BP914833
Clone id YMU001_000063_D06
Library
Length 431
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGAAACCCCTCATTTGTATTGGAGCGGTGGCACTGGGTCAAAGGATGTTCAGAGGGTGG
TTCAAAGCGGGTCCGACGTATTTGCACGATTCGCTGCCTTGAACGTCTGCTCAAAGGAGA
ATATTGCCAGACTTCTATCACTTTATCAGATTTGCAATAGGCTAAACACTGCAAAGCGCA
TCTGTGCTACCAAAATGAGGTAAACATTGTCTGCGGTCTGGCCAAGCGAGGCATTTTGTG
GTTTGCATGAGGCCGAGAAGCTCAAATGTAGGTTATGGCAATGTAATTAGATTCGGAATC
GTCTAGTTATGGCAGTGAAATTACATTGGGAAATTGGTAAGACCTATGTAAGTCAAAGAA
ATTCCATGGCAGTGTCTGTTTTACAAGGATTCTCTCTGGTAACTCGGTTAACTTTCTATC
GTGTGAGTACC
■■Homology search results ■■ -
sp_hit_id Q6BZD9
Definition sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryomyces hansenii
Align length 44
Score (bit) 30.0
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914833|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_D06.
(431 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1 OS=Debaryom... 30 4.2

>sp|Q6BZD9|CHL1_DEBHA ATP-dependent RNA helicase CHL1
OS=Debaryomyces hansenii GN=CHL1 PE=3 SV=2
Length = 820

Score = 30.0 bits (66), Expect = 4.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2

Query: 287 LDSESSSYGSEITLGNW*DLCKSKKFHGSVCFTRILSGNSVNFL 418
LD SS Y IT D+ KS KF+ + R+ SGN +N +
Sbjct: 358 LDVISSIYSVSITSNELSDITKSLKFYLNKFIKRLNSGNRINIM 401


tr_hit_id A4TYA3
Definition tr|A4TYA3|A4TYA3_9PROT Hydantoinase/oxoprolinase OS=Magnetospirillum gryphiswaldense
Align length 62
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914833|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_D06.
(431 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4TYA3|A4TYA3_9PROT Hydantoinase/oxoprolinase OS=Magnetospiri... 35 2.5
tr|O00901|O00901_LEIMA Putative uncharacterized protein OS=Leish... 33 7.1
tr|A4HRG2|A4HRG2_LEIIN Putative uncharacterized protein OS=Leish... 33 7.1

>tr|A4TYA3|A4TYA3_9PROT Hydantoinase/oxoprolinase
OS=Magnetospirillum gryphiswaldense GN=MGR_0519 PE=4
SV=1
Length = 1209

Score = 34.7 bits (78), Expect = 2.5
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3

Query: 9 PHLYWSGGTGSKDVQRVVQSGSDVFARFAALNVCSKENIARLLSLYQICNRLNTAKRICA 188
PH++ GG DVQ V D FAR AA C E +A + N N K++
Sbjct: 375 PHVFGPGGNQPLDVQAV----RDGFARLAARMGCGPEQVAEGFLAIAVANMANAVKQVSV 430

Query: 189 TK 194
+
Sbjct: 431 AR 432


>tr|O00901|O00901_LEIMA Putative uncharacterized protein
OS=Leishmania major strain Friedlin GN=LMJ_0040 PE=4
SV=1
Length = 822

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +3

Query: 294 RNRLVMAVKLHWEIGKTYVSQRNSMAVSVLQGFSLVTRL 410
R R+V AV+ E+ KT++S+R+ + S+ QG +L+TRL
Sbjct: 526 RQRMVTAVE---EMEKTFISERDRLQQSITQGEALLTRL 561


>tr|A4HRG2|A4HRG2_LEIIN Putative uncharacterized protein
OS=Leishmania infantum GN=LinJ01.0400 PE=4 SV=1
Length = 619

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +3

Query: 294 RNRLVMAVKLHWEIGKTYVSQRNSMAVSVLQGFSLVTRL 410
R R+V AV+ E+ KT++S+R+ + S+ QG +L+TRL
Sbjct: 323 RQRIVTAVE---EMEKTFISERDRLQQSIAQGKALLTRL 358