BP914786 |
Clone id |
YMU001_000062_H03 |
Library |
YMU01 |
Length |
517 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_H03. |
Accession |
BP914786 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL417Contig1 |
Sequence |
TGCTTAGCAACATTCGTGACCTTCACATTCTTCAACAAAATGTGAGGGAATATGGCCTTA TGGTGATCTAGAGCCCCTACGATGTCCAGGCCTCTTGGACCTGCATCAAATTCGACAGCC ACTCCAAGCCATTTTCCGTTTTTTGCAAAAGAGACTTTCGCTTTGGATGGATTATCTAAA TCAACTGCACACATGATTATATCTCCAACACCAAAGACGCCTCCATAACCAGTGAAATCT CCACCATGTGAAAACTTCCCGGTTCCTCCATAGCCAAAACTAGTGCTGCTTTCACCAAGA CTGCCAACATCACTGTCACCTCTAGACAGACCCACTCTACAAAGGTTTTGCTGATCCTTG GCAGTATCCTCCATGATTACTTGCTGATTCTCAATCACTCGACATCCAAAACAGTACTTG CCTCCCTTCACACCAAAAGTTGCTCGTGCACCTGACCAGCAGTAGGCAAACCCTTTGTTG CACAGAGCGCTTCCAGTAATTCCATCTGATTCCACCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VDM6 |
Definition |
sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus |
Align length |
166 |
Score (bit) |
98.6 |
E-value |
2.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QYI0 |
Definition |
tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
170 |
Score (bit) |
191.0 |
E-value |
2.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914786|Adiantum capillus-veneris mRNA, clone: YMU001_000062_H03. (517 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, who... 191 2e-47 tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis... 191 2e-47 tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa ... 187 2e-46 tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0... 187 2e-46 tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subs... 187 2e-46 tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza... 187 2e-46 tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U... 181 1e-44 tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U... 181 1e-44 tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein U... 102 9e-21 tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio ... 102 9e-21 tr|A4FUC2|A4FUC2_BOVIN HNRNPUL1 protein OS=Bos taurus GN=HNRNPUL... 99 2e-19 tr|B7Z4B8|B7Z4B8_HUMAN cDNA FLJ56481, highly similar to Heteroge... 99 2e-19 tr|B3KMW7|B3KMW7_HUMAN cDNA FLJ12801 fis, clone NT2RP2002099, hi... 99 2e-19 tr|A8K3W4|A8K3W4_HUMAN cDNA FLJ75163, highly similar to Homo sap... 99 2e-19 tr|A7SN18|A7SN18_NEMVE Predicted protein (Fragment) OS=Nematoste... 98 2e-19 tr|A8K5K0|A8K5K0_HUMAN cDNA FLJ78309, highly similar to Homo sap... 98 3e-19 tr|B6KKR9|B6KKR9_TOXGO SPRY domain-containing protein OS=Toxopla... 97 5e-19 tr|A8K6U7|A8K6U7_HUMAN cDNA FLJ78252, highly similar to Homo sap... 96 1e-18 tr|Q4RFS1|Q4RFS1_TETNG Chromosome 16 SCAF15113, whole genome sho... 92 2e-17 tr|B7P318|B7P318_IXOSC E1b-55kD-associated protein, putative (Fr... 91 3e-17 tr|B6M8E1|B6M8E1_BRAFL Putative uncharacterized protein OS=Branc... 87 5e-16 tr|B6M8C5|B6M8C5_BRAFL Putative uncharacterized protein OS=Branc... 87 6e-16 tr|A7ST89|A7ST89_NEMVE Predicted protein (Fragment) OS=Nematoste... 86 1e-15 tr|B3SC93|B3SC93_TRIAD Putative uncharacterized protein OS=Trich... 85 2e-15 tr|A7SFI0|A7SFI0_NEMVE Predicted protein (Fragment) OS=Nematoste... 80 6e-14 tr|Q28Z53|Q28Z53_DROPS GA24297 OS=Drosophila pseudoobscura pseud... 77 4e-13 tr|B4GI97|B4GI97_DROPE GL16796 OS=Drosophila persimilis GN=GL167... 77 4e-13 tr|B3MDS7|B3MDS7_DROAN GF11942 OS=Drosophila ananassae GN=GF1194... 77 7e-13 tr|A8NWC9|A8NWC9_BRUMA ATP-dependent helicase DDX1, putative OS=... 72 2e-11 tr|B4P4B5|B4P4B5_DROYA GE13899 OS=Drosophila yakuba GN=GE13899 P... 71 4e-11
>tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009742001 PE=4 SV=1 Length = 489
Score = 191 bits (485), Expect = 2e-47 Identities = 94/170 (55%), Positives = 117/170 (68%), Gaps = 4/170 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCR 336 + DG+ GSAL + GFAYCWSGAR G+ GGKYCFGC++I Q V MEDT DQQ++CR Sbjct: 48 IVGDGLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCR 107
Query: 335 VGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAK 156 +G+SRGD VG+LGE+ SFG+GGTGKFS D I+CAV+L+ A Sbjct: 108 LGISRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLAS 167
Query: 155 VSFAKNGKWLGVAVEFDAGPRGLDIVGA----LDHHKAIFPHILLKNVKV 18 +SF+KNGKWLGVA EFDAG +GL +V + L A+FPH+LLKNV V Sbjct: 168 ISFSKNGKWLGVAKEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMV 217
>tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016567 PE=4 SV=1 Length = 1021
Score = 191 bits (485), Expect = 2e-47 Identities = 94/170 (55%), Positives = 117/170 (68%), Gaps = 4/170 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCR 336 + DG+ GSAL + GFAYCWSGAR G+ GGKYCFGC++I Q V MEDT DQQ++CR Sbjct: 215 IVGDGLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCR 274
Query: 335 VGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAK 156 +G+SRGD VG+LGE+ SFG+GGTGKFS D I+CAV+L+ A Sbjct: 275 LGISRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLAS 334
Query: 155 VSFAKNGKWLGVAVEFDAGPRGLDIVGA----LDHHKAIFPHILLKNVKV 18 +SF+KNGKWLGVA EFDAG +GL +V + L A+FPH+LLKNV V Sbjct: 335 ISFSKNGKWLGVAKEFDAGVKGLGVVDSPMRQLHWESALFPHVLLKNVMV 384
>tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0043L09.29 PE=4 SV=2 Length = 717
Score = 187 bits (476), Expect = 2e-46 Identities = 94/171 (54%), Positives = 117/171 (68%), Gaps = 5/171 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLC 339 V G+ G AL + GFAYCWSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LC Sbjct: 48 VGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLC 107
Query: 338 RVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKA 159 RVG+SRG VG+LGE+ SFG+GGTGKFSH D ++CAVDLD+ A Sbjct: 108 RVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLA 167
Query: 158 KVSFAKNGKWLGVAVEFDAGPRGLDI----VGALDHHKAIFPHILLKNVKV 18 + F++NG+WLG+A FDA +GL + V ++ AIFPH+LLKNV V Sbjct: 168 SIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAIFPHVLLKNVVV 218
>tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0410G08.12 PE=4 SV=1 Length = 717
Score = 187 bits (476), Expect = 2e-46 Identities = 94/171 (54%), Positives = 117/171 (68%), Gaps = 5/171 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLC 339 V G+ G AL + GFAYCWSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LC Sbjct: 48 VGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLC 107
Query: 338 RVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKA 159 RVG+SRG VG+LGE+ SFG+GGTGKFSH D ++CAVDLD+ A Sbjct: 108 RVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLA 167
Query: 158 KVSFAKNGKWLGVAVEFDAGPRGLDI----VGALDHHKAIFPHILLKNVKV 18 + F++NG+WLG+A FDA +GL + V ++ AIFPH+LLKNV V Sbjct: 168 SIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAIFPHVLLKNVVV 218
>tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subsp. japonica GN=Os04g0636000 PE=4 SV=1 Length = 717
Score = 187 bits (476), Expect = 2e-46 Identities = 94/171 (54%), Positives = 117/171 (68%), Gaps = 5/171 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLC 339 V G+ G AL + GFAYCWSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LC Sbjct: 48 VGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLC 107
Query: 338 RVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKA 159 RVG+SRG VG+LGE+ SFG+GGTGKFSH D ++CAVDLD+ A Sbjct: 108 RVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLA 167
Query: 158 KVSFAKNGKWLGVAVEFDAGPRGLDI----VGALDHHKAIFPHILLKNVKV 18 + F++NG+WLG+A FDA +GL + V ++ AIFPH+LLKNV V Sbjct: 168 SIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAIFPHVLLKNVVV 218
>tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015603 PE=4 SV=1 Length = 745
Score = 187 bits (476), Expect = 2e-46 Identities = 94/171 (54%), Positives = 117/171 (68%), Gaps = 5/171 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLC 339 V G+ G AL + GFAYCWSGARAT GV+GG KYCFGC+V+ Q V MEDTA DQQ+LC Sbjct: 76 VGGGGLRGEALHDGGFAYCWSGARATVGVRGGGKYCFGCKVVAEQAVEMEDTAADQQHLC 135
Query: 338 RVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKA 159 RVG+SRG VG+LGE+ SFG+GGTGKFSH D ++CAVDLD+ A Sbjct: 136 RVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVEYGVKFGVGDTVVCAVDLDSKPLA 195
Query: 158 KVSFAKNGKWLGVAVEFDAGPRGLDI----VGALDHHKAIFPHILLKNVKV 18 + F++NG+WLG+A FDA +GL + V ++ AIFPH+LLKNV V Sbjct: 196 SIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQWESAIFPHVLLKNVVV 246
>tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Zea mays PE=2 SV=1 Length = 625
Score = 181 bits (460), Expect = 1e-44 Identities = 90/171 (52%), Positives = 115/171 (67%), Gaps = 5/171 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLC 339 V G+ GSAL GFAYCWSGARAT G +GG +YCFGCR++ Q V M+ T +++LC Sbjct: 46 VGGGGLRGSALHEGGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLC 105
Query: 338 RVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKA 159 R+G+SRGD VG+LGES SFG+GGTGKFSH D ++CAVDLD+ A Sbjct: 106 RIGVSRGDDPVGALGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMA 165
Query: 158 KVSFAKNGKWLGVAVEFDAGPRGLDIVGA----LDHHKAIFPHILLKNVKV 18 + FA+NG+WLG+A FDAG +GL +V A + A+FPH+LLKNV V Sbjct: 166 SIGFARNGEWLGIARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIV 216
>tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Zea mays PE=2 SV=1 Length = 663
Score = 181 bits (460), Expect = 1e-44 Identities = 90/171 (52%), Positives = 115/171 (67%), Gaps = 5/171 (2%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGG-KYCFGCRVIENQQVIMEDTAKDQQNLC 339 V G+ GSAL GFAYCWSGARAT G +GG +YCFGCR++ Q V M+ T +++LC Sbjct: 46 VGGGGLRGSALHEGGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDPTTSGERHLC 105
Query: 338 RVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKA 159 R+G+SRGD VG+LGES SFG+GGTGKFSH D ++CAVDLD+ A Sbjct: 106 RIGVSRGDDPVGALGESQHSFGFGGTGKFSHQRRFVNYGVKFGVGDTVVCAVDLDSKPMA 165
Query: 158 KVSFAKNGKWLGVAVEFDAGPRGLDIVGA----LDHHKAIFPHILLKNVKV 18 + FA+NG+WLG+A FDAG +GL +V A + A+FPH+LLKNV V Sbjct: 166 SIGFARNGEWLGIARHFDAGEKGLGLVDAPLRPMRWGSALFPHVLLKNVIV 216
>tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein U-like 1 OS=Danio rerio GN=hnrnpul1 PE=2 SV=1 Length = 784
Score = 102 bits (255), Expect = 9e-21 Identities = 64/166 (38%), Positives = 90/166 (54%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCR 336 V D +G L +GFAY WSGARAT+GV G+ C+ +V E V +++ ++ R Sbjct: 214 VSPDHCSGYPLTIEGFAYLWSGARATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHVVR 273
Query: 335 VGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAK 156 VG S DS LGE + S+GYGGTGK S DII C +D D+ + + Sbjct: 274 VGWSL-DSCSTQLGEEAFSYGYGGTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVE 332
Query: 155 VSFAKNGKWLGVAVEFDAGPRGLDIVGALDHHKAIFPHILLKNVKV 18 ++F+KNGKWL VA ++ G +A+FPH+L+KN V Sbjct: 333 MAFSKNGKWLDVAFRVSKE----ELAG-----QALFPHVLVKNCAV 369
>tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio GN=hnrnpul1 PE=1 SV=1 Length = 784
Score = 102 bits (255), Expect = 9e-21 Identities = 64/166 (38%), Positives = 90/166 (54%) Frame = -3
Query: 515 VESDGITGSALCNKGFAYCWSGARATFGVKGGKYCFGCRVIENQQVIMEDTAKDQQNLCR 336 V D +G L +GFAY WSGARAT+GV G+ C+ +V E V +++ ++ R Sbjct: 214 VSPDHCSGYPLTIEGFAYLWSGARATYGVNKGRVCYELKVKEYISVKHLPSSEPDPHVVR 273
Query: 335 VGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXXXXXXXDIIMCAVDLDNPSKAK 156 VG S DS LGE + S+GYGGTGK S DII C +D D+ + + Sbjct: 274 VGWSL-DSCSTQLGEEAFSYGYGGTGKKSTNYKFGDYGEKFGEGDIIGCYIDFDSHEQVE 332
Query: 155 VSFAKNGKWLGVAVEFDAGPRGLDIVGALDHHKAIFPHILLKNVKV 18 ++F+KNGKWL VA ++ G +A+FPH+L+KN V Sbjct: 333 MAFSKNGKWLDVAFRVSKE----ELAG-----QALFPHVLVKNCAV 369
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