VTQYD+EL+QRIE L Sbjct: 322 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHL 381
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP FP +DE+M+L ERVAEAQR A M++ Sbjct: 382 IGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
>tr|Q53GJ1|Q53GJ1_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 448
Score = 184 bits (466), Expect = 3e-45 Identities = 93/153 (60%), Positives = 116/153 (75%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 AG++ M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA RSIL+ TD Sbjct: 255 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATD 314
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIP VDVV+++DI +SKDYIH AI+ VTQYD+EL+QRIE L Sbjct: 315 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHL 374
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP FP +DE+M+L ERVAEAQR A M++ Sbjct: 375 IGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 407
>tr|B3KXP4|B3KXP4_HUMAN cDNA FLJ45812 fis, clone NT2RP7016508, highly similar to Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-) OS=Homo sapiens GN=hCG_2044052 PE=2 SV=1 Length = 455
Score = 184 bits (466), Expect = 3e-45 Identities = 93/153 (60%), Positives = 116/153 (75%) Frame = -1
Query: 535 AGSTSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTD 356 AG++ M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA RSIL+ TD Sbjct: 262 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATD 321
Query: 355 VASRGLDIPSVDVVIDYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEKL 176 VASRGLDIP VDVV+++DI +SKDYIH AI+ VTQYD+EL+QRIE L Sbjct: 322 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHL 381
Query: 175 IEKKLPSFPALEDEMMLLAERVAEAQRLATMKI 77 I KKLP FP +DE+M+L ERVAEAQR A M++ Sbjct: 382 IGKKLPGFPTQDDEVMMLTERVAEAQRFARMEL 414
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