Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914837|Adiantum capillus-veneris mRNA, clone: YMU001_000063_D10. (308 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1... 37 0.031 sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1... 37 0.040 sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizos... 36 0.068 sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1... 36 0.068 sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1... 36 0.068 sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1... 35 0.089 sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1... 35 0.089 sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1... 35 0.089 sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1... 35 0.12 sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1... 35 0.12 sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit OS=Saccharom... 35 0.15 sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1... 34 0.20 sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1... 34 0.20 sp|P11414|RPB1_CRIGR DNA-directed RNA polymerase II subunit RPB1... 34 0.20 sp|Q8SW86|Y2F4_ENCCU UPF0329 protein ECU02_1540 OS=Encephalitozo... 33 0.34 sp|Q8R9D0|MUTS2_THETN MutS2 protein OS=Thermoanaerobacter tengco... 33 0.34 sp|Q8SUH9|Y8K7_ENCCU UPF0329 protein ECU08_2070 OS=Encephalitozo... 33 0.58 sp|P02547|NFL_PIG Neurofilament light polypeptide OS=Sus scrofa ... 33 0.58 sp|P34735|YLU2_PICAN Uncharacterized protein in LEU2 3'region (F... 32 0.99 sp|Q15RL2|RNFD_PSEA6 Electron transport complex protein rnfD OS=... 32 0.99 sp|A1C9L6|NTE1_ASPCL Lysophospholipase nte1 OS=Aspergillus clava... 32 0.99 sp|Q9HDY9|MAM3_SCHPO M cell-type agglutination protein mam3 OS=S... 32 0.99 sp|Q63FR0|ATKB_BACCZ Potassium-transporting ATPase B chain OS=Ba... 31 1.7 sp|Q5B1T9|ATG2_EMENI Autophagy-related protein 2 OS=Emericella n... 31 1.7 sp|P38739|WSC4_YEAST Cell wall integrity and stress response com... 31 2.2 sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom... 31 2.2 sp|O84312|VATE_CHLTR V-type ATP synthase subunit E OS=Chlamydia ... 31 2.2 sp|Q3KM52|VATE_CHLTA V-type ATP synthase subunit E OS=Chlamydia ... 31 2.2 sp|Q8CQU8|RL25_STAES 50S ribosomal protein L25 OS=Staphylococcus... 31 2.2 sp|Q8K9Q9|LEPA_BUCAP GTP-binding protein lepA OS=Buchnera aphidi... 31 2.2
>sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=2 Length = 1852
Score = 37.0 bits (84), Expect = 0.031 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S +S S S + SSP ++ T T Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPT 1681
Query: 36 FSFTS 22 +S TS Sbjct: 1682 YSPTS 1686
Score = 35.8 bits (81), Expect = 0.068 Identities = 25/65 (38%), Positives = 36/65 (55%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S +S S S + +SP ++ T T Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPT 1688
Query: 36 FSFTS 22 +S TS Sbjct: 1689 YSPTS 1693
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S +S S + +SP ++ T T Sbjct: 1636 TSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPT 1695
Query: 36 FSFTS 22 +S TS Sbjct: 1696 YSPTS 1700
Score = 33.5 bits (75), Expect = 0.34 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 3/68 (4%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKI---CSTIFGISSPFWAMT 46 TS + SPTSP++S +S S S S P ++PS R S +S S + +SP ++ T Sbjct: 1643 TSPSYSPTSPSYSPSSPSYS---PSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1699
Query: 45 LKTFSFTS 22 T+S TS Sbjct: 1700 SPTYSPTS 1707
Score = 33.1 bits (74), Expect = 0.44 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ + Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPR 1674
Query: 36 FSFTS 22 +S TS Sbjct: 1675 YSPTS 1679
Score = 30.8 bits (68), Expect = 2.2 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSP++S S S S S+ +PS S S S S + SSP ++ + ++S +S Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672
Score = 28.9 bits (63), Expect = 8.4 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3
Query: 216 TSCADSPTSPAFSLAS--CSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTL 43 TS SPTSP++S S S + S+ +PS S S S S + +SP ++ T Sbjct: 1585 TSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1644
Query: 42 KTFSFTS 22 ++S TS Sbjct: 1645 PSYSPTS 1651
>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2 Length = 1853
Score = 36.6 bits (83), Expect = 0.040 Identities = 26/65 (40%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ T T Sbjct: 1626 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPT 1685
Query: 36 FSFTS 22 +S TS Sbjct: 1686 YSPTS 1690
Score = 35.4 bits (80), Expect = 0.089 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T T Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPT 1692
Query: 36 FSFTS 22 +S TS Sbjct: 1693 YSPTS 1697
Score = 34.7 bits (78), Expect = 0.15 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S +S S + +SP ++ T T Sbjct: 1640 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPT 1699
Query: 36 FSFTS 22 +S TS Sbjct: 1700 YSPTS 1704
Score = 33.1 bits (74), Expect = 0.44 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +P S S + S + +SP ++ T T Sbjct: 1647 TSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPT 1706
Query: 36 FSFTS 22 +S TS Sbjct: 1707 YSPTS 1711
Score = 31.2 bits (69), Expect = 1.7 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S +S Sbjct: 1617 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1676
Score = 30.8 bits (68), Expect = 2.2 Identities = 21/60 (35%), Positives = 31/60 (51%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SP SP++S S S S S+ +PS S S S S + +SP ++ T ++S TS Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Score = 30.8 bits (68), Expect = 2.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS SPTSP +S S + S S+ ++PS + S SS S +SP ++ T Sbjct: 1689 TSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSP----TSPSYSPTSPQ 1744
Query: 36 FSFTS 22 +S TS Sbjct: 1745 YSPTS 1749
>sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1 Length = 1236
Score = 35.8 bits (81), Expect = 0.068 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3
Query: 255 VPPTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIF 76 +P T + + S+ +S SP+S + S++S STSS +S SPS S+S STI Sbjct: 569 IPSTFSSVS-SILSSSTSSPSSTSLSISSSSTSSTFSSAS--TSSPSSISSSISSSSTIL 625
Query: 75 GISSPFW-AMTLKTFSFTSGIRSLM 4 +P ++ + + S SG S++ Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSIL 650
>sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1 (Fragments) OS=Pichia guilliermondii GN=RPB1 PE=3 SV=2 Length = 1579
Score = 35.8 bits (81), Expect = 0.068 Identities = 24/65 (36%), Positives = 36/65 (55%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S ++ +SP ++ T + Sbjct: 1458 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPS 1517
Query: 36 FSFTS 22 +S TS Sbjct: 1518 YSPTS 1522
Score = 35.0 bits (79), Expect = 0.12 Identities = 25/69 (36%), Positives = 37/69 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1437 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1496
Query: 36 FSFTSGIRS 10 +S TS + S Sbjct: 1497 YSPTSPLYS 1505
Score = 35.0 bits (79), Expect = 0.12 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1451 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPS 1510
Query: 36 FSFTS 22 +S TS Sbjct: 1511 YSPTS 1515
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1388 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1447
Query: 36 FSFTS 22 +S TS Sbjct: 1448 YSPTS 1452
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1395 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1454
Query: 36 FSFTS 22 +S TS Sbjct: 1455 YSPTS 1459
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1402 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1461
Query: 36 FSFTS 22 +S TS Sbjct: 1462 YSPTS 1466
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1409 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1468
Query: 36 FSFTS 22 +S TS Sbjct: 1469 YSPTS 1473
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1416 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1475
Query: 36 FSFTS 22 +S TS Sbjct: 1476 YSPTS 1480
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1423 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1482
Query: 36 FSFTS 22 +S TS Sbjct: 1483 YSPTS 1487
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1430 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1489
Query: 36 FSFTS 22 +S TS Sbjct: 1490 YSPTS 1494
Score = 33.9 bits (76), Expect = 0.26 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1381 TSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1440
Query: 36 FSFTS 22 +S TS Sbjct: 1441 YSPTS 1445
Score = 33.5 bits (75), Expect = 0.34 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1444 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPL 1503
Query: 36 FSFTS 22 +S TS Sbjct: 1504 YSPTS 1508
Score = 32.0 bits (71), Expect = 0.99 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S + +SP ++ T + Sbjct: 1465 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPS 1524
Query: 36 FSFTS 22 +S TS Sbjct: 1525 YSPTS 1529
Score = 32.0 bits (71), Expect = 0.99 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +P S S S S + +SP ++ T + Sbjct: 1472 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1531
Query: 36 FSFTS 22 +S TS Sbjct: 1532 YSPTS 1536
Score = 31.2 bits (69), Expect = 1.7 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S + +PS S S S S + +SP ++ T Sbjct: 1479 TSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ 1538
Query: 36 FSFTS 22 +S TS Sbjct: 1539 YSPTS 1543
Score = 31.2 bits (69), Expect = 1.7 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S+ +PS S S S S + +SP ++ T Sbjct: 1486 TSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPA 1545
Query: 36 FSFTS 22 +S TS Sbjct: 1546 YSPTS 1550
Score = 30.4 bits (67), Expect = 2.9 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP +S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1493 TSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQ 1552
Query: 36 FS 31 +S Sbjct: 1553 YS 1554
>sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1 OS=Dictyostelium discoideum GN=polr2a PE=2 SV=2 Length = 1727
Score = 35.8 bits (81), Expect = 0.068 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSP++S S S S S+ +PS S S S S + +SPF++ T ++S TS Sbjct: 1554 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTS 1613
Score = 35.0 bits (79), Expect = 0.12 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1556 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPS 1615
Query: 36 FSFTS 22 +S TS Sbjct: 1616 YSPTS 1620
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1605 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1664
Query: 36 FSFTS 22 +S TS Sbjct: 1665 YSPTS 1669
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1612 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1671
Query: 36 FSFTS 22 +S TS Sbjct: 1672 YSPTS 1676
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1619 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1678
Query: 36 FSFTS 22 +S TS Sbjct: 1679 YSPTS 1683
Score = 33.9 bits (76), Expect = 0.26 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASF----PFFAP-SPSRASTSSKICST--IFGISSPF 58 TS + SPTSP++S S S S S+ PF++P SPS + TS T + +SP Sbjct: 1570 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1629
Query: 57 WAMTLKTFSFTS 22 ++ T ++S TS Sbjct: 1630 YSPTSPSYSPTS 1641
Score = 33.9 bits (76), Expect = 0.26 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S +S S S + SSP ++ + T Sbjct: 1654 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPT 1713
Query: 36 FS 31 F+ Sbjct: 1714 FT 1715
Score = 33.1 bits (74), Expect = 0.44 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP +S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1591 TSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1650
Query: 36 FSFTS 22 +S TS Sbjct: 1651 YSPTS 1655
Score = 33.1 bits (74), Expect = 0.44 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1598 TSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1657
Query: 36 FSFTS 22 +S TS Sbjct: 1658 YSPTS 1662
Score = 32.7 bits (73), Expect = 0.58 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1626 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1685
Query: 36 FSFTS 22 +S +S Sbjct: 1686 YSPSS 1690
Score = 32.3 bits (72), Expect = 0.76 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ + + Sbjct: 1640 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS 1699
Query: 36 FSFTS 22 +S +S Sbjct: 1700 YSPSS 1704
Score = 32.3 bits (72), Expect = 0.76 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ + + Sbjct: 1647 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPS 1706
Query: 36 FSFTS 22 +S +S Sbjct: 1707 YSPSS 1711
Score = 32.0 bits (71), Expect = 0.99 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S + +SP ++ T + Sbjct: 1563 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPS 1622
Query: 36 FSFTS 22 +S TS Sbjct: 1623 YSPTS 1627
Score = 32.0 bits (71), Expect = 0.99 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1584 TSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1643
Query: 36 FSFTS 22 +S TS Sbjct: 1644 YSPTS 1648
Score = 31.2 bits (69), Expect = 1.7 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ + + Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS 1692
Query: 36 FSFTS 22 +S +S Sbjct: 1693 YSPSS 1697
>sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1 OS=Saccharomyces cerevisiae GN=RPB1 PE=1 SV=2 Length = 1733
Score = 35.4 bits (80), Expect = 0.089 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1552 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1611
Query: 36 FSFTS 22 +S TS Sbjct: 1612 YSPTS 1616
Score = 35.0 bits (79), Expect = 0.12 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS SPTSPA+S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1545 TSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1604
Query: 36 FSFTS 22 +S TS Sbjct: 1605 YSPTS 1609
Score = 34.7 bits (78), Expect = 0.15 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS 1674
Query: 36 FSFTS 22 +S TS Sbjct: 1675 YSPTS 1679
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1559 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1618
Query: 36 FSFTS 22 +S TS Sbjct: 1619 YSPTS 1623
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1566 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1625
Query: 36 FSFTS 22 +S TS Sbjct: 1626 YSPTS 1630
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1573 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1632
Query: 36 FSFTS 22 +S TS Sbjct: 1633 YSPTS 1637
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 36 FSFTS 22 +S TS Sbjct: 1640 YSPTS 1644
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1587 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1646
Query: 36 FSFTS 22 +S TS Sbjct: 1647 YSPTS 1651
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1594 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1653
Query: 36 FSFTS 22 +S TS Sbjct: 1654 YSPTS 1658
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1608 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS 1667
Query: 36 FSFTS 22 +S TS Sbjct: 1668 YSPTS 1672
Score = 33.9 bits (76), Expect = 0.26 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1601 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1660
Query: 36 FSFTS 22 +S TS Sbjct: 1661 YSPTS 1665
Score = 33.1 bits (74), Expect = 0.44 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T + Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1681
Query: 36 FSFTS 22 +S TS Sbjct: 1682 YSPTS 1686
Score = 33.1 bits (74), Expect = 0.44 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +P+ S S S S + +SP ++ T + Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1688
Query: 36 FSFTS 22 +S TS Sbjct: 1689 YSPTS 1693
Score = 32.7 bits (73), Expect = 0.58 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S ++ +PS S S S S + +SP ++ T Sbjct: 1636 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN 1695
Query: 36 FSFTS 22 +S TS Sbjct: 1696 YSPTS 1700
Score = 32.7 bits (73), Expect = 0.58 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S + S S+ +PS S S S S + +SP ++ T + Sbjct: 1643 TSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS 1702
Query: 36 FSFTS 22 +S TS Sbjct: 1703 YSPTS 1707
Score = 32.0 bits (71), Expect = 0.99 Identities = 23/62 (37%), Positives = 32/62 (51%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSPA+S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1650 TSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709
Query: 36 FS 31 +S Sbjct: 1710 YS 1711
Score = 31.6 bits (70), Expect = 1.3 Identities = 26/76 (34%), Positives = 37/76 (48%) Frame = -3
Query: 249 PTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGI 70 PT G+S S SPTSP +S S + S S+ +PS S S S S + Sbjct: 1530 PTSPGFGVS---SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1586
Query: 69 SSPFWAMTLKTFSFTS 22 +SP ++ T ++S TS Sbjct: 1587 TSPSYSPTSPSYSPTS 1602
Score = 29.6 bits (65), Expect = 4.9 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = -3
Query: 204 DSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFT 25 ++PTSP F ++S S ++ +P+ S S S S + +SP ++ T ++S T Sbjct: 1528 EAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587
Query: 24 S 22 S Sbjct: 1588 S 1588
>sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1 OS=Ashbya gossypii GN=RPB1 PE=3 SV=1 Length = 1745
Score = 35.4 bits (80), Expect = 0.089 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1548 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1607
Query: 36 FSFTS 22 +S TS Sbjct: 1608 YSPTS 1612
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1555 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1614
Query: 36 FSFTS 22 +S TS Sbjct: 1615 YSPTS 1619
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1562 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1621
Query: 36 FSFTS 22 +S TS Sbjct: 1622 YSPTS 1626
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1569 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1628
Query: 36 FSFTS 22 +S TS Sbjct: 1629 YSPTS 1633
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1576 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635
Query: 36 FSFTS 22 +S TS Sbjct: 1636 YSPTS 1640
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1583 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1642
Query: 36 FSFTS 22 +S TS Sbjct: 1643 YSPTS 1647
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1590 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1649
Query: 36 FSFTS 22 +S TS Sbjct: 1650 YSPTS 1654
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1597 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1656
Query: 36 FSFTS 22 +S TS Sbjct: 1657 YSPTS 1661
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663
Query: 36 FSFTS 22 +S TS Sbjct: 1664 YSPTS 1668
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1611 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1670
Query: 36 FSFTS 22 +S TS Sbjct: 1671 YSPTS 1675
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 36 FSFTS 22 +S TS Sbjct: 1678 YSPTS 1682
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1625 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684
Query: 36 FSFTS 22 +S TS Sbjct: 1685 YSPTS 1689
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1632 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1691
Query: 36 FSFTS 22 +S TS Sbjct: 1692 YSPTS 1696
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698
Query: 36 FSFTS 22 +S TS Sbjct: 1699 YSPTS 1703
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1646 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1705
Query: 36 FSFTS 22 +S TS Sbjct: 1706 YSPTS 1710
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 36 FSFTS 22 +S TS Sbjct: 1713 YSPTS 1717
Score = 33.9 bits (76), Expect = 0.26 Identities = 23/60 (38%), Positives = 32/60 (53%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSPA+S S S S S+ +PS S S S S + +SP ++ T ++S TS Sbjct: 1546 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1605
Score = 31.6 bits (70), Expect = 1.3 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ 1719
Query: 36 FS 31 +S Sbjct: 1720 YS 1721
Score = 29.6 bits (65), Expect = 4.9 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ + Sbjct: 1667 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPRSPS 1726
Query: 36 FS 31 +S Sbjct: 1727 YS 1728
>sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana GN=RPB205 PE=1 SV=2 Length = 1840
Score = 35.4 bits (80), Expect = 0.089 Identities = 26/65 (40%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A SPTSPA+S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1646 TSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPG 1705
Query: 36 FSFTS 22 +S TS Sbjct: 1706 YSPTS 1710
Score = 35.4 bits (80), Expect = 0.089 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1653 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPS 1712
Query: 36 FSFTS 22 +S TS Sbjct: 1713 YSPTS 1717
Score = 35.0 bits (79), Expect = 0.12 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1590 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA 1649
Query: 36 FSFTS 22 +S TS Sbjct: 1650 YSPTS 1654
Score = 35.0 bits (79), Expect = 0.12 Identities = 25/65 (38%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A SPTSPA+S S + S S+ +PS S S S S + +SP ++ T Sbjct: 1639 TSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1698
Query: 36 FSFTS 22 +S TS Sbjct: 1699 YSPTS 1703
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T Sbjct: 1597 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA 1656
Query: 36 FSFTS 22 +S TS Sbjct: 1657 YSPTS 1661
Score = 33.5 bits (75), Expect = 0.34 Identities = 23/60 (38%), Positives = 31/60 (51%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSPA+S S S S S+ +PS S S S S + +SP ++ T +S TS Sbjct: 1588 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1647
Score = 33.5 bits (75), Expect = 0.34 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T + Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPS 1663
Query: 36 FSFTS 22 +S TS Sbjct: 1664 YSPTS 1668
Score = 33.1 bits (74), Expect = 0.44 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSPA+S S + S ++ +PS S S S S + +SP ++ T + Sbjct: 1632 TSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1691
Query: 36 FSFTS 22 +S TS Sbjct: 1692 YSPTS 1696
Score = 32.3 bits (72), Expect = 0.76 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +P+ S S + S + +SP ++ T + Sbjct: 1611 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPS 1670
Query: 36 FSFTS 22 +S TS Sbjct: 1671 YSPTS 1675
Score = 31.2 bits (69), Expect = 1.7 Identities = 22/65 (33%), Positives = 33/65 (50%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS SPTSP +S +S S ++ +PS S S S S + +SP ++ T + Sbjct: 1569 TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1628
Query: 36 FSFTS 22 +S TS Sbjct: 1629 YSPTS 1633
Score = 30.8 bits (68), Expect = 2.2 Identities = 22/65 (33%), Positives = 33/65 (50%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS SP+SP +S S + S S+ +PS S S S S + +SP ++ T + Sbjct: 1576 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635
Query: 36 FSFTS 22 +S TS Sbjct: 1636 YSPTS 1640
Score = 30.8 bits (68), Expect = 2.2 Identities = 21/65 (32%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S ++ +P+ S S + S + +SP ++ T + Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1677
Query: 36 FSFTS 22 +S TS Sbjct: 1678 YSPTS 1682
Score = 30.8 bits (68), Expect = 2.2 Identities = 21/65 (32%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S + S ++ +P+ S S S S + +SP ++ T + Sbjct: 1625 TSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684
Query: 36 FSFTS 22 +S TS Sbjct: 1685 YSPTS 1689
Score = 30.8 bits (68), Expect = 2.2 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T + Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPS 1719
Query: 36 FSFTS 22 + TS Sbjct: 1720 YGPTS 1724
>sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1 OS=Schizosaccharomyces pombe GN=rpb1 PE=1 SV=1 Length = 1752
Score = 35.0 bits (79), Expect = 0.12 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1640
Query: 36 FSFTS 22 +S TS Sbjct: 1641 YSPTS 1645
Score = 35.0 bits (79), Expect = 0.12 Identities = 24/65 (36%), Positives = 36/65 (55%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S+ S+ +PS S S S S + +SP ++ T + Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1647
Query: 36 FSFTS 22 +S TS Sbjct: 1648 YSPTS 1652
Score = 35.0 bits (79), Expect = 0.12 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1595 TSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1654
Query: 36 FSFTS 22 +S TS Sbjct: 1655 YSPTS 1659
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1609 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1668
Query: 36 FSFTS 22 +S TS Sbjct: 1669 YSPTS 1673
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1616 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1675
Query: 36 FSFTS 22 +S TS Sbjct: 1676 YSPTS 1680
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1623 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1682
Query: 36 FSFTS 22 +S TS Sbjct: 1683 YSPTS 1687
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1630 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1689
Query: 36 FSFTS 22 +S TS Sbjct: 1690 YSPTS 1694
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1637 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1696
Query: 36 FSFTS 22 +S TS Sbjct: 1697 YSPTS 1701
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1644 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1703
Query: 36 FSFTS 22 +S TS Sbjct: 1704 YSPTS 1708
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1651 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1710
Query: 36 FSFTS 22 +S TS Sbjct: 1711 YSPTS 1715
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1658 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1717
Query: 36 FSFTS 22 +S TS Sbjct: 1718 YSPTS 1722
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1724
Query: 36 FSFTS 22 +S TS Sbjct: 1725 YSPTS 1729
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1672 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1731
Query: 36 FSFTS 22 +S TS Sbjct: 1732 YSPTS 1736
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1679 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1738
Query: 36 FSFTS 22 +S TS Sbjct: 1739 YSPTS 1743
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1686 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1745
Query: 36 FSFTS 22 +S TS Sbjct: 1746 YSPTS 1750
Score = 33.1 bits (74), Expect = 0.44 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S TS Sbjct: 1579 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1638
Score = 32.7 bits (73), Expect = 0.58 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS A P+SP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPS 1626
Query: 36 FSFTS 22 +S TS Sbjct: 1627 YSPTS 1631
Score = 31.2 bits (69), Expect = 1.7 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + S TSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1602 TSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1661
Query: 36 FSFTS 22 +S TS Sbjct: 1662 YSPTS 1666
Score = 30.0 bits (66), Expect = 3.8 Identities = 24/76 (31%), Positives = 34/76 (44%) Frame = -3
Query: 249 PTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGI 70 P L S S TSPA+ +S S S S+ +PS S S S S + Sbjct: 1549 PGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSA 1608
Query: 69 SSPFWAMTLKTFSFTS 22 +SP ++ T ++S TS Sbjct: 1609 TSPSYSPTSPSYSPTS 1624
Score = 28.9 bits (63), Expect = 8.4 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSP 61 TS + SPTSP++S S S S S+ +PS S S S S + +SP Sbjct: 1700 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
>sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1 OS=Encephalitozoon cuniculi GN=RPB1 PE=3 SV=1 Length = 1599
Score = 35.0 bits (79), Expect = 0.12 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP +++++ + Sbjct: 1518 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMSS 1577
Query: 36 FS 31 FS Sbjct: 1578 FS 1579
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1469 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1528
Query: 36 FSFTS 22 +S TS Sbjct: 1529 YSPTS 1533
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1476 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1535
Query: 36 FSFTS 22 +S TS Sbjct: 1536 YSPTS 1540
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1483 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1542
Query: 36 FSFTS 22 +S TS Sbjct: 1543 YSPTS 1547
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1490 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1549
Query: 36 FSFTS 22 +S TS Sbjct: 1550 YSPTS 1554
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1497 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1556
Query: 36 FSFTS 22 +S TS Sbjct: 1557 YSPTS 1561
Score = 34.3 bits (77), Expect = 0.20 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1504 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1563
Query: 36 FSFTS 22 +S TS Sbjct: 1564 YSPTS 1568
Score = 32.7 bits (73), Expect = 0.58 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = -3
Query: 201 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 22 SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S TS Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1526
Score = 32.3 bits (72), Expect = 0.76 Identities = 22/62 (35%), Positives = 33/62 (53%) Frame = -3
Query: 216 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 37 TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T + Sbjct: 1511 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1570
Query: 36 FS 31 +S Sbjct: 1571 YS 1572
|