BP914777 |
Clone id |
YMU001_000062_G06 |
Library |
YMU01 |
Length |
510 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_G06. |
Accession |
BP914777 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3967Contig1 |
Sequence |
CCTCAATCTAGCTGCACATAACATAGATACTCACGACACCCTGTGTACTTTTCACAAGGA GAGCAAAGAGCATACAAGCTCTGACTTTTTTGACACAGAGAAAAATAAGCCTCCTACTTT ATCTGGGGTGATACACGCTCAAGAAAGGCTCGCAGTTAGGGTTGCTATGGAAGCCCTTCC ATGCAAAGATTGTGAAAGTTTAGATCCAGATACGGCATTGCCCCTGAACGATACTTGTGA TAGGGCGGTAGGAAGCAGTGGAGATGGTCGTTTGTGCACTGTGAGAACACCTATCATTGA TATGGCGGATGTGGGTCCCACGGCTGTTGTTGAGGATGAAGAGACTATAAACAGCAATAT TCAGATGTCGTGTAAACTCGCTACTCGAAGGCAGCAAGATTGTGATAAAGGCCACTGTGA AGTGCTCAAAGAATGCAATACTAATGACAGTATTGTTCCTAATGGGGTCGATAAGCATGA GGGGCAAGCTCAACAATTTTGTGATGATCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O42926 |
Definition |
sp|O42926|VP13B_SCHPO Vacuolar protein sorting-associated protein 13b OS=Schizosaccharomyces pombe |
Align length |
26 |
Score (bit) |
32.0 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7I0C9 |
Definition |
tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) |
Align length |
47 |
Score (bit) |
35.4 |
E-value |
1.6 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914777|Adiantum capillus-veneris mRNA, clone: YMU001_000062_G06. (510 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein OS=Campy... 35 1.6 tr|A7QV08|A7QV08_VITVI Chromosome undetermined scaffold_183, who... 35 1.6 tr|B0W7P6|B0W7P6_CULQU E3 ubiquitin-protein ligase highwire OS=C... 35 2.1 tr|Q8JHU3|Q8JHU3_DANRE Protein kinase PKK OS=Danio rerio GN=ripk... 34 3.6 tr|Q4QCW9|Q4QCW9_LEIMA Protein kinase, putative OS=Leishmania ma... 34 3.6 tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena ... 34 3.6 tr|Q0S432|Q0S432_RHOSR Putative uncharacterized protein OS=Rhodo... 34 4.7 tr|A7RGE4|A7RGE4_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.7 tr|B6NRT9|B6NRT9_BRAFL Putative uncharacterized protein (Fragmen... 33 6.1 tr|B6L9B8|B6L9B8_BRAFL Putative uncharacterized protein OS=Branc... 33 6.1 tr|Q4P825|Q4P825_USTMA Putative uncharacterized protein OS=Ustil... 33 6.1 tr|B6LY94|B6LY94_BRAFL Putative uncharacterized protein (Fragmen... 33 8.0 tr|B8IEJ5|B8IEJ5_METNO CBS domain containing membrane protein OS... 33 8.1
>tr|A7I0C9|A7I0C9_CAMHC Putative uncharacterized protein OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=CHAB381_0369 PE=4 SV=1 Length = 178
Score = 35.4 bits (80), Expect = 1.6 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = +2
Query: 317 PTAVVEDEETINSNIQMSCKLATRRQQDCDKGHCEVLKECNTNDSIV 457 P V++DE N I +CK + + +Q C+ G+CE + + + D I+ Sbjct: 113 PNKVIQDENGANRYIWKNCKESGKYEQKCEDGNCESVPKLDCCDRIL 159
>tr|A7QV08|A7QV08_VITVI Chromosome undetermined scaffold_183, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007101001 PE=4 SV=1 Length = 494
Score = 35.4 bits (80), Expect = 1.6 Identities = 17/59 (28%), Positives = 25/59 (42%) Frame = +2
Query: 17 HNIDTHDTLCTFHKESKEHTSSDFFDTEKNKPPTLSGVIHAQERLAVRVAMEALPCKDC 193 H+ DT D L +E KEH K G++H + A+R+ C+DC Sbjct: 403 HSADTGDVLLDMEEEDKEHA----LPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDC 457
>tr|B0W7P6|B0W7P6_CULQU E3 ubiquitin-protein ligase highwire OS=Culex quinquefasciatus GN=CpipJ_CPIJ003142 PE=4 SV=1 Length = 2476
Score = 35.0 bits (79), Expect = 2.1 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +2
Query: 248 VGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETI----NSNIQMSCKLATRRQQDCDKGH 415 +G+SGD V +++ + + +VV D+ TI NSN Q++C RR +C K H Sbjct: 1013 IGASGDQTFVKVDESLVNASMLSKFSVVADKNTILLIPNSNYQLNCIAINRRNGNC-KAH 1071
Query: 416 CE 421 E Sbjct: 1072 NE 1073
>tr|Q8JHU3|Q8JHU3_DANRE Protein kinase PKK OS=Danio rerio GN=ripk4 PE=2 SV=1 Length = 820
Score = 34.3 bits (77), Expect = 3.6 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +2
Query: 335 DEETINSNIQMSCKLATRRQQDCDKGHCEVLKECNTNDSIVPNGVDKH 478 D E++N +++ C LA + GHCEVLKE + S V N D++ Sbjct: 692 DPESVNHDLRTPCHLAAQN------GHCEVLKELLRSCSDVANAQDRN 733
>tr|Q4QCW9|Q4QCW9_LEIMA Protein kinase, putative OS=Leishmania major GN=LmjF20.0770 PE=4 SV=1 Length = 3999
Score = 34.3 bits (77), Expect = 3.6 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%) Frame = +2
Query: 32 HDTLCTFHKESKEHTSSDFFDTEKNKPPTLSGVIHAQERLAVRVAMEALPCKDCESLDPD 211 ++ L + + H + F PPTL G H + +R+ + +DC SL Sbjct: 1825 NEELSSLATADEAHVNDLFVTHSSQSPPTLQGNNH---KTLLRMVDGSGAGEDCASLPSS 1881
Query: 212 TALPLNDTCDRAVGSSGDGRLCTVR------TPIIDMAD 310 + L +TC V GD T P+ D AD Sbjct: 1882 QTVSLLNTCSGTVAEGGDVSAATASILPSAIAPVADSAD 1920
>tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena thermophila SB210 GN=TTHERM_01098980 PE=4 SV=1 Length = 3751
Score = 34.3 bits (77), Expect = 3.6 Identities = 21/79 (26%), Positives = 33/79 (41%) Frame = +2
Query: 203 DPDTALPLNDTCDRAVGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQMSCKLA 382 D + LP +C + +G L V V + + D T+N N Q SC L Sbjct: 1031 DDSSCLPCYPSCATCQDGTSNGCLSCVSD---SFTLVNNSCLCNDGTTLNCN-QKSCSLC 1086
Query: 383 TRRQQDCDKGHCEVLKECN 439 + + C +GH ++ CN Sbjct: 1087 SPNCKTCAQGHAQICTSCN 1105
>tr|Q0S432|Q0S432_RHOSR Putative uncharacterized protein OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro05927 PE=4 SV=1 Length = 116
Score = 33.9 bits (76), Expect = 4.7 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = -3
Query: 280 SAQTTISTASYRPITSIVQGQCRIWI*TFTIFAWKGFHSNPNCEPFLSV 134 SA + +STAS+ + S + G R +++ +WKG+H +P P L+V Sbjct: 56 SAGSALSTASFASLGSALSGLSR-----WSLMSWKGWHDSPPEHPHLTV 99
>tr|A7RGE4|A7RGE4_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g80370 PE=4 SV=1 Length = 662
Score = 33.9 bits (76), Expect = 4.7 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = +2
Query: 188 DCESLDPDTALPLNDTCDRAVGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQM 367 DC T P + C G +GDG++C +D G E+E NS Sbjct: 343 DCSPDAVCTNTPGSFVCRCNKGFTGDGKICI----DVDECKTGQVKCGENEVCANSLGSF 398
Query: 368 SCKLATRRQQDCDKGHCEVLKECNT 442 +C+ A ++D +G C + EC T Sbjct: 399 TCQCAEGYERD-SQGKCADVNECKT 422
>tr|B6NRT9|B6NRT9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_235114 PE=4 SV=1 Length = 442
Score = 33.5 bits (75), Expect = 6.1 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = +2
Query: 248 VGSSGDGRLCTVRTPIIDMADVGPTAVVEDEETINSNIQMSCKLATRRQQDCDKGHCEVL 427 VG +G GR T+ V P A + E +N +Q CK+ + D +C V Sbjct: 187 VGQTGGGRWATL---------VNPAAASDGEYRVNGGMQNLCKILVEQLGDRVTLNCPVT 237
Query: 428 KECNTNDSIV 457 K N D ++ Sbjct: 238 KVTNVEDGVL 247
>tr|B6L9B8|B6L9B8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_67738 PE=4 SV=1 Length = 4551
Score = 33.5 bits (75), Expect = 6.1 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 7/99 (7%) Frame = +2
Query: 209 DTALPLND-----TCDRAV-GSSGDGRLCT-VRTPIIDMADVGPTAVVEDEETINSNIQM 367 D A PL TC++ G G+G C + ++ +D G + V + + +N+ Sbjct: 3703 DAAAPLQPGQRAYTCEQCPDGMVGNGETCEDINECLLASSDPGIHSCV-NADCVNTPGSF 3761
Query: 368 SCKLATRRQQDCDKGHCEVLKECNTNDSIVPNGVDKHEG 484 SC Q+D D HC + EC D N D H G Sbjct: 3762 SCVCHPGYQRDGDGHHCVDINECRNKDH---NRCDPHHG 3797
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