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NBDC - LSDB Archive
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BP914874
Clone id YMU001_000063_G12
Library
Length 222
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000063_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACGATGAATCTCCCGGTCTACATGCTGTGCCTATTGATATTGATTATGGGCACGGGAACG
GGATCCTTAACAGCAGCGCATGCTGTAACCGGGAATGTGAACTGCGTCTCTATCAACTTC
AAGTTCATCCCTTGCTTCTCCTACCTTACCGATAAGTCCCTTCTACCAGCTGCCCCTTCG
TAGTCTTGCTGCACCAACGTGATGGCCCTCAATACCCAATTT
■■Homology search results ■■ -
sp_hit_id Q42641
Definition sp|Q42641|NLTPA_BRAOT Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica
Align length 67
Score (bit) 39.7
E-value 0.005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914874|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_G12.
         (222 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42641|NLTPA_BRAOT Non-specific lipid-transfer protein A OS=B...    40   0.005
sp|Q39950|NLTP_HELAN Non-specific lipid-transfer protein OS=Heli...    35   0.088
sp|Q2QYL2|NLT2B_ORYSJ Non-specific lipid-transfer protein 2B OS=...    34   0.20 
sp|A2ZAT0|NLTP2_ORYSI Non-specific lipid-transfer protein 2 OS=O...    33   0.43 
sp|Q7XJ39|NLT2A_ORYSJ Non-specific lipid-transfer protein 2A OS=...    33   0.43 
sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinu...    32   0.74 
sp|Q9ZUK6|NLTP7_ARATH Non-specific lipid-transfer protein 7 OS=A...    32   0.74 
sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3 OS=O...    32   0.74 
sp|A2ZAS9|NLTP3_ORYSI Non-specific lipid-transfer protein 3 OS=O...    32   0.74 
sp|Q43194|NLTP2_SORBI Non-specific lipid-transfer protein 2 OS=S...    32   1.3  
sp|Q42615|NLTP2_BRANA Non-specific lipid-transfer protein 2 OS=B...    30   2.8  
sp|P07597|NLTP1_HORVU Non-specific lipid-transfer protein 1 OS=H...    30   2.8  
sp|Q39794|NLTP_GERHY Non-specific lipid-transfer protein OS=Gerb...    30   3.7  
sp|Q9LLR7|NLTP3_ARATH Non-specific lipid-transfer protein 3 OS=A...    30   3.7  
sp|Q9M5X6|NLTP_PYRCO Non-specific lipid-transfer protein OS=Pyru...    30   4.8  
sp|P0C088|NLTP_ARTVU Non-specific lipid-transfer protein (Fragme...    30   4.8  
sp|Q9SCZ0|NLTPC_ARATH Non-specific lipid-transfer protein 12 OS=...    29   6.3  
sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea ...    29   8.2  
sp|Q9XFS7|NLTP5_ARATH Non-specific lipid-transfer protein 5 OS=A...    29   8.2  

>sp|Q42641|NLTPA_BRAOT Non-specific lipid-transfer protein A
           OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1
          Length = 118

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +1

Query: 16  VYMLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCT 195
           V  L  L+L      G +TA  A+T    C ++N    PC  Y+T    LP A    CCT
Sbjct: 4   VMKLACLVLACMIVAGPITANRALT----CGTVNSNVAPCIGYITQGGTLPGA----CCT 55

Query: 196 NVMALNT 216
            V  LN+
Sbjct: 56  GVSKLNS 62


>sp|Q39950|NLTP_HELAN Non-specific lipid-transfer protein
           OS=Helianthus annuus PE=3 SV=1
          Length = 116

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 22  MLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNV 201
           M  + ++++  G   +      T  ++C  ++    PC SYLT    +P A    CC+ V
Sbjct: 1   MAKMAMMVLCAGVTCMVVGAPYTEALSCGQVSSSLAPCISYLTKGGAVPPA----CCSGV 56

Query: 202 MALNT 216
            +LN+
Sbjct: 57  KSLNS 61


>sp|Q2QYL2|NLT2B_ORYSJ Non-specific lipid-transfer protein 2B
           OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1
          Length = 117

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +1

Query: 34  LILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALN 213
           L+L+       L   H     ++C  +N    PC SY    S     PS +CC+ V +LN
Sbjct: 6   LVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGS----GPSAACCSGVRSLN 61

Query: 214 T 216
           +
Sbjct: 62  S 62


>sp|A2ZAT0|NLTP2_ORYSI Non-specific lipid-transfer protein 2
           OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1
          Length = 118

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 67  LTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALNT 216
           L   H     ++C  +N    PC SY    S     PS +CC+ V +LN+
Sbjct: 18  LAGPHTTMAAISCGQVNSAVSPCLSYARGGS----GPSAACCSGVRSLNS 63


>sp|Q7XJ39|NLT2A_ORYSJ Non-specific lipid-transfer protein 2A
           OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2
          Length = 118

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 67  LTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALNT 216
           L   H     ++C  +N    PC SY    S     PS +CC+ V +LN+
Sbjct: 18  LAGPHTTMAAISCGQVNSAVSPCLSYARGGS----GPSAACCSGVRSLNS 63


>sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinus
           taeda PE=2 SV=1
          Length = 123

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +1

Query: 16  VYMLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCT 195
           V+++ L++ +M     ++  A  V G ++C  +     PC +YL   +  PAA   +CC 
Sbjct: 10  VFVVGLVVTMM-----NVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAA---TCCP 61

Query: 196 NVMALNTQ 219
           ++  L++Q
Sbjct: 62  SIRGLDSQ 69


>sp|Q9ZUK6|NLTP7_ARATH Non-specific lipid-transfer protein 7
           OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1
          Length = 123

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 34  LILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALN 213
           L+ +     G +TA  A++    C  +N    PC  YLT+  +   +P   CC  V  LN
Sbjct: 10  LVFVFVIAAGPITAKAALS----CGEVNSNLKPCTGYLTNGGI--TSPGPQCCNGVRKLN 63


>sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3
           OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1
          Length = 121

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 76  AHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALN 213
           A   +  V+C  +     PC SY+  +    ++PS SCC+ V  LN
Sbjct: 23  AERASAAVSCGDVTSSIAPCLSYVMGRE---SSPSSSCCSGVRTLN 65


>sp|A2ZAS9|NLTP3_ORYSI Non-specific lipid-transfer protein 3
           OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1
          Length = 121

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 76  AHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALN 213
           A   +  V+C  +     PC SY+  +    ++PS SCC+ V  LN
Sbjct: 23  AERASAAVSCGDVTSSIAPCLSYVMGRE---SSPSSSCCSGVRTLN 65


>sp|Q43194|NLTP2_SORBI Non-specific lipid-transfer protein 2
           OS=Sorghum bicolor GN=LTP2 PE=3 SV=1
          Length = 122

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +1

Query: 25  LCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVM 204
           L + I ++      + AA      V C  ++    PC SY   +    + PS  CC+ V 
Sbjct: 7   LAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQG---SGPSAGCCSGVR 63

Query: 205 ALNT 216
           +LN+
Sbjct: 64  SLNS 67
tr_hit_id Q7EZR3
Definition tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza sativa subsp. japonica
Align length 55
Score (bit) 40.4
E-value 0.045
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914874|Adiantum capillus-veneris mRNA, clone:
YMU001_000063_G12.
         (222 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Or...    40   0.045
tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Or...    40   0.045
tr|Q2PCB9|Q2PCB9_WHEAT Non-specific lipid-transfer protein OS=Tr...    39   0.13 
tr|Q5NE30|Q5NE30_WHEAT Non-specific lipid-transfer protein OS=Tr...    38   0.22 
tr|Q2PCD9|Q2PCD9_WHEAT Non-specific lipid-transfer protein OS=Tr...    38   0.29 
tr|O82582|O82582_BRAOL Non-specific lipid-transfer protein OS=Br...    38   0.29 
tr|Q5NE33|Q5NE33_WHEAT Non-specific lipid-transfer protein OS=Tr...    37   0.50 
tr|Q2PCD4|Q2PCD4_WHEAT Non-specific lipid-transfer protein OS=Tr...    37   0.50 
tr|Q2PCD7|Q2PCD7_WHEAT Non-specific lipid-transfer protein OS=Tr...    37   0.65 
tr|B8A3E0|B8A3E0_MAIZE Putative uncharacterized protein OS=Zea m...    36   0.84 
tr|B6T1X4|B6T1X4_MAIZE Nonspecific lipid-transfer protein 4 OS=Z...    36   0.84 
tr|B6SKH5|B6SKH5_MAIZE Nonspecific lipid-transfer protein 2 OS=Z...    36   0.84 
tr|B6SJ07|B6SJ07_MAIZE Nonspecific lipid-transfer protein 4 OS=Z...    36   0.84 
tr|Q2PCE0|Q2PCE0_WHEAT Non-specific lipid-transfer protein OS=Tr...    36   1.1  
tr|A9TIN3|A9TIN3_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.9  
tr|A9NY54|A9NY54_PICSI Non-specific lipid-transfer protein OS=Pi...    35   1.9  
tr|A9NL65|A9NL65_PICSI Non-specific lipid-transfer protein OS=Pi...    35   1.9  
tr|A9S677|A9S677_PHYPA Non-specific lipid-transfer protein OS=Ph...    34   3.2  
tr|Q6E0V1|Q6E0V1_NICGL Non-specific lipid-transfer protein OS=Ni...    33   5.5  
tr|B4YYA8|B4YYA8_THEHA ST20 OS=Thellungiella halophila PE=4 SV=1       33   5.5  
tr|A9NKD5|A9NKD5_PICSI Non-specific lipid-transfer protein OS=Pi...    33   5.5  
tr|Q9AXZ6|Q9AXZ6_PINRE Non-specific lipid-transfer protein OS=Pi...    33   7.1  
tr|Q9ATH2|Q9ATH2_CORAV Non-specific lipid-transfer protein OS=Co...    33   7.1  
tr|Q6WAT8|Q6WAT8_9FABA Non-specific lipid-transfer protein OS=Vi...    33   7.1  
tr|Q6TKQ7|Q6TKQ7_VITAE Non-specific lipid-transfer protein OS=Vi...    33   7.1  
tr|Q6E0V0|Q6E0V0_NICGL Non-specific lipid-transfer protein OS=Ni...    33   7.1  
tr|Q0Z8V0|Q0Z8V0_RUBID Non-specific lipid-transfer protein OS=Ru...    33   7.1  
tr|B6SKX2|B6SKX2_MAIZE Nonspecific lipid-transfer protein 3 OS=Z...    33   7.1  
tr|B5B9W6|B5B9W6_9FABA Lipid transfer protein OS=Vigna radiata G...    33   7.1  
tr|A3C7Z3|A3C7Z3_ORYSJ Non-specific lipid-transfer protein OS=Or...    33   7.1  

>tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza
           sativa subsp. japonica GN=P0582D05.140 PE=3 SV=1
          Length = 120

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 61  GSLTAAHAVT---GNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALNT 216
           G L AA AV+   G V C  ++   +PC +YLT K+   AAPS  CC  V  L T
Sbjct: 14  GCLLAAAAVSVVDGAVTCGDVDASLLPCVAYLTGKA---AAPSGDCCAGVRHLRT 65


>tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Oryza
           sativa subsp. indica GN=OsI_27706 PE=3 SV=1
          Length = 169

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 61  GSLTAAHAVT---GNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALNT 216
           G L AA AV+   G V C  ++   +PC +YLT K+   AAPS  CC  V  L T
Sbjct: 14  GCLLAAAAVSVVDGAVTCGDVDASLLPCVAYLTGKA---AAPSGDCCAGVRHLRT 65


>tr|Q2PCB9|Q2PCB9_WHEAT Non-specific lipid-transfer protein
           OS=Triticum aestivum GN=ltp9.3d PE=3 SV=1
          Length = 117

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +1

Query: 22  MLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNV 201
           M  + +L +     +L  A   +G V C  +     PC SY T K+   +APS  CC+ V
Sbjct: 1   MARMALLAVFAVLAALAVAEMASGAVTCGDVTSAIAPCMSYATGKA---SAPSAGCCSGV 57

Query: 202 MALN 213
             LN
Sbjct: 58  RTLN 61


>tr|Q5NE30|Q5NE30_WHEAT Non-specific lipid-transfer protein
           OS=Triticum aestivum GN=ltp9.3 PE=3 SV=1
          Length = 117

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +1

Query: 22  MLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNV 201
           M  + +L + T   +L  A   +G V C  +     PC SY T ++   ++PS  CC+ V
Sbjct: 1   MARVALLAVFTVLAALAVAEMASGAVTCSDVTSAIAPCMSYATGQA---SSPSAGCCSGV 57

Query: 202 MALN 213
             LN
Sbjct: 58  RTLN 61


>tr|Q2PCD9|Q2PCD9_WHEAT Non-specific lipid-transfer protein
           OS=Triticum aestivum GN=ltp9.3c PE=3 SV=1
          Length = 117

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +1

Query: 22  MLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNV 201
           M  + +L++ T   +L  A   +G V C  +     PC SY T ++   ++PS  CC+ V
Sbjct: 1   MARVALLVVFTVLATLAVAEMASGAVTCGDVMSAIPPCMSYATGQA---SSPSAGCCSGV 57

Query: 202 MALN 213
             LN
Sbjct: 58  RTLN 61


>tr|O82582|O82582_BRAOL Non-specific lipid-transfer protein
           OS=Brassica oleracea GN=wax9E PE=3 SV=1
          Length = 118

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +1

Query: 16  VYMLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCT 195
           V  L  L+L      G +TA  A+T    C ++N    PC  Y+T    LP A    CCT
Sbjct: 4   VMKLACLVLACMIVAGPITANAALT----CGTVNSNVAPCIGYITQGGPLPRA----CCT 55

Query: 196 NVMALNT 216
            V  LN+
Sbjct: 56  GVSKLNS 62


>tr|Q5NE33|Q5NE33_WHEAT Non-specific lipid-transfer protein
           OS=Triticum aestivum GN=ltp9.5 PE=3 SV=1
          Length = 115

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 64  SLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALNTQ 219
           +L  A   +G V C  +     PC SY + K+   +APS +CC+ V  LN +
Sbjct: 15  ALAVADMASGAVTCGDVTSAVAPCMSYASGKA---SAPSGACCSGVRTLNAK 63


>tr|Q2PCD4|Q2PCD4_WHEAT Non-specific lipid-transfer protein
           OS=Triticum aestivum GN=ltp9.3g PE=3 SV=1
          Length = 115

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 64  SLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNVMALNTQ 219
           +L  A   +G V C  +     PC SY T ++   +APS  CC+ V  LN +
Sbjct: 15  ALAVAEMASGAVTCGDVTSAVAPCMSYATGQT---SAPSAGCCSGVRTLNAK 63


>tr|Q2PCD7|Q2PCD7_WHEAT Non-specific lipid-transfer protein
           OS=Triticum aestivum GN=ltp9.3e PE=3 SV=1
          Length = 117

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +1

Query: 22  MLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNV 201
           M  + +L + +   +L  A   +G V C  +     PC SY T ++   ++PS  CC+ V
Sbjct: 1   MARVALLAVFSVLAALAVAEMASGAVTCSDVTSAIAPCMSYATGQA---SSPSAGCCSGV 57

Query: 202 MALN 213
             LN
Sbjct: 58  RTLN 61


>tr|B8A3E0|B8A3E0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 140

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = +1

Query: 22  MLCLLILIMGTGTGSLTAAHAVTGNVNCVSINFKFIPCFSYLTDKSLLPAAPS*SCCTNV 201
           +L   +L++  G G+ +AA      V+C  +     PC  Y    +   A+PS +CC+ V
Sbjct: 18  VLAAALLLLAAGAGTASAA------VSCGEVTSSVAPCLGYAMGSA---ASPSAACCSGV 68

Query: 202 MALNTQ 219
            +LN++
Sbjct: 69  RSLNSR 74