BP914877 |
Clone id |
YMU001_000063_H03 |
Library |
YMU01 |
Length |
575 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000063_H03. |
Accession |
BP914877 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL835Contig1 |
Sequence |
AGCATTAGAGGCAAACAGGGCAGCAGCCATAATGGCTGGCAAGGCTGTAGTTGTGCGTCA TAAAACAAAAGGCAGGGATAAGCCGACAAAGCGGCAAAAGCGAAAGCAAATGAATATCAT CACGGCCAAGAGGCCGTTGATTGAAGCTCAGATTCGGTCGTCTTCTGTAAAGAAAGCAAA AACTGAGGATGAGTCTGTTCCTCGAGCTTTAAAACGTTTTACTTGAGATGCAGAAAACAG GCTTTGCAGAAAAATTTGATCTACCAGACTGTTGAAATCAACAGTTAAGCTGTATGGTCT GCTATTTATGGACCTTGGAGTTATTTTGGGATTTCACGTGTTCTCGAGACAATTGCAAAT CAGCTTCTGATCACTAAGACAGGTTCTCCATGTTCATGAAGCGTTGTGGTCACTTGGGCT TTTCTGCAAGTGATGAATTTTGTCGCGGCTCCTATCCGCCCCATAGTCACGGCTCACATC AACTCATGTTTGCAAGGCAATGTTCAACCAAATGCTACCAGAAGGATGCAAATTGAGGCA CTTCTTTGCATGATAAGCTTTGAAGCTTGGAAAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9P2D1 |
Definition |
sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens |
Align length |
43 |
Score (bit) |
34.3 |
E-value |
0.46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S395 |
Definition |
tr|A9S395|A9S395_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
78 |
Score (bit) |
61.2 |
E-value |
4.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914877|Adiantum capillus-veneris mRNA, clone: YMU001_000063_H03. (575 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S395|A9S395_PHYPA Predicted protein OS=Physcomitrella paten... 61 4e-08 tr|Q9LPP3|Q9LPP3_ARATH F18K10.11 protein (Putative uncharacteriz... 54 6e-06 tr|Q9CAF0|Q9CAF0_ARATH Putative uncharacterized protein F13M14.1... 54 6e-06 tr|B4F9L8|B4F9L8_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05 tr|A7PHT9|A7PHT9_VITVI Chromosome chr13 scaffold_17, whole genom... 50 7e-05 tr|Q9LGT2|Q9LGT2_ORYSJ cDNA clone:J023063M08, full insert sequen... 50 9e-05 tr|B8ADL8|B8ADL8_ORYSI Putative uncharacterized protein OS=Oryza... 50 9e-05 tr|A2ZQ14|A2ZQ14_ORYSJ Putative uncharacterized protein OS=Oryza... 50 9e-05 tr|A8IJG8|A8IJG8_CHLRE Predicted protein OS=Chlamydomonas reinha... 42 0.018 tr|A1D627|A1D627_NEOFI Mis12-Mtw1 protein, putative OS=Neosartor... 35 2.9 tr|Q7X504|Q7X504_9LEPT LigB OS=Leptospira kirschneri serovar Gri... 34 5.0 tr|B8P8S7|B8P8S7_9APHY Predicted protein OS=Postia placenta Mad-... 34 6.5 tr|B5TXC6|B5TXC6_LEPIN LigB (Fragment) OS=Leptospira interrogans... 33 8.6 tr|Q6ZWF9|Q6ZWF9_HUMAN cDNA FLJ41163 fis, clone BRACE2039734 (Fr... 33 8.6
>tr|A9S395|A9S395_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208212 PE=4 SV=1 Length = 543
Score = 61.2 bits (147), Expect = 4e-08 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 7/78 (8%) Frame = +2
Query: 8 EANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITA----KRPLIEAQIRSSSVKK 175 EAN+A AI AGK V + K KG++KP++R K+KQ+N+ITA KR L+ Q +S S K Sbjct: 464 EANKANAIAAGKEVKEKKKMKGKNKPSRRHKKKQLNVITAEMQIKRDLMAKQ-KSDSKKP 522
Query: 176 AKT---EDESVPRALKRF 220 T D S+P AL+RF Sbjct: 523 TTTVEVNDTSLPLALERF 540
>tr|Q9LPP3|Q9LPP3_ARATH F18K10.11 protein (Putative uncharacterized protein At3g10530) OS=Arabidopsis thaliana GN=At3g10530 PE=2 SV=1 Length = 536
Score = 53.9 bits (128), Expect = 6e-06 Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Frame = +2
Query: 5 LEANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSSSVKKAKT 184 +EA + AI A K+ +++KTKGR+KP+KR K+K+ + AKR E + ++ K+ Sbjct: 459 IEAEKEVAIEAAKSTELKNKTKGRNKPSKRTKKKKEMVENAKRTFPEQEHNTAIKKRRIV 518
Query: 185 EDES--VPRALKRF 220 ED + +P +LKRF Sbjct: 519 EDAAAELPTSLKRF 532
>tr|Q9CAF0|Q9CAF0_ARATH Putative uncharacterized protein F13M14.19 OS=Arabidopsis thaliana GN=F13M14.19 PE=4 SV=1 Length = 548
Score = 53.9 bits (128), Expect = 6e-06 Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Frame = +2
Query: 5 LEANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSSSVKKAKT 184 +EA + AI A K+ +++KTKGR+KP+KR K+K+ + AKR E + ++ K+ Sbjct: 471 IEAEKEVAIEAAKSTELKNKTKGRNKPSKRTKKKKEMVENAKRTFPEQEHNTAIKKRRIV 530
Query: 185 EDES--VPRALKRF 220 ED + +P +LKRF Sbjct: 531 EDAAAELPTSLKRF 544
>tr|B4F9L8|B4F9L8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 507
Score = 52.8 bits (125), Expect = 1e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2
Query: 5 LEANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSSSVKKAKT 184 +E A A+ A K + KTKGR KP+KR K+K+ ++ AKRP +E + K Sbjct: 430 IEEEMADAVEAAKNTERKKKTKGRSKPSKRAKKKEEDVFKAKRPFLEQSDKVDGRPDKKQ 489
Query: 185 EDESVPRALKRF 220 +P+AL+RF Sbjct: 490 RIGELPKALQRF 501
>tr|A7PHT9|A7PHT9_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018070001 PE=4 SV=1 Length = 540
Score = 50.4 bits (119), Expect = 7e-05 Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%) Frame = +2
Query: 8 EANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSS--SVKKAK 181 +A AA+ K++ +R K KG++KP+K+ K+++ + AK+P +E Q+ S KK K Sbjct: 460 KAEMEAAVEDAKSIPLRKKMKGKNKPSKKVKKREEAVARAKKPFLERQMEEENLSTKKQK 519
Query: 182 TEDE-SVPRALKRF 220 E +P++L+RF Sbjct: 520 ISGEIELPKSLQRF 533
>tr|Q9LGT2|Q9LGT2_ORYSJ cDNA clone:J023063M08, full insert sequence OS=Oryza sativa subsp. japonica GN=P0489A01.9 PE=2 SV=1 Length = 534
Score = 50.1 bits (118), Expect = 9e-05 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2
Query: 5 LEANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSS---SVKK 175 +E A+ A K++ + KTKGR K +KR K+++ ++ AKRP +E + K+ Sbjct: 455 IEEEMEDAVEAAKSIEFKKKTKGRSKASKRAKKREEEVLKAKRPFLEQHKENDGRPDKKQ 514
Query: 176 AKTEDESVPRALKRF 220 +E+ +P+AL+RF Sbjct: 515 RVSEEIELPKALQRF 529
>tr|B8ADL8|B8ADL8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00668 PE=4 SV=1 Length = 534
Score = 50.1 bits (118), Expect = 9e-05 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2
Query: 5 LEANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSS---SVKK 175 +E A+ A K++ + KTKGR K +KR K+++ ++ AKRP +E + K+ Sbjct: 455 IEEEMEDAVEAAKSIEFKKKTKGRSKASKRAKKREEEVLKAKRPFLEQHKENDGRPDKKQ 514
Query: 176 AKTEDESVPRALKRF 220 +E+ +P+AL+RF Sbjct: 515 RVSEEIELPKALQRF 529
>tr|A2ZQ14|A2ZQ14_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000636 PE=4 SV=1 Length = 560
Score = 50.1 bits (118), Expect = 9e-05 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Frame = +2
Query: 5 LEANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSS---SVKK 175 +E A+ A K++ + KTKGR K +KR K+++ ++ AKRP +E + K+ Sbjct: 481 IEEEMEDAVEAAKSIEFKKKTKGRSKASKRAKKREEEVLKAKRPFLEQHKENDGRPDKKQ 540
Query: 176 AKTEDESVPRALKRF 220 +E+ +P+AL+RF Sbjct: 541 RVSEEIELPKALQRF 555
>tr|A8IJG8|A8IJG8_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_144515 PE=4 SV=1 Length = 543
Score = 42.4 bits (98), Expect = 0.018 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 8/79 (10%) Frame = +2
Query: 8 EANRAAAIMAGKAVVVRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSSSVKKAKTE 187 +AN A + + K KG++KP++R ++KQ NII ++P I+ + + + ++ + Sbjct: 462 DANAARMAALRREQENKVKMKGKNKPSRRHRKKQSNIIEDRKPTIKERQKEEATRRKEAA 521
Query: 188 D--------ESVPRALKRF 220 ES P+A++RF Sbjct: 522 QKKADSVIPESAPKAVRRF 540
>tr|A1D627|A1D627_NEOFI Mis12-Mtw1 protein, putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_063320 PE=4 SV=1 Length = 587
Score = 35.0 bits (79), Expect = 2.9 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = +2
Query: 53 VRHKTKGRDKPTKRQKRKQMNIITAKRPLIEAQIRSSSVKKAKTEDESVPRALKR 217 V H K + KRQ R++ + +T P ++ RSS+ K+ +T ESVP+ KR Sbjct: 143 VEHTEKSAEVTGKRQTRRRRSAVTEPEPQPQSVTRSSTRKREET--ESVPKEKKR 195
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