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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914818
Clone id YMU001_000063_B12
Library
Length 470
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGACATGATACGGAGATATTACCTGCAGGTACTCCCACTACACTTTTAATCATAAAAAC
TATAAGCCTGACAGTATCTTAACAGCCCTTGCAAGTGCGAGATGGGGCTCCATAGCGGCT
CTCAACCATGCACATAAACCCATCAAAAACCATTTCAATCAAGAGCTATACAAAAACTGA
TGATGTTCAGTCAAACTCAAGAAAAAAGCATGGTGGACATAGGGAAACACTCTCCCGTTC
ACAACAATAACAAAGAGCTTTTACTGCCAAATCAGGGTCGCAGATACATGGGTACAAGGG
AGCTCCGCTTCATGCAGCTTCCATCTCTAAAAAACAAGACGAGGGGTGAAAGTGCAGAGG
TCACCATCTATGTTAATGGCCTTGTTGATGAGAGACACTCTCCAAGCAAGGCTCCAGGCC
CTCGCACACACACACGGGCACCTCGACCACAACTCCTACGCACCATCGCA
■■Homology search results ■■ -
sp_hit_id P53739
Definition sp|P53739|KN8R_YEAST Probable serine/threonine-protein kinase YNR047W OS=Saccharomyces cerevisiae
Align length 88
Score (bit) 33.5
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914818|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_B12.
         (470 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53739|KN8R_YEAST Probable serine/threonine-protein kinase YN...    33   0.48 
sp|Q54VN0|Y6463_DICDI Putative uncharacterized protein DDB_G0280...    31   3.1  
sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsi...    31   3.1  
sp|P19147|PPB_SERMA Alkaline phosphatase OS=Serratia marcescens ...    30   5.3  
sp|Q9NVL1|FA86C_HUMAN Protein FAM86C OS=Homo sapiens GN=FAM86C P...    30   5.3  
sp|P0C1X1|CXK4A_CONMA Kappa-A-conotoxin MIVA OS=Conus magus PE=1...    30   6.9  
sp|P38621|ZN12_MICSA Zinc finger protein ZFMSA12A OS=Micropterus...    29   9.1  
sp|P00634|PPB_ECOLI Alkaline phosphatase OS=Escherichia coli (st...    29   9.1  
sp|Q69422|POLG_GBVB Genome polyprotein OS=Hepatitis GB virus B P...    29   9.1  
sp|Q6ZRI0|OTOGL_HUMAN Otogelin OS=Homo sapiens GN=OTOG PE=2 SV=3       29   9.1  

>sp|P53739|KN8R_YEAST Probable serine/threonine-protein kinase
           YNR047W OS=Saccharomyces cerevisiae GN=YNR047W PE=1 SV=1
          Length = 893

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +2

Query: 86  PLQVRDGAP*RLS-TMHINPSKTISIKSYTKTDDVQSNSRKKHGGHRETLSRSQQ*QRAF 262
           P   R G   R S +  I PS+  +  S T    ++ N+ + H G +   S +   +RA 
Sbjct: 186 PTVARTGTGRRRSPSTPIMPSQNSNNSSSTSA--IRPNNYRHHSGSQGFSSNNPFRERAG 243

Query: 263 TAKSGSQIHGYKGAPLHAASISKKQDEG 346
           T +S +    Y+G P HA S S   DEG
Sbjct: 244 TVRSSNPYFAYQGLPTHAMS-SHDLDEG 270


>sp|Q54VN0|Y6463_DICDI Putative uncharacterized protein DDB_G0280241
           OS=Dictyostelium discoideum GN=DDB_G0280241 PE=4 SV=1
          Length = 210

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 240 HNNNKELLLPNQGRRYMGTRELRFMQLP-SLKNKTRGESAEVTIYVNGLVDERHSP 404
           +NNNK  +LPN         E  F+ +P SLK+ T  +S +  I +  L ++ HSP
Sbjct: 149 NNNNKSFILPN-------LNEDLFLNIPDSLKDLTNEKSIQENITLPTLENDLHSP 197


>sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsis
           thaliana GN=SF2 PE=1 SV=1
          Length = 303

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
 Frame = +3

Query: 240 HNNNKELLLPNQGRRYMGTREL---RFMQLPSLKNKTRGESAEVTIYVNGLVDERHSPSK 410
           +++ K+   P++GR Y  +R     R +     ++++R  S +           R SP+K
Sbjct: 195 YDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAK-------SSRRSPAK 247

Query: 411 A----PGPRTHTRAPRPQLLRT 464
           +    PGPR+ +R+P P+  R+
Sbjct: 248 STSRSPGPRSKSRSPSPRRSRS 269


>sp|P19147|PPB_SERMA Alkaline phosphatase OS=Serratia marcescens
           GN=phoA PE=3 SV=1
          Length = 475

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 19  ITCRYSHYTFNHKNYKPDSILTALASA 99
           +T +Y+HY+ + K +KPD +  + ASA
Sbjct: 106 LTGQYTHYSLDRKTHKPDYVTDSAASA 132


>sp|Q9NVL1|FA86C_HUMAN Protein FAM86C OS=Homo sapiens GN=FAM86C PE=2
           SV=1
          Length = 165

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 231 SPVHNNNKELLLPNQGRRYMGTRELRFMQLPSLKNKTRGES 353
           +P  N+  ELLL +  RR++  R LR     SL+ K R  S
Sbjct: 2   APEENSGSELLLQSFKRRFLAARALRSFPWQSLEAKLRDSS 42


>sp|P0C1X1|CXK4A_CONMA Kappa-A-conotoxin MIVA OS=Conus magus PE=1
           SV=1
          Length = 79

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 276 PDLAVKALCYCCERESVSLCPPC 208
           P+L V A   CC    +++CPPC
Sbjct: 40  PELVVTATTNCCGYNPMTICPPC 62


>sp|P38621|ZN12_MICSA Zinc finger protein ZFMSA12A OS=Micropterus
           salmoides PE=2 SV=1
          Length = 415

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
 Frame = +3

Query: 144 QKPFQSRAIQKLMMFSQTQ----EKSMVDIGKHSPVHNNNKELLLPNQGRRYMGTRELRF 311
           Q+ F+ + +  +  F  +Q     K M  +GKH   H  N+       G+ Y G  ELR 
Sbjct: 147 QEKFRHQCVHSVQKFDCSQCGKSFKKMHLLGKHELTHTQNRIFTCRQCGKVYPGMSELRS 206

Query: 312 MQL---PSLKNK 338
            Q    P L N+
Sbjct: 207 HQKIHPPELSNQ 218


>sp|P00634|PPB_ECOLI Alkaline phosphatase OS=Escherichia coli
           (strain K12) GN=phoA PE=1 SV=1
          Length = 471

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 19  ITCRYSHYTFNHKNYKPDSILTALASA 99
           +T +Y+HY  N K  KPD +  + ASA
Sbjct: 102 LTGQYTHYALNKKTGKPDYVTDSAASA 128


>sp|Q69422|POLG_GBVB Genome polyprotein OS=Hepatitis GB virus B PE=1
           SV=1
          Length = 2864

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -3

Query: 336 CFLEMEAA*SGAPLYPCICDPDLAVKALCYCCERESVSLCPP 211
           C L +    SGA     + DPD     L  CC+R  V  C P
Sbjct: 146 CLLSLACPCSGAR----VTDPDTNTTILTNCCQRNQVIYCSP 183


>sp|Q6ZRI0|OTOGL_HUMAN Otogelin OS=Homo sapiens GN=OTOG PE=2 SV=3
          Length = 2925

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = -3

Query: 354  HFHPSSCFLEMEAA*SGAPLYPCICDPDLAVKALCYCCERESV 226
            HF   SC           P Y C CDPDL    L   C ++ +
Sbjct: 2528 HFQEDSC----------CPSYSCECDPDLCEAELVPSCRQDQI 2560
tr_hit_id B6QUB6
Definition tr|B6QUB6|B6QUB6_PENMA RNA exonuclease Rex3, putative OS=Penicillium marneffei ATCC 18224
Align length 137
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914818|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_B12.
         (470 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6QUB6|B6QUB6_PENMA RNA exonuclease Rex3, putative OS=Penicil...    35   1.9  
tr|B3MY06|B3MY06_DROAN GF19551 OS=Drosophila ananassae GN=GF1955...    34   4.2  
tr|B7FUJ8|B7FUJ8_PHATR Predicted protein OS=Phaeodactylum tricor...    33   5.5  
tr|B3LPJ6|B3LPJ6_YEAS1 Putative uncharacterized protein OS=Sacch...    33   5.5  
tr|A6ZSC1|A6ZSC1_YEAS7 Conserved protein OS=Saccharomyces cerevi...    33   5.5  
tr|B6MRR0|B6MRR0_BRAFL Putative uncharacterized protein OS=Branc...    33   9.3  

>tr|B6QUB6|B6QUB6_PENMA RNA exonuclease Rex3, putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_007030 PE=4
           SV=1
          Length = 592

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 14/137 (10%)
 Frame = +3

Query: 96  CEMGLHSGSQPCT*THQKPFQSRAIQKLMMFSQTQEKSMVDIGKHSPVHNNN----KELL 263
           C  G H     C   HQ P +   +Q++    QT++       K   VH ++    K  +
Sbjct: 13  CPEGSHCALLNCIFLHQDP-KIEQVQQIPRLGQTEDVREPAEKKRKLVHEHDGQPRKTTV 71

Query: 264 LPNQGRRYMGTRELRFMQLPSLKNKTRG----------ESAEVTIYVNGLVDERHSPSKA 413
            P Q R+   T       LPS++ K             +S   T  V GL  +R +P ++
Sbjct: 72  QPGQHRQ---TAPKEIKDLPSVRRKVSPPPVRPQEKPIKSPATTTTVTGLSLKRKAPKES 128

Query: 414 PGPRTHTRAPRPQLLRT 464
             PR   +AP    +R+
Sbjct: 129 LNPRLLKKAPATHSVRS 145


>tr|B3MY06|B3MY06_DROAN GF19551 OS=Drosophila ananassae GN=GF19551
           PE=4 SV=1
          Length = 279

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
 Frame = +3

Query: 141 HQKPFQSRAIQKLMMFSQTQEKSMVDIGKHSPVHNNNKELLLPNQGRRYMGTRELRFMQL 320
           HQK FQ+R +Q       +   + +    +   HNNN      N  R +M   + +    
Sbjct: 76  HQKQFQTRQLQAHHWQHISNNNNNIHKNNN---HNNNNNY---NNNRNFMDGLKSKSAAA 129

Query: 321 PSLKNKTRGESAEVTIYVNGLVDERHSPSKAPGPRTH-TRAPRPQLLR 461
            S+KN+ +  ++  T+     + ++H    AP P     R  RP  LR
Sbjct: 130 TSIKNQQKSATSPATLQQQLQLQQQHRRRVAPSPLPRPPRRTRPLPLR 177


>tr|B7FUJ8|B7FUJ8_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_44576 PE=4 SV=1
          Length = 1058

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +2

Query: 128 MHINPSKTISI-KSYT--KTDDVQSNSRKKHGGHRETLSRSQQ*QRAFTAKSGSQIHGYK 298
           +H    K ++I KS T  KTD + ++S+  H   R   +R    + + T++SGSQI   K
Sbjct: 226 LHTEELKNLNIEKSPTNCKTDSLGASSQTDHSIIRIAETRDIVIEESETSRSGSQIGSKK 285

Query: 299 GAPLHAASISKKQ 337
            + L+ +S+ +KQ
Sbjct: 286 SSDLYLSSLPEKQ 298


>tr|B3LPJ6|B3LPJ6_YEAS1 Putative uncharacterized protein
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_03095 PE=4 SV=1
          Length = 893

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +2

Query: 86  PLQVRDGAP*RLS-TMHINPSKTISIKSYTKTDDVQSNSRKKHGGHRETLSRSQQ*QRAF 262
           P   R G   R S +  I PS+  +  S T    ++ N+ + H G +   S +   +RA 
Sbjct: 186 PTVARTGTGRRRSPSTPIMPSQNSNNSSSTSA--IRPNNYRHHSGSQGFSSNNPFRERAG 243

Query: 263 TAKSGSQIHGYKGAPLHAASISKKQDEG 346
           T +S +    Y+G P HA S S   DEG
Sbjct: 244 TVRSSNPYFAYQGLPTHAMS-SHDLDEG 270


>tr|A6ZSC1|A6ZSC1_YEAS7 Conserved protein OS=Saccharomyces
           cerevisiae (strain YJM789) GN=SCY_4832 PE=4 SV=1
          Length = 893

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +2

Query: 86  PLQVRDGAP*RLS-TMHINPSKTISIKSYTKTDDVQSNSRKKHGGHRETLSRSQQ*QRAF 262
           P   R G   R S +  I PS+  +  S T    ++ N+ + H G +   S +   +RA 
Sbjct: 186 PTVARTGTGRRRSPSTPIMPSQNSNNSSSTSA--IRPNNYRHHSGSQGFSSNNPFRERAG 243

Query: 263 TAKSGSQIHGYKGAPLHAASISKKQDEG 346
           T +S +    Y+G P HA S S   DEG
Sbjct: 244 TVRSSNPYFAYQGLPTHAMS-SHDLDEG 270


>tr|B6MRR0|B6MRR0_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_124310 PE=4 SV=1
          Length = 1142

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
 Frame = +3

Query: 150  PFQSRAI--QKLMMFSQTQEKSMVDIGKHSPVHNNNKELLLPNQGRRYMGTRELRFMQLP 323
            P+ SRA+  Q+  M  Q +EK    +GK   +        +PN     M  R+L   +  
Sbjct: 940  PYTSRALEAQQHAMLQQQEEK----LGK---LRQGGLASEMPN-----MNPRDLGLQRGD 987

Query: 324  SLKNKTRGESAEVTIYVNG-------LVDERHSPSKAPGPRTHTRAPRPQLL 458
             L  K+  ES    I +NG       ++DER  P+     R   ++P P LL
Sbjct: 988  DLSRKSLLESESAFIDLNGEATFPPDMIDERKGPTARERRRQQRKSPSPHLL 1039