BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914822|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_C04.
         (552 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9QZW0|AT11C_MOUSE Probable phospholipid-transporting ATPase ...    32   2.1  
sp|Q97IC4|RLMN_CLOAB Ribosomal RNA large subunit methyltransfera...    31   4.6  

>sp|Q9QZW0|AT11C_MOUSE Probable phospholipid-transporting ATPase 11C
            OS=Mus musculus GN=Atp11c PE=1 SV=2
          Length = 1129

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 25/75 (33%), Positives = 34/75 (45%)
 Frame = -1

Query: 507  VEHFKHYGSRS*YHIYSCFKDSPFWHH*GISWPFKAASRIH*PLNLAY*QALVSSAQ*MC 328
            + HF  +GS + Y  +S F     W   GI WPF    R++              AQ +C
Sbjct: 1021 INHFVIWGSLAFYVFFSFF-----WG--GIIWPFLKQQRMY-----------FVFAQMLC 1062

Query: 327  SLQRSLACILLLFFS 283
            S+   LA ILL+F S
Sbjct: 1063 SVSTWLAIILLIFIS 1077


>sp|Q97IC4|RLMN_CLOAB Ribosomal RNA large subunit methyltransferase
           N OS=Clostridium acetobutylicum GN=rlmN PE=3 SV=1
          Length = 345

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 61  GQRFLMCSYVMIKQNIVDRVKSLLHFSYVYQLHESDDEKELKV-PIAD 201
           GQR +  S   I   I D +K  L  +    LH SDDE   K+ PIA+
Sbjct: 182 GQRHITLSTCGIVPRIYDLMKENLQITLAISLHASDDETRKKIMPIAN 229

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914822|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_C04.
         (552 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RLC3|A9RLC3_PHYPA Predicted protein OS=Physcomitrella paten...    34   4.6  
tr|A8HMN2|A8HMN2_CHLRE Predicted protein OS=Chlamydomonas reinha...    34   6.0  

>tr|A9RLC3|A9RLC3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_67663 PE=4 SV=1
          Length = 498

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 264 TTSTPSKPAHPPVCANCSS 208
           TTSTPS+P HPP C N +S
Sbjct: 366 TTSTPSEPVHPPTCYNTTS 384


>tr|A8HMN2|A8HMN2_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_171992 PE=4 SV=1
          Length = 981

 Score = 33.9 bits (76), Expect = 6.0
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -1

Query: 327 SLQRSLACILLLFFSSWQRSCTTSTPSKPAHPPVCANCSS 208
           +L+RS+AC+LLL F    ++     P  PA PP  A+CSS
Sbjct: 5   NLKRSIACMLLLAFLIGAQAIAAPPPGVPA-PPDAADCSS 43