BP914832
Clone id YMU001_000063_D05
Library
Length 483
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACCGACCTCCCCAAGCTATGATGAACAAAGTCAACCCATGTACCTGTGCAAAACAGGTAC
AATATCCATCATGGTCGTCCACCCAAGTGGGTCATAGTAGAGAATGTGGTTCTTTCTCTT
ACGTAGCCCAGCAATCTTTGCATGTGTGGCAAGATACATAACACAACATGTCCAATGCTC
CCTGTTGCAAAGAGAGACAACATCAGCATGTCAATGAGAAGCCATAATGTAGCATACCTA
GCAGCCCTTTGTCCTCTCCTTACAAACCACCTGTAAATGATTAGAAAAAATGTAAGCACG
CATTCACCAAAGTCCCTCTCCCCGAAGAAGTTATGTAAGACCCGCATGGAATCTTGCCTG
CCCAAAGTCGCATCCACAACAGAATATCACATAGAGTCCACAAGCATCACTTGCATGAGG
ATATCTGAGCCTAGCGTGTACTCCATCCACCTGTAAAAGTGAGTATGTTAAGCACATGCT
TGC
■■Homology search results ■■ -
sp_hit_id Q4V8I3
Definition sp|Q4V8I3|TENS4_RAT Tensin-4 OS=Rattus norvegicus
Align length 43
Score (bit) 30.8
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914832|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_D05.
(483 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4V8I3|TENS4_RAT Tensin-4 OS=Rattus norvegicus GN=Tns4 PE=2 SV=1 31 3.4

>sp|Q4V8I3|TENS4_RAT Tensin-4 OS=Rattus norvegicus GN=Tns4 PE=2 SV=1
Length = 718

Score = 30.8 bits (68), Expect = 3.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1

Query: 100 ENVVLSLT*PSNLCMCGKIHNTTCPMLPVAKRDNISMSMRSHN 228
++V T PS+LC K H+ T P +P+ ++ + +SH+
Sbjct: 376 DSVQSRATSPSHLCQATKSHSKTLPDVPLTSPSHLCQATKSHS 418


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914832|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_D05.
(483 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******