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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914846
Clone id YMU001_000063_E07
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGTAAAACTACACTCCGAAACAAACCCACACGTGATGGTGAAGGTCTTTACATGAAGGCT
TACACCCTTCACGGAATGGAGGCTCCGACTCTCAGCGAGTGCCTATGAGAACAAGGGCCT
TTGTTTCCCGACAGCAAATTACCCCAACGACCCCTTTGAAAAAAGCCCAAATTGCCACCG
TATTCCACCTCACTGCAATTCGAGCAGTGAGTTTCTAAAGTTGGTTTTATCCATGTTTGG
CCAACCGTAATTCCCACTTTACGACCTCATCTGCGCGCGCAGCACCTAGCTATGTGCGGC
ATGGGACACCTTATCGAAACACAAGGGAGAATGACATCTACAATAACCTTGGAGGCTTCA
ATAACCCATGCCTCTTGTTATGCCCTGTACAGTATCACTATTTATGTATGCTTATAAACC
TCCTCTGTTGCTACCATGCTTATAAAATACATCATCCTGTCTGTCCGTGTACATGCCAGG
AGGAACAGTCTTTAGCAAAAATTATATTGTTCCAAAACATACATAGTTTCCATT
■■Homology search results ■■ -
sp_hit_id O94342
Definition sp|O94342|YHM9_SCHPO Probable metabolite transport protein C1271.09 OS=Schizosaccharomyces pombe
Align length 33
Score (bit) 30.4
E-value 5.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914846|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_E07.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94342|YHM9_SCHPO Probable metabolite transport protein C1271...    30   5.6  
sp|P0C1J8|PIN1_RHIOR Peptidyl-prolyl cis-trans isomerase pin1 OS...    30   5.6  
sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5 OS=Ara...    30   5.6  
sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens...    30   5.6  
sp|P0AAY5|YBJH_SHIFL Uncharacterized protein ybjH OS=Shigella fl...    30   5.7  
sp|P0AAY4|YBJH_ECOLI Uncharacterized protein ybjH OS=Escherichia...    30   5.7  
sp|P16435|NCPR_HUMAN NADPH--cytochrome P450 reductase OS=Homo sa...    30   7.3  

>sp|O94342|YHM9_SCHPO Probable metabolite transport protein C1271.09
           OS=Schizosaccharomyces pombe GN=SPBC1271.09 PE=2 SV=1
          Length = 543

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 326 GE*HLQ*PWRLQ*PMPLVMPCTVSLFMYAYKPP 424
           GE HL+  WRL   + LV+PC +  F  A K P
Sbjct: 244 GEHHLRIVWRLSIGLGLVIPCVLLPFRIAMKDP 276


>sp|P0C1J8|PIN1_RHIOR Peptidyl-prolyl cis-trans isomerase pin1
           OS=Rhizopus oryzae GN=pin1 PE=3 SV=1
          Length = 150

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -2

Query: 218 LETHCSNCSEVEYGGNLGFFQRGR 147
           L T+ S+C+  + GG+LG+F+RG+
Sbjct: 93  LATNYSDCTSAKRGGDLGYFERGQ 116


>sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5
           OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1
          Length = 956

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 69  SRNGGSDSQRVPMRTRAFVSRQQITPTTPLKK 164
           S N  SDS     RT +FV  ++ TPT P+K+
Sbjct: 846 SFNSCSDSSPAETRTNSFVPEEETTPTPPVKE 877


>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens
           GN=HELLS PE=1 SV=1
          Length = 838

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 24/107 (22%)
 Frame = +3

Query: 225 FYPCLANRN-SHFTTSSARAAPSYVRHGTPYRNTRENDIYNNLGGFNNPCLLLC------ 383
           FY  + NR  ++   SS +        G P R TR++  Y+ +  F N    L       
Sbjct: 479 FYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPE 538

Query: 384 ------------PVQYHYLCMLINLL-----CCYHAYKIHHPVCPCT 473
                       PV+      L N++     CC H Y I +P+ P T
Sbjct: 539 VDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPIDPVT 585


>sp|P0AAY5|YBJH_SHIFL Uncharacterized protein ybjH OS=Shigella
           flexneri GN=ybjH PE=4 SV=1
          Length = 94

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 229 IHVWPTVIPTLRPHLRAQHLAMCGMGHLIETQ 324
           ++V P   P  RPH   +HLA  G G +IE Q
Sbjct: 57  VYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQ 88


>sp|P0AAY4|YBJH_ECOLI Uncharacterized protein ybjH OS=Escherichia
           coli (strain K12) GN=ybjH PE=4 SV=1
          Length = 94

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 229 IHVWPTVIPTLRPHLRAQHLAMCGMGHLIETQ 324
           ++V P   P  RPH   +HLA  G G +IE Q
Sbjct: 57  VYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQ 88


>sp|P16435|NCPR_HUMAN NADPH--cytochrome P450 reductase OS=Homo
           sapiens GN=POR PE=1 SV=2
          Length = 677

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 20/74 (27%), Positives = 33/74 (44%)
 Frame = -2

Query: 371 AWVIEASKVIVDVILPCVSIRCPMPHIARCCARR*GRKVGITVGQTWIKPTLETHCSNCS 192
           +WV+EA + I+ ++  C S+R P+ H+     R   R   I    + + P     C+   
Sbjct: 418 SWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSI-ASSSKVHPNSVHICA--V 474

Query: 191 EVEYGGNLGFFQRG 150
            VEY    G   +G
Sbjct: 475 VVEYETKAGRINKG 488
tr_hit_id Q8IM68
Definition tr|Q8IM68|Q8IM68_PLAF7 Putative uncharacterized protein OS=Plasmodium falciparum (isolate 3D7)
Align length 82
Score (bit) 30.8
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914846|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_E07.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8IM68|Q8IM68_PLAF7 Putative uncharacterized protein OS=Plasm...    31   2.5  
tr|A9U238|A9U238_PHYPA Predicted protein (Fragment) OS=Physcomit...    34   4.1  
tr|A4UC44|A4UC44_MAGGR Putative uncharacterized protein OS=Magna...    34   5.5  
tr|O97281|O97281_PLAF7 Putative uncharacterized protein MAL3P7.8...    28   9.0  
tr|A8TA68|A8TA68_9VIBR Putative OtnG protein OS=Vibrio campbelli...    33   9.3  
tr|B2AXI7|B2AXI7_PODAN Predicted CDS Pa_7_10700 OS=Podospora ans...    33   9.3  

>tr|Q8IM68|Q8IM68_PLAF7 Putative uncharacterized protein
           OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0023 PE=4
           SV=1
          Length = 879

 Score = 30.8 bits (68), Expect(2) = 2.5
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
 Frame = +3

Query: 255 HFTTSSARAAPSYV-RHGTPYRNTRE-NDIYNNLGGFNNPCLLLCPVQYHYLCML----- 413
           +F ++S RA  S+V  H   Y   R+ N+ Y N   + N C   C  QY   C       
Sbjct: 279 NFFSASQRAKDSFVCEHRNGYNKKRKKNNQYQNQCQYQNQCQYQCQCQYQNQCQYQCQCQ 338

Query: 414 --------INLLCCYHAYKIHH 455
                    N + C H Y  +H
Sbjct: 339 YQNIYKCDENNIICTHNYDNYH 360



 Score = 22.7 bits (47), Expect(2) = 2.5
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = +2

Query: 80  RLRLSASAYENKGLCFPTANYPNDPFEKSPNCHRIPPHCNSSS 208
           +++L    YEN  L F   NY N     + N      H N  +
Sbjct: 232 KIKLLIILYENASLVFTNENYKNKNNNNNNNKIYYNQHINDQT 274


>tr|A9U238|A9U238_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_100584 PE=4 SV=1
          Length = 159

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +3

Query: 243 NRNSHFTTSSARAAPSYVRHGTPYRNTRENDIYNNLGGFNNPCLLLCPVQYHYLCMLINL 422
           N +  FTTSSA+ AP ++ +  P   TR N   +N   F+    L  P  Y +  M  N+
Sbjct: 41  NLSPTFTTSSAKQAPIFLMNTNPAETTRRN--AHNSNDFSYSAALHIPPPYKF-TMYPNI 97

Query: 423 LCCYHAYKIHHPVC 464
                AY+   P C
Sbjct: 98  ATPQPAYRNPDPQC 111


>tr|A4UC44|A4UC44_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_11100 PE=4 SV=1
          Length = 655

 Score = 33.9 bits (76), Expect = 5.5
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -1

Query: 492 KTVPPGMYTDRQDDVFYKHGSNRGGL*AYINSDTVQGITR 373
           K++P G++T  QD +++ H     GL A+IN+ T +  TR
Sbjct: 58  KSLPSGLHTVSQDLIYFIHEGEYAGLSAFINAKTEEEATR 97


>tr|O97281|O97281_PLAF7 Putative uncharacterized protein MAL3P7.8
           OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.8 PE=4
           SV=1
          Length = 578

 Score = 28.1 bits (61), Expect(2) = 9.0
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 16/76 (21%)
 Frame = +3

Query: 228 YPCLANRNSHF---------TTSSARAAPSYVRHGT-------PYRNTRENDIYNNLGGF 359
           YPC+ +   ++         + +    APS   +G+         +N  E  ++ NL   
Sbjct: 418 YPCINSCEKNYDDLCPNLWISINGNECAPSEYYNGSCKENYIFKKKNVEEKKMFENLCEV 477

Query: 360 NNPCLLLCPVQYHYLC 407
           + PCL  C   Y Y C
Sbjct: 478 SYPCLKKCKRNYSYSC 493



 Score = 23.5 bits (49), Expect(2) = 9.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 110 NKGLCFPTANY 142
           N G CFPT NY
Sbjct: 379 NDGYCFPTRNY 389


>tr|A8TA68|A8TA68_9VIBR Putative OtnG protein OS=Vibrio campbellii
           AND4 GN=AND4_17991 PE=4 SV=1
          Length = 732

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +1

Query: 211 VSKVGFIHVWPTVIPTLRPHLRAQHLAMCGMGHLIETQGRMTSTITLEASITHASCYALY 390
           +S +G   VW   +P   P L+A  +   G+G +    GRM        +IT +  Y  Y
Sbjct: 10  LSLIGPAMVWAQDMPFEAPQLQASQMDFGGVGLMQMPTGRMAPEGEFNFAITGSDEYLFY 69

Query: 391 SITIYV 408
           ++T+ V
Sbjct: 70  NVTLQV 75


>tr|B2AXI7|B2AXI7_PODAN Predicted CDS Pa_7_10700 OS=Podospora
           anserina PE=4 SV=1
          Length = 682

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -1

Query: 492 KTVPPGMYTDRQDDVFYKHGSNRGGL*AYINSDTVQGITR 373
           K++P G++T   D +++ H ++  GL A+IN+ T +  TR
Sbjct: 64  KSLPSGLHTVTDDLIYFVHDASHAGLSAFINTPTDEEETR 103