BP914887
Clone id YMU001_000064_A06
Library
Length 348
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTTCTGTATGTCAAGGGTCAAAGCATTTGATTAAGTGCATACAAATTCTATTGGCTAA
ATCCCAACAGCATCAGTTTCAAGTCCCAAGATAAAAAGAGAACATCTTGATGAGGGACAT
CGTGAAAATCAGGTCATACCAATCAAGCAATTATTGCACTGAACCTTCTCTCCACACAAC
CACTGACAGCCAATTAAGTAAAGCATTTTGTTATGCTACTGTATATTCCCAAAATCCGAA
TGGCAAATCATGAGAAATGACTTATCAATTCAACTTGCAAAGATATGGCCGGCTCGTAAA
GCGACGCCCATTGCTTCGAACCAAGGCCGTAATAACTATAGTCAAGGT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914887|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_A06.
(348 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A7QHP7
Definition tr|A7QHP7|A7QHP7_VITVI Chromosome chr8 scaffold_99, whole genome shotgun sequence OS=Vitis vinifera
Align length 25
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914887|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_A06.
(348 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QHP7|A7QHP7_VITVI Chromosome chr8 scaffold_99, whole genome... 35 2.4
tr|A5BMH3|A5BMH3_VITVI Putative uncharacterized protein OS=Vitis... 35 2.4
tr|B8LL30|B8LL30_PICSI Putative uncharacterized protein OS=Picea... 33 9.2

>tr|A7QHP7|A7QHP7_VITVI Chromosome chr8 scaffold_99, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00038873001
PE=4 SV=1
Length = 97

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1

Query: 345 LTIVITALVRSNGRRFTSRPYLCKL 271
LT +TA+V+ NGR+F SRP LC+L
Sbjct: 72 LTAGVTAVVKINGRQFCSRPRLCRL 96


>tr|A5BMH3|A5BMH3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027268 PE=4 SV=1
Length = 586

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1

Query: 345 LTIVITALVRSNGRRFTSRPYLCKL 271
LT +TA+V+ NGR+F SRP LC+L
Sbjct: 561 LTAGVTAVVKINGRQFCSRPRLCRL 585


>tr|B8LL30|B8LL30_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 573

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1

Query: 345 LTIVITALVRSNGRRFTSRPYLCKL 271
+T + A+V++NGR F SRP LCKL
Sbjct: 548 VTAGVMAIVKANGRLFCSRPRLCKL 572