BP914778 |
Clone id |
YMU001_000062_G07 |
Library |
YMU01 |
Length |
470 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_G07. |
Accession |
BP914778 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1367Contig1 |
Sequence |
CAACATCCAGATATCAATATAAACAAAATTTGATCACACACTTACCCTGTCAAACCCACA TGATATTTTCTAAACAAATTCCTCGTAAATAGGGTGGGAAAAGGAATGCAACCAAGCAGC TAGCTGTTCCCATCTTTCCCGAGTAAAAAGCTCATCATGTATCATCCGATGGGTTGGCTA GGAACAAAATTTGTAGGATCTTTTGAATGGAGCCGCTCAAGAATGATGTCAATGGAGCTC ATTGACGCCTCTGACCTTTTATACTCAACCTCCAGCTCTTTCTGCTTCAGATTCAAAGAC ATTCGCTCATTTTCGAGTTTCATCTTCTTATTATCCAGCCTCAACTGCTCCAATTCCCTG TATCTCTTGCTGTTTACCCTTTCCCATTTAAAACGTTGCCTTTCTAACTCAAGGGCCTGT GCCAATAGTCCTACCTTTAGCTCCTCTATCTGCACCATATGTGCGCGGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2TAM9 |
Definition |
sp|Q2TAM9|TUSC1_HUMAN Tumor suppressor candidate gene 1 protein OS=Homo sapiens |
Align length |
51 |
Score (bit) |
40.8 |
E-value |
0.003 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LM63 |
Definition |
tr|B8LM63|B8LM63_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
90 |
Score (bit) |
114.0 |
E-value |
3.0e-24 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914778|Adiantum capillus-veneris mRNA, clone: YMU001_000062_G07. (470 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LM63|B8LM63_PICSI Putative uncharacterized protein OS=Picea... 114 3e-24 tr|A7PKP6|A7PKP6_VITVI Chromosome chr7 scaffold_20, whole genome... 96 7e-19 tr|A7NZS9|A7NZS9_VITVI Chromosome chr6 scaffold_3, whole genome ... 91 4e-17 tr|A7Q7C1|A7Q7C1_VITVI Chromosome chr18 scaffold_59, whole genom... 80 7e-14 tr|Q9LMN5|Q9LMN5_ARATH F16F4.11 protein (Putative uncharacterize... 79 9e-14 tr|A5AY50|A5AY50_VITVI Putative uncharacterized protein OS=Vitis... 79 1e-13 tr|A7UQU9|A7UQU9_MEDTR Homeodomain-like OS=Medicago truncatula G... 76 1e-12 tr|B6SHI3|B6SHI3_MAIZE Putative uncharacterized protein OS=Zea m... 73 8e-12 tr|A7PPN0|A7PPN0_VITVI Chromosome chr8 scaffold_23, whole genome... 73 8e-12 tr|Q2QXB1|Q2QXB1_ORYSJ Os12g0163500 protein OS=Oryza sativa subs... 72 2e-11 tr|A2ZID3|A2ZID3_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q9SR69|Q9SR69_ARATH Putative uncharacterized protein T22K18.1... 71 3e-11 tr|Q8RWY5|Q8RWY5_ARATH Putative uncharacterized protein At3g1004... 71 3e-11 tr|Q6ESZ1|Q6ESZ1_ORYSJ Os02g0542400 protein OS=Oryza sativa subs... 70 5e-11 tr|A2X5U2|A2X5U2_ORYSI Putative uncharacterized protein OS=Oryza... 70 5e-11 tr|Q9C6K4|Q9C6K4_ARATH Putative uncharacterized protein F7O12.4 ... 68 3e-10 tr|Q94FT0|Q94FT0_SOYBN Putative uncharacterized protein SHOOT2 O... 67 3e-10 tr|B6TI77|B6TI77_MAIZE Putative uncharacterized protein OS=Zea m... 67 3e-10 tr|Q94D75|Q94D75_ORYSJ Putative uncharacterized protein B1153F04... 66 1e-09 tr|Q7XXQ7|Q7XXQ7_ORYSJ Putative uncharacterized protein (Os01g03... 66 1e-09 tr|Q53PP7|Q53PP7_ORYSJ Os11g0163500 protein OS=Oryza sativa subs... 59 1e-07 tr|Q53PP6|Q53PP6_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 59 1e-07 tr|A3C8X5|A3C8X5_ORYSJ Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|A2ZBS2|A2ZBS2_ORYSI Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|A8N2N3|A8N2N3_COPC7 Predicted protein OS=Coprinopsis cinerea ... 43 0.009 tr|B4DK97|B4DK97_HUMAN cDNA FLJ52096 OS=Homo sapiens PE=2 SV=1 41 0.034 tr|A6NDZ4|A6NDZ4_HUMAN Putative uncharacterized protein CCDC147 ... 41 0.034 tr|Q4T146|Q4T146_TETNG Chromosome 7 SCAF10718, whole genome shot... 40 0.058 tr|Q54QY1|Q54QY1_DICDI Putative uncharacterized protein OS=Dicty... 39 0.100 tr|A2DDK7|A2DDK7_TRIVA Putative uncharacterized protein OS=Trich... 39 0.100
>tr|B8LM63|B8LM63_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 137
Score = 114 bits (284), Expect = 3e-24 Identities = 52/90 (57%), Positives = 76/90 (84%) Frame = -1
Query: 467 RAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLNL 288 R +Q++E KV L AQA ELE++RFKW+++ SK+ RELE+L+L+N++MKLENERM+L + Sbjct: 37 RNRTLQLQEQKVSLQAQAFELEKRRFKWQKICSKKDRELERLKLENERMKLENERMALQV 96
Query: 287 KQKELEVEYKRSEASMSSIDIILERLHSKD 198 KQKELE+E+K+SE SM+S+ ++LERL +D Sbjct: 97 KQKELEIEFKKSETSMTSVALVLERLQGRD 126
>tr|A7PKP6|A7PKP6_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019263001 PE=4 SV=1 Length = 596
Score = 96.3 bits (238), Expect = 7e-19 Identities = 46/91 (50%), Positives = 68/91 (74%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 I+ M+Q++E +V ++AQ ELE+QRFKW R +SK+ R+LE RL+N+++ LENERM L Sbjct: 328 IKNRMLQLQEQRVTIMAQGFELEKQRFKWLRYSSKKGRDLENSRLENERLGLENERMVLE 387
Query: 290 LKQKELEVEYKRSEASMSSIDIILERLHSKD 198 LKQKELE++ KR EAS+ + ++RL +D Sbjct: 388 LKQKELELDSKRPEASLDPASLGIDRLQGRD 418
>tr|A7NZS9|A7NZS9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024632001 PE=4 SV=1 Length = 438
Score = 90.5 bits (223), Expect = 4e-17 Identities = 44/91 (48%), Positives = 64/91 (70%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 I+ M+Q++E V ++AQ ELE+QRFKW R +SK+ R+LE RL+N++M LENER+ L Sbjct: 340 IKNRMLQLQEQMVTIMAQGFELEKQRFKWLRFSSKKGRDLEDSRLENERMGLENERLVLE 399
Query: 290 LKQKELEVEYKRSEASMSSIDIILERLHSKD 198 LKQKELE++ K EAS+ ++ L +D Sbjct: 400 LKQKELELDLKGPEASLDPASFCIDGLQGRD 430
>tr|A7Q7C1|A7Q7C1_VITVI Chromosome chr18 scaffold_59, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031774001 PE=4 SV=1 Length = 440
Score = 79.7 bits (195), Expect = 7e-14 Identities = 36/70 (51%), Positives = 55/70 (78%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 +R+ +Q+EE K+ + Q LELE+QRFKW+R K+ R+L++LR++N++MKLENERM+L Sbjct: 370 MRSRSLQLEEQKLQIQEQMLELEKQRFKWQRFCRKKDRDLDKLRMENERMKLENERMALE 429
Query: 290 LKQKELEVEY 261 LK+KE+ Y Sbjct: 430 LKRKEMGASY 439
>tr|Q9LMN5|Q9LMN5_ARATH F16F4.11 protein (Putative uncharacterized protein At1g21200) OS=Arabidopsis thaliana GN=At1g21200 PE=2 SV=1 Length = 443
Score = 79.3 bits (194), Expect = 9e-14 Identities = 35/69 (50%), Positives = 55/69 (79%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 + + +Q+EE K+ + + LELE+QRF+W+R + KR +ELE++R++N++MKLEN+RM L Sbjct: 374 MESRTLQLEEQKLQIQVELLELEKQRFRWQRFSKKRDQELERMRMENERMKLENDRMGLE 433
Query: 290 LKQKELEVE 264 LKQ+EL VE Sbjct: 434 LKQRELGVE 442
>tr|A5AY50|A5AY50_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021706 PE=4 SV=1 Length = 601
Score = 78.6 bits (192), Expect = 1e-13 Identities = 37/74 (50%), Positives = 57/74 (77%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 +R+ +Q+EE K+ + Q LELE+QRFKW+R K+ R+L++LR++N++MKLENERM+L Sbjct: 370 MRSRSLQLEEQKLQIQEQMLELEKQRFKWQRFCRKKDRDLDKLRMENERMKLENERMALE 429
Query: 290 LKQKELEVEYKRSE 249 LK+KE+ K S+ Sbjct: 430 LKRKEMGWPVKYSD 443
>tr|A7UQU9|A7UQU9_MEDTR Homeodomain-like OS=Medicago truncatula GN=MtrDRAFT_AC139525g26v2 PE=4 SV=1 Length = 496
Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 IR ++Q+EE K+G +QA +LE+QR KW R +SK+ RE+E+ +L+N++ +LENERM L Sbjct: 415 IRNRIMQLEEQKIGYESQAFQLEKQRLKWARYSSKKEREMERAKLENERRRLENERMVLL 474
Query: 290 LKQKELEV 267 +++KELE+ Sbjct: 475 IRKKELEL 482
>tr|B6SHI3|B6SHI3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 446
Score = 72.8 bits (177), Expect = 8e-12 Identities = 32/65 (49%), Positives = 52/65 (80%) Frame = -1
Query: 452 QIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLNLKQKEL 273 +IE+ ++ + QALEL +QR KWE + K+ RELE++RL+N++MK+EN+R+ L ++ KEL Sbjct: 373 EIEKQRMEIEVQALELAKQRLKWEAFSKKKDRELEKMRLENEQMKIENKRLELEVRYKEL 432
Query: 272 EVEYK 258 E+E+K Sbjct: 433 ELEHK 437
>tr|A7PPN0|A7PPN0_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021711001 PE=4 SV=1 Length = 688
Score = 72.8 bits (177), Expect = 8e-12 Identities = 36/82 (43%), Positives = 59/82 (71%), Gaps = 3/82 (3%) Frame = -1
Query: 470 IRAHMVQIEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLN 291 +R+ M+Q+EE +V +A ELE+QR KW + +SK+ RE+E+ +L N++ +LENERM+L Sbjct: 596 MRSRMMQLEEQRVSYQCKAFELEKQRLKWVKFSSKKEREMEREKLVNQRKRLENERMALL 655
Query: 290 LKQKE---LEVEYKRSEASMSS 234 L+QKE LE+ +++ + SS Sbjct: 656 LRQKEVELLEIHHQQQQQQHSS 677
>tr|Q2QXB1|Q2QXB1_ORYSJ Os12g0163500 protein OS=Oryza sativa subsp. japonica GN=Os12g0163500 PE=2 SV=1 Length = 432
Score = 71.6 bits (174), Expect = 2e-11 Identities = 32/65 (49%), Positives = 50/65 (76%) Frame = -1
Query: 449 IEELKVGLLAQALELERQRFKWERVNSKRYRELEQLRLDNKKMKLENERMSLNLKQKELE 270 +EE ++ + QA+ L +QR KWER + + RELEQ+RL+N+KM+LEN+R+ L ++ KELE Sbjct: 361 LEEQRLQIEVQAVYLAKQRLKWERFSKNKDRELEQMRLENEKMRLENKRLELEVRHKELE 420
Query: 269 VEYKR 255 +E K+ Sbjct: 421 LELKQ 425
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