BP914777
Clone id YMU001_000062_G06
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000062_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCTCAATCTAGCTGCACATAACATAGATACTCACGACACCCTGTGTACTTTTCACAAGGA
GAGCAAAGAGCATACAAGCTCTGACTTTTTTGACACAGAGAAAAATAAGCCTCCTACTTT
ATCTGGGGTGATACACGCTCAAGAAAGGCTCGCAGTTAGGGTTGCTATGGAAGCCCTTCC
ATGCAAAGATTGTGAAAGTTTAGATCCAGATACGGCATTGCCCCTGAACGATACTTGTGA
TAGGGCGGTAGGAAGCAGTGGAGATGGTCGTTTGTGCACTGTGAGAACACCTATCATTGA
TATGGCGGATGTGGGTCCCACGGCTGTTGTTGAGGATGAAGAGACTATAAACAGCAATAT
TCAGATGTCGTGTAAACTCGCTACTCGAAGGCAGCAAGATTGTGATAAAGGCCACTGTGA
AGTGCTCAAAGAATGCAATACTAATGACAGTATTGTTCCTAATGGGGTCGATAAGCATGA
GGGGCAAGCTCAACAATTTTGTGATGATCC
■■Homology search results ■■ -
sp_hit_id O42926
Definition sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protein 13b OS=Schizosaccharomyces pombe
Align length 26
Score (bit) 32.0
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914777|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_G06.
(510 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protei... 32 1.7
sp|Q9Y6X8|ZHX2_HUMAN Zinc fingers and homeoboxes protein 2 OS=Ho... 32 2.3
sp|Q9WU81|SPX2_MOUSE Sugar phosphate exchanger 2 OS=Mus musculus... 31 2.9
sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3 OS=... 31 2.9
sp|Q5R7F2|ZHX2_PONAB Zinc fingers and homeoboxes protein 2 OS=Po... 31 3.9
sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=O... 30 6.6
sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=2 SV=1 30 6.6
sp|Q7YU81|CHN_DROME Protein charlatan OS=Drosophila melanogaster... 30 6.6
sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rat... 30 8.6
sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=M... 30 8.6
sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=H... 30 8.6

>sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protein
13b OS=Schizosaccharomyces pombe GN=vps13b PE=2 SV=1
Length = 3131

Score = 32.0 bits (71), Expect = 1.7
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -1

Query: 285 LTVHKRPSPLLPTALSQVSFRGNAVS 208
+T++K P+P +P LSQ+SFRG VS
Sbjct: 259 VTINKLPTPEIPRFLSQISFRGFDVS 284


>sp|Q9Y6X8|ZHX2_HUMAN Zinc fingers and homeoboxes protein 2 OS=Homo
sapiens GN=ZHX2 PE=1 SV=1
Length = 837

Score = 31.6 bits (70), Expect = 2.3
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2

Query: 143 ERLAVRVAMEALPCKDCESLDPDTALPLNDTCDRAVGSSGDGR 271
E+L RV + + P KDC P A T DR+ GSS DG+
Sbjct: 743 EKLVTRVKVGSEPAKDCLPAKPSEA-----TSDRSEGSSRDGQ 780


>sp|Q9WU81|SPX2_MOUSE Sugar phosphate exchanger 2 OS=Mus musculus
GN=Slc37a2 PE=2 SV=1
Length = 501

Score = 31.2 bits (69), Expect = 2.9
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Frame = -1

Query: 318 GPTSAISMI---GVLTVHKRPSPLLPTALS-----QVSFRGNAVSGSKLSQSLHGRASIA 163
G TS+I M+ GVL P L+ TA+S S +GNA + S ++ + G SI
Sbjct: 386 GITSSIVMLIICGVLV--NGPYALITTAVSADLGTHESLKGNAKALSTVTAIIDGTGSIG 443

Query: 162 TLTASLS*ACITPDKVGGLFFSVSKKSELVCSLL 61
L I+P +F+ + L C LL
Sbjct: 444 AALGPLLAGLISPTGWNNVFYMLISADVLACLLL 477


>sp|Q9UT46|MOC3_SCHPO Transcriptional regulatory protein moc3
OS=Schizosaccharomyces pombe GN=moc3 PE=1 SV=3
Length = 497

Score = 31.2 bits (69), Expect = 2.9
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -1

Query: 285 LTVHKRPSPLLPTALSQVSFR-GNAVSGSKLSQSLHGRASIATLTASLS*ACITPDK 118
L+VH PL+PT+++ S + G+ SGS SQS + +T+S + + +TP K
Sbjct: 84 LSVHSAQQPLIPTSIASSSAQTGDTFSGS--SQSNFNTNDLNQMTSSSNLSTVTPIK 138


>sp|Q5R7F2|ZHX2_PONAB Zinc fingers and homeoboxes protein 2 OS=Pongo
abelii GN=ZHX2 PE=2 SV=1
Length = 837

Score = 30.8 bits (68), Expect = 3.9
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2

Query: 143 ERLAVRVAMEALPCKDCESLDPDTALPLNDTCDRAVGSSGDGR 271
E+L RV + + P KDC P A T DR+ GSS DG+
Sbjct: 743 EKLVPRVKVGSEPAKDCLPAKPSEA-----TSDRSEGSSRDGQ 780


>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor
OS=Oryctolagus cuniculus GN=VLDLR PE=2 SV=1
Length = 873

Score = 30.0 bits (66), Expect = 6.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2

Query: 389 RQQDCDKGHCEVLKECNTNDSIVPNGVDKH 478
++QDC E LKEC+ N+ +V NG H
Sbjct: 340 QEQDCRDWSDEPLKECHVNECLVNNGGCSH 369


>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=2 SV=1
Length = 2571

Score = 30.0 bits (66), Expect = 6.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2

Query: 206 PDTALPLNDTCDRAVGSSGDGRLCTV 283
P L ++C+ ++G GDGR+CTV
Sbjct: 2066 PQAVCRLGNSCECSLGYEGDGRVCTV 2091


>sp|Q7YU81|CHN_DROME Protein charlatan OS=Drosophila melanogaster
GN=chn PE=1 SV=3
Length = 1214

Score = 30.0 bits (66), Expect = 6.6
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2

Query: 257 SGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQ 364
+G+G L T+ TP+ +A GPTAV E E+ +N+Q
Sbjct: 41 TGNG-LHTLGTPVAQVATSGPTAVPEGEQRSFTNLQ 75


>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus
norvegicus GN=Vldlr PE=2 SV=1
Length = 873

Score = 29.6 bits (65), Expect = 8.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2

Query: 389 RQQDCDKGHCEVLKECNTNDSIVPNGVDKH 478
++QDC E LKEC+ N+ +V NG H
Sbjct: 340 QEQDCRDWSDEPLKECHINECLVNNGGCSH 369


>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus
musculus GN=Vldlr PE=1 SV=1
Length = 873

Score = 29.6 bits (65), Expect = 8.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2

Query: 389 RQQDCDKGHCEVLKECNTNDSIVPNGVDKH 478
++QDC E LKEC+ N+ +V NG H
Sbjct: 340 QEQDCRDWSDEPLKECHINECLVNNGGCSH 369


tr_hit_id A7I0C9
Definition tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)
Align length 47
Score (bit) 35.4
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914777|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_G06.
(510 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein OS=Campy... 35 1.6
tr|A7QV08|A7QV08_VITVI Chromosome undetermined scaffold_183, who... 35 1.6
tr|B0W7P6|B0W7P6_CULQU E3 ubiquitin-protein ligase highwire OS=C... 35 2.1
tr|Q8JHU3|Q8JHU3_DANRE Protein kinase PKK OS=Danio rerio GN=ripk... 34 3.6
tr|Q4QCW9|Q4QCW9_LEIMA Protein kinase, putative OS=Leishmania ma... 34 3.6
tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena ... 34 3.6
tr|Q0S432|Q0S432_RHOSR Putative uncharacterized protein OS=Rhodo... 34 4.7
tr|A7RGE4|A7RGE4_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.7
tr|B6NRT9|B6NRT9_BRAFL Putative uncharacterized protein (Fragmen... 33 6.1
tr|B6L9B8|B6L9B8_BRAFL Putative uncharacterized protein OS=Branc... 33 6.1
tr|Q4P825|Q4P825_USTMA Putative uncharacterized protein OS=Ustil... 33 6.1
tr|B6LY94|B6LY94_BRAFL Putative uncharacterized protein (Fragmen... 33 8.0
tr|B8IEJ5|B8IEJ5_METNO CBS domain containing membrane protein OS... 33 8.1

>tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein
OS=Campylobacter hominis (strain ATCC BAA-381 / LMG
19568 / NCTC 13146 / CH001A) GN=CHAB381_0369 PE=4 SV=1
Length = 178

Score = 35.4 bits (80), Expect = 1.6
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2

Query: 317 PTAVVEDEETINSNIQMSCKLATRRQQDCDKGHCEVLKECNTNDSIV 457
P V++DE N I +CK + + +Q C+ G+CE + + + D I+
Sbjct: 113 PNKVIQDENGANRYIWKNCKESGKYEQKCEDGNCESVPKLDCCDRIL 159


>tr|A7QV08|A7QV08_VITVI Chromosome undetermined scaffold_183, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00007101001 PE=4 SV=1
Length = 494

Score = 35.4 bits (80), Expect = 1.6
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2

Query: 17 HNIDTHDTLCTFHKESKEHTSSDFFDTEKNKPPTLSGVIHAQERLAVRVAMEALPCKDC 193
H+ DT D L +E KEH K G++H + A+R+ C+DC
Sbjct: 403 HSADTGDVLLDMEEEDKEHA----LPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDC 457


>tr|B0W7P6|B0W7P6_CULQU E3 ubiquitin-protein ligase highwire OS=Culex
quinquefasciatus GN=CpipJ_CPIJ003142 PE=4 SV=1
Length = 2476

Score = 35.0 bits (79), Expect = 2.1
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2

Query: 248 VGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETI----NSNIQMSCKLATRRQQDCDKGH 415
+G+SGD V +++ + + +VV D+ TI NSN Q++C RR +C K H
Sbjct: 1013 IGASGDQTFVKVDESLVNASMLSKFSVVADKNTILLIPNSNYQLNCIAINRRNGNC-KAH 1071

Query: 416 CE 421
E
Sbjct: 1072 NE 1073


>tr|Q8JHU3|Q8JHU3_DANRE Protein kinase PKK OS=Danio rerio GN=ripk4
PE=2 SV=1
Length = 820

Score = 34.3 bits (77), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2

Query: 335 DEETINSNIQMSCKLATRRQQDCDKGHCEVLKECNTNDSIVPNGVDKH 478
D E++N +++ C LA + GHCEVLKE + S V N D++
Sbjct: 692 DPESVNHDLRTPCHLAAQN------GHCEVLKELLRSCSDVANAQDRN 733


>tr|Q4QCW9|Q4QCW9_LEIMA Protein kinase, putative OS=Leishmania major
GN=LmjF20.0770 PE=4 SV=1
Length = 3999

Score = 34.3 bits (77), Expect = 3.6
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Frame = +2

Query: 32 HDTLCTFHKESKEHTSSDFFDTEKNKPPTLSGVIHAQERLAVRVAMEALPCKDCESLDPD 211
++ L + + H + F PPTL G H + +R+ + +DC SL
Sbjct: 1825 NEELSSLATADEAHVNDLFVTHSSQSPPTLQGNNH---KTLLRMVDGSGAGEDCASLPSS 1881

Query: 212 TALPLNDTCDRAVGSSGDGRLCTVR------TPIIDMAD 310
+ L +TC V GD T P+ D AD
Sbjct: 1882 QTVSLLNTCSGTVAEGGDVSAATASILPSAIAPVADSAD 1920


>tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena
thermophila SB210 GN=TTHERM_01098980 PE=4 SV=1
Length = 3751

Score = 34.3 bits (77), Expect = 3.6
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2

Query: 203 DPDTALPLNDTCDRAVGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQMSCKLA 382
D + LP +C + +G L V V + + D T+N N Q SC L
Sbjct: 1031 DDSSCLPCYPSCATCQDGTSNGCLSCVSD---SFTLVNNSCLCNDGTTLNCN-QKSCSLC 1086

Query: 383 TRRQQDCDKGHCEVLKECN 439
+ + C +GH ++ CN
Sbjct: 1087 SPNCKTCAQGHAQICTSCN 1105


>tr|Q0S432|Q0S432_RHOSR Putative uncharacterized protein
OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro05927 PE=4
SV=1
Length = 116

Score = 33.9 bits (76), Expect = 4.7
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = -3

Query: 280 SAQTTISTASYRPITSIVQGQCRIWI*TFTIFAWKGFHSNPNCEPFLSV 134
SA + +STAS+ + S + G R +++ +WKG+H +P P L+V
Sbjct: 56 SAGSALSTASFASLGSALSGLSR-----WSLMSWKGWHDSPPEHPHLTV 99


>tr|A7RGE4|A7RGE4_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g80370 PE=4 SV=1
Length = 662

Score = 33.9 bits (76), Expect = 4.7
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +2

Query: 188 DCESLDPDTALPLNDTCDRAVGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQM 367
DC T P + C G +GDG++C +D G E+E NS
Sbjct: 343 DCSPDAVCTNTPGSFVCRCNKGFTGDGKICI----DVDECKTGQVKCGENEVCANSLGSF 398

Query: 368 SCKLATRRQQDCDKGHCEVLKECNT 442
+C+ A ++D +G C + EC T
Sbjct: 399 TCQCAEGYERD-SQGKCADVNECKT 422


>tr|B6NRT9|B6NRT9_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_235114 PE=4 SV=1
Length = 442

Score = 33.5 bits (75), Expect = 6.1
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2

Query: 248 VGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQMSCKLATRRQQDCDKGHCEVL 427
VG +G GR T+ V P A + E +N +Q CK+ + D +C V
Sbjct: 187 VGQTGGGRWATL---------VNPAAASDGEYRVNGGMQNLCKILVEQLGDRVTLNCPVT 237

Query: 428 KECNTNDSIV 457
K N D ++
Sbjct: 238 KVTNVEDGVL 247


>tr|B6L9B8|B6L9B8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_67738 PE=4 SV=1
Length = 4551

Score = 33.5 bits (75), Expect = 6.1
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Frame = +2

Query: 209 DTALPLND-----TCDRAV-GSSGDGRLCT-VRTPIIDMADVGPTAVVEDEETINSNIQM 367
D A PL TC++ G G+G C + ++ +D G + V + + +N+
Sbjct: 3703 DAAAPLQPGQRAYTCEQCPDGMVGNGETCEDINECLLASSDPGIHSCV-NADCVNTPGSF 3761

Query: 368 SCKLATRRQQDCDKGHCEVLKECNTNDSIVPNGVDKHEG 484
SC Q+D D HC + EC D N D H G
Sbjct: 3762 SCVCHPGYQRDGDGHHCVDINECRNKDH---NRCDPHHG 3797