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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914808
Clone id YMU001_000063_B02
Library
Length 596
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGGCCTGATATTCAAAGTGACACCTTCATGATCAACACATTCCATGCTAGCGGCATTTTT
TGAAGGACTTCCATTTGGATCTGCCATTGATGGTTCATGTAAAACCGCGGTCTGAACCAC
AAAATGCTCTCTAGCTTCAAAATTTCCCTCAGCTGAATTGAGAACTATAGCGCTCTCAGG
AGACTTCAACGACTCCAAAGGAGTATTGAACCCCCCTTTCCCACTGTCAACATAGCAGTT
CAATTGCGGCAGGTCATCTATCTCACCATGTCCAGCAATTCATTCCTCTATACCAACTAC
ATGTGCAGGCTTAGGCAGTTCAGCGTCAGTTTCCTGCAATACATGAGAGCCCTTCTGACC
AAGAGCAAGATCATCATCAGGCACGTCCTCATACATCTCTTCACTTTTGTCAACAGTTGA
TTCAACAATGGGAGCAGGAGCTTCAGGGCAATTTGCCTCGACCAAATTACATAACCCTTC
ATCTGAAGTCTTCACCTTGGCATGAGAAACTAAGGCCTTTCTGTAGTACACAGCAGGCCT
GACATGGCGCTTGGTCCTCTTCACACGAAGACGCACCTGCCTGGCAAATTCGATTA
■■Homology search results ■■ -
sp_hit_id Q9W539
Definition sp|Q9W539|HR4_DROME Hormone receptor 4 OS=Drosophila melanogaster
Align length 50
Score (bit) 34.7
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914808|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_B02.
         (596 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9W539|HR4_DROME Hormone receptor 4 OS=Drosophila melanogaste...    35   0.37 
sp|Q7M712|TR110_MOUSE Taste receptor type 2 member 110 OS=Mus mu...    33   0.83 
sp|Q9BXX3|AN30A_HUMAN Ankyrin repeat domain-containing protein 3...    32   2.4  
sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanog...    31   4.1  
sp|Q83CA6|DAPA_COXBU Dihydrodipicolinate synthase OS=Coxiella bu...    31   4.1  
sp|A9NDT3|DAPA_COXBR Dihydrodipicolinate synthase OS=Coxiella bu...    31   4.1  
sp|A9KFS0|DAPA_COXBN Dihydrodipicolinate synthase OS=Coxiella bu...    31   4.1  
sp|P06719|KNOB_PLAFN Knob-associated histidine-rich protein OS=P...    31   5.4  
sp|P09346|KNOB_PLAFG Knob-associated histidine-rich protein OS=P...    30   7.1  
sp|P13817|KNOB_PLAFA Knob-associated histidine-rich protein (Fra...    30   7.1  
sp|Q6ZWJ8|CRIM2_HUMAN Cysteine-rich motor neuron 2 protein OS=Ho...    30   9.2  
sp|Q9QWF0|CAF1A_MOUSE Chromatin assembly factor 1 subunit A OS=M...    30   9.2  

>sp|Q9W539|HR4_DROME Hormone receptor 4 OS=Drosophila melanogaster
           GN=Hr4 PE=1 SV=4
          Length = 1518

 Score = 34.7 bits (78), Expect = 0.37
 Identities = 20/50 (40%), Positives = 25/50 (50%)
 Frame = +3

Query: 240 SIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARP 389
           ++   HLS H QQ  PL Q H Q    Q+Q    H     Q+Q HHQ +P
Sbjct: 537 NVGQRHLSPHHQQQSPLLQHHQQQ-QQQQQQQQQHLHQQQQQQQHHQQQP 585


>sp|Q7M712|TR110_MOUSE Taste receptor type 2 member 110 OS=Mus
           musculus GN=Tas2r110 PE=2 SV=1
          Length = 333

 Score = 33.5 bits (75), Expect = 0.83
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +1

Query: 214 PFPTVNIAVQLRQVIYLTMSSNSFLYTNYMCRLRQFSVSFLQYMRALLT 360
           PFPT+++ +   +V  +T SS+ FL  N +  L  F+VS + ++  + +
Sbjct: 177 PFPTISLFINSSKVFVITNSSHIFLPINSLFMLIPFTVSLVAFLMLIFS 225


>sp|Q9BXX3|AN30A_HUMAN Ankyrin repeat domain-containing protein 30A
           OS=Homo sapiens GN=ANKRD30A PE=1 SV=3
          Length = 1397

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = -3

Query: 546 HVRPAVYYRKALVSHAKVKTSDEGLCNLVEANCPEAPAPIVESTVDKSEEMYEDVPDDDL 367
           H +   Y RK   +H    T+ EG      A  P+  AP+ E T D +E + E  PD+  
Sbjct: 254 HEQIMEYIRKLSKNHQN--TNPEG----TSAGTPDEAAPLAERTPDTAESLVEKTPDEAA 307

Query: 366 ALGQKGSHVLQETDAELPKPA 304
            L ++     +    + P  A
Sbjct: 308 PLVERTPDTAESLVEKTPDEA 328



 Score = 30.8 bits (68), Expect = 5.4
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -3

Query: 468 NLVEANCPEAPAPIVESTVDKSEEMYEDVPDDDLALGQKGSHVLQ 334
           +LVE   P+  AP+VE T D +E + E  PD+  +L +  S  +Q
Sbjct: 297 SLVEKT-PDEAAPLVERTPDTAESLVEKTPDEAASLVEGTSDKIQ 340


>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila
           melanogaster GN=det PE=1 SV=1
          Length = 1854

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
 Frame = -3

Query: 213 GFNTPLESLKSPESAIVLNSAEGNFEAREHFVVQTAVLHE----------------PSMA 82
           G    + + + P+S+I+ +S+ G  E REH +V +   H+                PS A
Sbjct: 614 GQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSEDLQALSPSKA 673

Query: 81  DPNGSPSKNAASMECVDHEGVTLNIR 4
            P+ + S +  S+       +T  +R
Sbjct: 674 IPSSASSNSLKSLAANGGSSLTTELR 699


>sp|Q83CA6|DAPA_COXBU Dihydrodipicolinate synthase OS=Coxiella
           burnetii GN=dapA PE=3 SV=1
          Length = 289

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -3

Query: 258 DDLPQLNCYVDSGKGGFNTPLESLKSPESAIVLNSAEGNFEAREHFVVQTAVLHEPSMAD 79
           DD   ++  +  GKG  +     +  P  A  + +  GN E  +    Q + L++    +
Sbjct: 184 DDKTAMDFMLAGGKGVISVVANVVPKPYHAFCITAVSGNVELAKKENDQLSPLYDSLFVE 243

Query: 78  PNGSPSKNAASMECVDHEGVTLNIRP 1
            N  P K A S   V  +G+ L + P
Sbjct: 244 SNPIPVKWALSQMGVIPKGIRLPLTP 269


>sp|A9NDT3|DAPA_COXBR Dihydrodipicolinate synthase OS=Coxiella
           burnetii (strain RSA 331 / Henzerling II) GN=dapA PE=3
           SV=1
          Length = 289

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -3

Query: 258 DDLPQLNCYVDSGKGGFNTPLESLKSPESAIVLNSAEGNFEAREHFVVQTAVLHEPSMAD 79
           DD   ++  +  GKG  +     +  P  A  + +  GN E  +    Q + L++    +
Sbjct: 184 DDKTAMDFMLAGGKGVISVVANVVPKPYHAFCITAVSGNVELAKKENDQLSPLYDSLFVE 243

Query: 78  PNGSPSKNAASMECVDHEGVTLNIRP 1
            N  P K A S   V  +G+ L + P
Sbjct: 244 SNPIPVKWALSQMGVIPKGIRLPLTP 269


>sp|A9KFS0|DAPA_COXBN Dihydrodipicolinate synthase OS=Coxiella
           burnetii (strain Dugway 5J108-111) GN=dapA PE=3 SV=1
          Length = 289

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -3

Query: 258 DDLPQLNCYVDSGKGGFNTPLESLKSPESAIVLNSAEGNFEAREHFVVQTAVLHEPSMAD 79
           DD   ++  +  GKG  +     +  P  A  + +  GN E  +    Q + L++    +
Sbjct: 184 DDKTAMDFMLAGGKGVISVVANVVPKPYHAFCITAVSGNVELAKKENDQLSPLYDSLFVE 243

Query: 78  PNGSPSKNAASMECVDHEGVTLNIRP 1
            N  P K A S   V  +G+ L + P
Sbjct: 244 SNPIPVKWALSQMGVIPKGIRLPLTP 269


>sp|P06719|KNOB_PLAFN Knob-associated histidine-rich protein
           OS=Plasmodium falciparum (isolate NF7 / Ghana) GN=SD17
           PE=4 SV=1
          Length = 657

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 17/57 (29%), Positives = 22/57 (38%)
 Frame = +3

Query: 222 HCQHSSSIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARPH 392
           H QH +   A H +HH          H     V  Q P +H+    Q+Q HH    H
Sbjct: 72  HHQHQAPHQAPHQAHH----------HHHHGEVNHQAPQVHQQVHGQDQAHHHHHHH 118


>sp|P09346|KNOB_PLAFG Knob-associated histidine-rich protein
           OS=Plasmodium falciparum (isolate FCR-3 / Gambia) PE=2
           SV=1
          Length = 634

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 17/57 (29%), Positives = 21/57 (36%)
 Frame = +3

Query: 222 HCQHSSSIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARPH 392
           H QH     A H +HH          H     V  Q P +H+    Q+Q HH    H
Sbjct: 68  HHQHQHQHQAPHQAHH----------HHHHGEVNHQAPQVHQQVHGQDQAHHHHHHH 114


>sp|P13817|KNOB_PLAFA Knob-associated histidine-rich protein
           (Fragment) OS=Plasmodium falciparum PE=2 SV=1
          Length = 473

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 17/57 (29%), Positives = 21/57 (36%)
 Frame = +3

Query: 222 HCQHSSSIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARPH 392
           H QH     A H +HH          H     V  Q P +H+    Q+Q HH    H
Sbjct: 68  HHQHQHQHQAPHQAHH----------HHHHGEVNHQAPQVHQQVHGQDQAHHHHHHH 114
tr_hit_id Q17M14
Definition tr|Q17M14|Q17M14_AEDAE Ras GTP exchange factor, son of sevenless OS=Aedes aegypti
Align length 58
Score (bit) 40.8
E-value 0.059
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914808|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_B02.
         (596 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q17M14|Q17M14_AEDAE Ras GTP exchange factor, son of sevenless...    41   0.059
tr|B4JM27|B4JM27_DROGR GH24405 OS=Drosophila grimshawi GN=GH2440...    39   0.17 
tr|B4R330|B4R330_DROSI GD16580 OS=Drosophila simulans GN=GD16580...    38   0.50 
tr|B6DTD9|B6DTD9_9EUGL RNA-binding protein OS=Bodo saltans PE=4 ...    37   0.86 
tr|B3P8U2|B3P8U2_DROER GG12896 OS=Drosophila erecta GN=GG12896 P...    37   0.86 
tr|A7PKG7|A7PKG7_VITVI Chromosome chr15 scaffold_19, whole genom...    36   1.9  
tr|Q0D1D1|Q0D1D1_ASPTN Predicted protein OS=Aspergillus terreus ...    36   1.9  
tr|B4NBH0|B4NBH0_DROWI GK11895 OS=Drosophila willistoni GN=GK118...    33   9.5  

>tr|Q17M14|Q17M14_AEDAE Ras GTP exchange factor, son of sevenless
            OS=Aedes aegypti GN=AAEL001165 PE=4 SV=1
          Length = 1553

 Score = 40.8 bits (94), Expect = 0.059
 Identities = 22/58 (37%), Positives = 29/58 (50%)
 Frame = +3

Query: 231  HSSSIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARPHTSLH 404
            HSSS +  H  HH QQ +  YQ H Q     + +P  H+S   Q+Q+HH    H   H
Sbjct: 1103 HSSSSSQHHQYHHHQQQMYNYQHHSQ--GSMQYYPGHHQSGGGQQQNHHHYNHHGHQH 1158


>tr|B4JM27|B4JM27_DROGR GH24405 OS=Drosophila grimshawi GN=GH24405
            PE=4 SV=1
          Length = 1622

 Score = 39.3 bits (90), Expect = 0.17
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = +3

Query: 219  SHCQHSSSIAAGHLSHHVQQFIPLYQLHVQA*AV--QRQFPAIHESPSDQEQD-----HH 377
            +H  H+ ++A  H  HH  Q + L +L + A     Q QF A+H +P  Q+Q      HH
Sbjct: 1225 AHAHHAHTLAHHHQQHHQHQ-LALEELTLAANCQFPQGQFYALHHNPQQQQQQQQQHHHH 1283

Query: 378  QARPHTSLHF 407
               PH  L F
Sbjct: 1284 HHNPHQHLSF 1293


>tr|B4R330|B4R330_DROSI GD16580 OS=Drosophila simulans GN=GD16580
           PE=4 SV=1
          Length = 1340

 Score = 37.7 bits (86), Expect = 0.50
 Identities = 20/50 (40%), Positives = 25/50 (50%)
 Frame = +3

Query: 240 SIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARP 389
           ++   HLS H QQ  PL Q H Q    Q+Q    H     Q+Q HHQ +P
Sbjct: 602 NVGQRHLSPHHQQQSPLLQHHQQQQQQQQQQQQQHLHQQQQQQQHHQQQP 651


>tr|B6DTD9|B6DTD9_9EUGL RNA-binding protein OS=Bodo saltans PE=4
           SV=1
          Length = 723

 Score = 37.0 bits (84), Expect = 0.86
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = +3

Query: 222 HCQHSSSIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARPHTSL 401
           H  HSSS   GH  HH      L Q   Q   + +Q P   +  +     HHQ++P  SL
Sbjct: 363 HYHHSSSFLGGHNDHHHHNQYHLNQQQQQLQHLHQQSPWAAQPAAHHHHHHHQSQPPPSL 422


>tr|B3P8U2|B3P8U2_DROER GG12896 OS=Drosophila erecta GN=GG12896 PE=4
           SV=1
          Length = 1529

 Score = 37.0 bits (84), Expect = 0.86
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +3

Query: 240 SIAAGHLSHHVQQFIPLYQLHVQA*AVQRQFPAIHESPSDQEQDHHQARP 389
           ++   HLS H QQ  PL Q H Q    Q+Q   +H+    Q+Q HHQ +P
Sbjct: 539 NVGQRHLSPHHQQQSPLLQHHQQQQQQQQQQQHLHQ--QQQQQQHHQQQP 586


>tr|A7PKG7|A7PKG7_VITVI Chromosome chr15 scaffold_19, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019163001
           PE=4 SV=1
          Length = 130

 Score = 35.8 bits (81), Expect = 1.9
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +3

Query: 480 HLKSSPWHEKLRPFCSTQ 533
           HLKS PW+ KLRPFC+ Q
Sbjct: 66  HLKSGPWNHKLRPFCAEQ 83


>tr|Q0D1D1|Q0D1D1_ASPTN Predicted protein OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_00253 PE=4 SV=1
          Length = 216

 Score = 35.8 bits (81), Expect = 1.9
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -3

Query: 507 SHAKVKTSDEGLCNLVEANCPEAPAPIVESTVDKSEEMYEDVPDDDLALGQKGSHVLQET 328
           S ++   SD+ +   V    P A       + D+ E+   D  D D A G++  H  Q+T
Sbjct: 95  SESEESESDDAVSTTVTVPTPAAQVDEPGDSTDREEDGSSD--DSDSAAGEEADHQPQQT 152

Query: 327 DAELPKPAHV 298
           +AE   P HV
Sbjct: 153 EAEPKDPGHV 162


>tr|B4NBH0|B4NBH0_DROWI GK11895 OS=Drosophila willistoni GN=GK11895
            PE=4 SV=1
          Length = 4825

 Score = 33.5 bits (75), Expect = 9.5
 Identities = 27/100 (27%), Positives = 44/100 (44%)
 Frame = -3

Query: 444  EAPAPIVESTVDKSEEMYEDVPDDDLALGQKGSHVLQETDAELPKPAHVVXXXXXXXXXX 265
            E P P++  ++  S  + E + DD L +G  G+   Q T  E  +   VV          
Sbjct: 3922 ETPLPVMSQSLTDSSTLNE-LDDDSLGIGM-GTSQTQPTTTEESEALTVVTSPLDTSSPQ 3979

Query: 264  XIDDLPQLNCYVDSGKGGFNTPLESLKSPESAIVLNSAEG 145
             +D    L   + SGK   +TP  S + P+++ V  S+ G
Sbjct: 3980 VLDHFASL---LASGKADGSTPSSSEQQPKTSTVTTSSSG 4016