BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914870|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_G07.
         (410 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein st...    30   5.0  
sp|Q3ATP4|RPOC_CHLCH DNA-directed RNA polymerase subunit beta' O...    30   5.0  
sp|Q8H1R4|NAP13_ARATH Non-intrinsic ABC protein 13, chloroplasti...    30   5.0  
sp|Q9LUL4|SRF7_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Ara...    29   8.5  

>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan
            OS=Drosophila melanogaster GN=stan PE=1 SV=3
          Length = 3574

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +3

Query: 54   TLLMSGIIILYQIFVLIGLCCLS 122
            +LL+SG+++L+ +F LIG C ++
Sbjct: 3031 SLLLSGVVLLHALFCLIGYCIIN 3053


>sp|Q3ATP4|RPOC_CHLCH DNA-directed RNA polymerase subunit beta'
           OS=Chlorobium chlorochromatii (strain CaD3) GN=rpoC PE=3
           SV=1
          Length = 1502

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 242 TQPLSCKY*EFKFNHVSPPSSTHHYWGLVIRVEVLVLRTMAP-MDVLSCDE 391
           T PL   +   KF+  SP S   H  G V++ E +  RT  P  D L C++
Sbjct: 7   TSPLKGDFSRIKFSIASPESILAHSRGEVLKPETINYRTFKPERDGLMCEK 57


>sp|Q8H1R4|NAP13_ARATH Non-intrinsic ABC protein 13, chloroplastic
           OS=Arabidopsis thaliana GN=NAP13 PE=1 SV=1
          Length = 271

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 157 GQKSCFAVSGALGQTTKYLLASTLPLFVDAAFVM*VLR 270
           GQK   A++GAL +  K LL   L  F+D +  M V++
Sbjct: 169 GQKQRIAIAGALAEACKVLLLDELTTFLDESDQMGVIK 206


>sp|Q9LUL4|SRF7_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 7
           OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1
          Length = 717

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 219 KYASTICGRSLCHVSIKSSSLIMYHHLVPHTTIGG 323
           +Y   +C  S+ H +IKS+++++   L PH +  G
Sbjct: 533 EYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSG 567

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914870|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_G07.
         (410 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8PYG1|A8PYG1_BRUMA Rhodanese-like domain containing protein ...    33   7.1  
tr|A7T4Z9|A7T4Z9_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.1  

>tr|A8PYG1|A8PYG1_BRUMA Rhodanese-like domain containing protein
           OS=Brugia malayi GN=Bm1_38100 PE=4 SV=1
          Length = 458

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
 Frame = +2

Query: 62  YEWDNHFISNFCANWPXXXXXXXXXXXXAGVMARN---RVLLFQELLDKLQSTYLQVRFH 232
           Y WD   +S+  +++P            AG++ ++    +LLF +L D      +Q   +
Sbjct: 251 YVWDVLLLSD--SSFPLFVGLAIMEQLRAGLITKHFNDAILLFSDLPDLNMERLVQYSLN 308

Query: 233 YLWTQPLSCKY*EFKFNHVSPPSSTHHY 316
           Y    P SC + +F   HV    +  HY
Sbjct: 309 YYNAVPASCTFRQFASKHVREEYAMTHY 336


>tr|A7T4Z9|A7T4Z9_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g146148 PE=4 SV=1
          Length = 80

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 174 CCFRSSWTNYKVPTCKYASTICGRSLCHVSIKSSSL 281
           C + SS T+YK+  C Y S+     LCH + +SS L
Sbjct: 37  CTYESSPTSYKLCHCTYESSPLSYKLCHCTYESSPL 72