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NBDC - LSDB Archive
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BP914856
Clone id YMU001_000063_F05
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTGCAGTGAAGCCACCACTGGGAAGTTGTTTCATTATGTATGCAAAGTGGCTGGGAC
ACAAAAGCTCATAAGAGCAAGCTTGTTAGGCGCCAGTGGGAAATGGGAAGCAGGCATTCA
TGCCAACTAAATTGGCTTGCTTTAAGAAAGTTTAGACAGAGGGCTTCTGGACAAGGAAGC
CGGAGACCTGCACCTGCCTCTTAGCGTCAAAGCCCAGCACGCGGATGAAGGCTTCAGGAT
ACTCCTTGGCGCACTCTGCAATTTCACGCAGCACAGCAGCGGCATCTTGGCAGCCAAACA
TGGGCAGCTTCCACATCACCCAGTACCGCCCATCGTAGTAGCCGCTGCCGTGGAAGTGCT
CTCGGTACACGCTCCCGATTTTGTCGAACTCAATGCAAGGGGTCCAGCCTTTTCGGACCA
TGAAGTCCACCTGCTTCGCAATCTGCTCACTTGACAAAGGCGGCAAGTAGGACAGAGTCT
CGAACTTCTTGTTGTCATACGGCTTCCACACAAGCATGGCACTCACACGGGTGCCATTAG
AGATGGCGAGCG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 128
Score (bit) 181.0
E-value 3.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914856|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_F05.
         (552 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   181   3e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   180   5e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   180   5e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   177   3e-44
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   177   3e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   177   3e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   176   7e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   176   7e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   176   9e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   175   1e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   174   2e-43
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   174   3e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   174   3e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   173   6e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   173   6e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   173   6e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   173   6e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   171   2e-42
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   171   3e-42

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  181 bits (458), Expect = 3e-45
 Identities = 80/128 (62%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 365
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 364 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 185
           REH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169

Query: 184 SGFLVQKP 161
             F+V KP
Sbjct: 170 ISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  180 bits (456), Expect = 5e-45
 Identities = 78/127 (61%), Positives = 96/127 (75%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ  
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 181 GFLVQKP 161
            FL  KP
Sbjct: 169 SFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  180 bits (456), Expect = 5e-45
 Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 365
           SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 364 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 185
           REH    GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 184 SGFLVQKP 161
             F+  KP
Sbjct: 172 ISFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  177 bits (449), Expect = 3e-44
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 181 GFLVQKPS 158
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  177 bits (449), Expect = 3e-44
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 181 GFLVQKPS 158
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  177 bits (449), Expect = 3e-44
 Identities = 80/128 (62%), Positives = 94/128 (73%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 181 GFLVQKPS 158
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  176 bits (446), Expect = 7e-44
 Identities = 80/130 (61%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           +NG+RVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++++ GW PCIEFD  G+V R
Sbjct: 51  TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAKRQVQV 185
           E     GYYDGRYW MWKLPMFGC D+A+VLREI EC K Y  + +IR LGFD  RQVQ 
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQC 170

Query: 184 SGFLVQKPSV 155
           + F+V +P++
Sbjct: 171 ASFIVHQPTL 180


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  176 bits (446), Expect = 7e-44
 Identities = 79/128 (61%), Positives = 94/128 (73%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG +VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
           E+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 181 GFLVQKPS 158
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  176 bits (445), Expect = 9e-44
 Identities = 77/127 (60%), Positives = 96/127 (75%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG RV  M VW P+ N KFETLSYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
           ++    GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ  
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 181 GFLVQKP 161
            F+V KP
Sbjct: 164 SFIVHKP 170


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  176 bits (445), Expect = 9e-44
 Identities = 77/127 (60%), Positives = 97/127 (76%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 362
           SNG+RV  M VW PY NKKFETLSYLP L+ EQ+ K+V+++++  W PC+EF++ G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 361 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 182
            + +  GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  RQVQ  
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 181 GFLVQKP 161
            F+V KP
Sbjct: 180 SFIVHKP 186
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 131
Score (bit) 254.0
E-value 3.0e-66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914856|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_F05.
         (552 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   254   3e-66
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   183   6e-45
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   179   7e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   178   1e-43
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   177   3e-43
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   174   3e-42
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   174   3e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  254 bits (648), Expect = 3e-66
 Identities = 115/131 (87%), Positives = 127/131 (96%)
 Frame = -3

Query: 550 LAISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGS 371
           LAISNG+R+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGS
Sbjct: 43  LAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGS 102

Query: 370 VYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQV 191
           VYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQV
Sbjct: 103 VYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQV 162

Query: 190 QVSGFLVQKPS 158
           QV+GFLV+KPS
Sbjct: 163 QVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  183 bits (464), Expect = 6e-45
 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 365
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 364 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 185
           REH H  GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQC 169

Query: 184 SGFLVQKP 161
             F+V KP
Sbjct: 170 ISFIVSKP 177


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  182 bits (462), Expect = 1e-44
 Identities = 81/133 (60%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = -3

Query: 547 AISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 368
           A+ NG+RV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV
Sbjct: 52  AVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSV 111

Query: 367 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 197
            R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+
Sbjct: 112 SRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKK 171

Query: 196 QVQVSGFLVQKPS 158
           QVQ+ GFLV +P+
Sbjct: 172 QVQICGFLVSRPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  182 bits (462), Expect = 1e-44
 Identities = 82/133 (61%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = -3

Query: 547 AISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 368
           ++ NG+RV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 367 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 197
            R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+
Sbjct: 107 SRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKK 166

Query: 196 QVQVSGFLVQKPS 158
           QVQ+ GFLV +P+
Sbjct: 167 QVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  182 bits (462), Expect = 1e-44
 Identities = 82/133 (61%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = -3

Query: 547 AISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 368
           ++ NG+RV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV
Sbjct: 47  SVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSV 106

Query: 367 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 197
            R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+
Sbjct: 107 SRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKK 166

Query: 196 QVQVSGFLVQKPS 158
           QVQ+ GFLV +P+
Sbjct: 167 QVQICGFLVARPN 179


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  181 bits (460), Expect = 2e-44
 Identities = 77/128 (60%), Positives = 97/128 (75%)
 Frame = -3

Query: 544 ISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 365
           +SNG++   M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV 
Sbjct: 41  VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 364 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 185
           REH    GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q 
Sbjct: 101 REHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQC 160

Query: 184 SGFLVQKP 161
             F++QKP
Sbjct: 161 MAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  181 bits (459), Expect = 2e-44
 Identities = 80/133 (60%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = -3

Query: 547 AISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 368
           ++ NG+RV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV
Sbjct: 82  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSV 141

Query: 367 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 197
            R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+
Sbjct: 142 SRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKK 201

Query: 196 QVQVSGFLVQKPS 158
           QVQ+ GFLV +P+
Sbjct: 202 QVQICGFLVSRPN 214


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  180 bits (457), Expect = 4e-44
 Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -3

Query: 541 SNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 365
           +NG RV  MLVW P   KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VY
Sbjct: 42  NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVY 101

Query: 364 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 185
           RE+    GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KRQVQ 
Sbjct: 102 RENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQC 161

Query: 184 SGFLVQKP 161
             F+  KP
Sbjct: 162 ISFIAYKP 169


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  180 bits (456), Expect = 5e-44
 Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
 Frame = -3

Query: 547 AISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 368
           ++ NG+RV  M VW P    KFET SYLPPLS +QIA+QVD+M+++   PCIEFD +G+V
Sbjct: 52  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAV 111

Query: 367 YREHFHGSG---YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 197
            R +F GSG   YYDGRYW MWKLPMFGC D++ VLREI EC   YP  ++RVLGFD+K+
Sbjct: 112 SRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKK 171

Query: 196 QVQVSGFLVQKPS 158
           QVQ+ GFLV +P+
Sbjct: 172 QVQICGFLVARPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  179 bits (455), Expect = 7e-44
 Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = -3

Query: 547 AISNGTRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSV 368
           ++ NG+RV  M VW P    KFET SYLPPL+ ++IAKQVD+M+++   PCIEFD +GSV
Sbjct: 51  SVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSV 110

Query: 367 YREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKR 197
            R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+
Sbjct: 111 SRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKK 170

Query: 196 QVQVSGFLVQKPS 158
           QVQ+ GFLV +P+
Sbjct: 171 QVQICGFLVSRPN 183