BP914890 |
Clone id |
YMU001_000064_A10 |
Library |
YMU01 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_A10. |
Accession |
BP914890 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL823Contig1 |
Sequence |
AACCTCCTGGTAAGTGCTTCCGAACTGAGTCCCTATATGCCTCAAGTTTGTCCCTCTCTT CCTGTAAGAATCTCTTTGACAAACGCCGAGGCTTTCCAAGAGACCCTCGTATTACACCCC ATTCAGCTCGAGTAAGCCTTGGCACATGACCAAGTCTTGCATGATTGAGGTATTCAACAA ACTCGTTCCTTGCAAACCATGGAAGATCAATCGCACTATAAAACCATTCATAGGTACACC ACCGCCTAACTTTCTCAGATGAGAGGCAATGAGTAAGCCTAACCTTATTACTATATTTCT CTTCTGCCACCACTGCATGTGAGCAATGACAAGTGGCTACTGATAGTGCAGAAGACTTGG ACTTCTGCCTGCTTCTTTGTTTTCTAAAAGTGTAGTTCATTCTTTCTACTGCAGGACCTA TCTCTACTTCTGATTCACCAATAACCACATCTTGTCGATCAAGCTCTTGATCCGGCTCCT GTTTAACAGGCTTCGCTGCGTACTTGCCTAGGGTTTGTCCCTGCACAACTCGTTTCAGCT TGGTACGAGCCATCAGATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8C735 |
Definition |
sp|Q8C735|LIN9_MOUSE Lin-9 homolog OS=Mus musculus |
Align length |
99 |
Score (bit) |
76.3 |
E-value |
1.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RVZ7 |
Definition |
tr|A9RVZ7|A9RVZ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
104 |
Score (bit) |
165.0 |
E-value |
2.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914890|Adiantum capillus-veneris mRNA, clone: YMU001_000064_A10. (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RVZ7|A9RVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 165 2e-39 tr|Q6AUE7|Q6AUE7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 158 2e-37 tr|Q10G93|Q10G93_ORYSJ DIRP family protein, expressed OS=Oryza s... 158 2e-37 tr|Q10G92|Q10G92_ORYSJ DIRP family protein, expressed OS=Oryza s... 158 2e-37 tr|Q0DQ40|Q0DQ40_ORYSJ Os03g0639200 protein OS=Oryza sativa subs... 158 2e-37 tr|B8AN37|B8AN37_ORYSI Putative uncharacterized protein OS=Oryza... 158 2e-37 tr|Q9LIF3|Q9LIF3_ARATH Genomic DNA, chromosome 3, P1 clone:MHC9 ... 150 6e-35 tr|Q6A332|Q6A332_ARATH Always early protein 3 OS=Arabidopsis tha... 150 6e-35 tr|Q0WLW8|Q0WLW8_ARATH Putative uncharacterized protein At3g2143... 150 6e-35 tr|A7NW60|A7NW60_VITVI Chromosome chr5 scaffold_2, whole genome ... 148 2e-34 tr|A5AVL5|A5AVL5_VITVI Putative uncharacterized protein OS=Vitis... 148 2e-34 tr|Q6A331|Q6A331_ARATH Always early 1 protein OS=Arabidopsis tha... 147 5e-34 tr|Q5SNG2|Q5SNG2_ORYSJ Always early 1 protein-like OS=Oryza sati... 137 5e-31 tr|Q0JPY1|Q0JPY1_ORYSJ Os01g0193900 protein (Fragment) OS=Oryza ... 137 5e-31 tr|B8ADQ4|B8ADQ4_ORYSI Putative uncharacterized protein OS=Oryza... 137 5e-31 tr|A2ZQ81|A2ZQ81_ORYSJ Putative uncharacterized protein OS=Oryza... 137 5e-31 tr|A9SYB3|A9SYB3_PHYPA Predicted protein OS=Physcomitrella paten... 136 9e-31 tr|A7PS74|A7PS74_VITVI Chromosome chr14 scaffold_27, whole genom... 133 7e-30 tr|Q9MA51|Q9MA51_ARATH F22F7.18 protein OS=Arabidopsis thaliana ... 131 3e-29 tr|Q8RXZ0|Q8RXZ0_ARATH Putative uncharacterized protein At3g0538... 131 3e-29 tr|Q6A333|Q6A333_ARATH Always early 2 protein OS=Arabidopsis tha... 131 3e-29 tr|Q4RR02|Q4RR02_TETNG Chromosome 14 SCAF15003, whole genome sho... 78 4e-13 tr|B1H1U1|B1H1U1_XENLA LOC100158306 protein OS=Xenopus laevis GN... 77 8e-13 tr|Q5ZMF8|Q5ZMF8_CHICK Putative uncharacterized protein OS=Gallu... 76 1e-12 tr|Q8IWQ2|Q8IWQ2_HUMAN TGS1 OS=Homo sapiens PE=2 SV=1 76 1e-12 tr|Q8IWQ1|Q8IWQ1_HUMAN TGS2 OS=Homo sapiens PE=2 SV=1 76 1e-12 tr|Q6P142|Q6P142_HUMAN LIN9 protein (Fragment) OS=Homo sapiens G... 76 1e-12 tr|B1B046|B1B046_HUMAN Lin-9 homolog (C. elegans) OS=Homo sapien... 76 1e-12 tr|B1ANK3|B1ANK3_HUMAN Lin-9 homolog (C. elegans) OS=Homo sapien... 76 1e-12 tr|Q08BJ0|Q08BJ0_DANRE Lin9 protein OS=Danio rerio GN=lin9 PE=2 ... 73 9e-12
>tr|A9RVZ7|A9RVZ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161252 PE=4 SV=1 Length = 1323
Score = 165 bits (417), Expect = 2e-39 Identities = 79/104 (75%), Positives = 83/104 (79%) Frame = -2
Query: 325 CSHAVVAEEKYSNKVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGH 146 C H S K ++ HCL KVRRWC EWFYSAIDLPWFARNEFVEYLNHA LGH Sbjct: 678 CPHTTPELGTDSAKAKIIHCLCP-KVRRWCMCEWFYSAIDLPWFARNEFVEYLNHAGLGH 736
Query: 145 VPRLTRAEWGVIRGSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 VPRLTR EWGVIRGSLGKPRRLSKRFLQEER+KLE YR+SVR H Sbjct: 737 VPRLTRVEWGVIRGSLGKPRRLSKRFLQEEREKLETYRESVRTH 780
>tr|Q6AUE7|Q6AUE7_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBb0029I19.5 PE=4 SV=1 Length = 1251
Score = 158 bits (400), Expect = 2e-37 Identities = 70/91 (76%), Positives = 80/91 (87%) Frame = -2
Query: 286 KVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIR 107 K L+HCLSS +RRWCT+EWFYSAID PWF ++EFVEYLNH +LGHVPRLTR EWGVIR Sbjct: 690 KDSLSHCLSSRLLRRWCTFEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIR 749
Query: 106 GSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 SLGKPRRLSK+FLQEER+KL YR+SVR+H Sbjct: 750 SSLGKPRRLSKQFLQEEREKLAQYRESVRQH 780
>tr|Q10G93|Q10G93_ORYSJ DIRP family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g43800 PE=4 SV=1 Length = 1255
Score = 158 bits (400), Expect = 2e-37 Identities = 70/91 (76%), Positives = 80/91 (87%) Frame = -2
Query: 286 KVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIR 107 K L+HCLSS +RRWCT+EWFYSAID PWF ++EFVEYLNH +LGHVPRLTR EWGVIR Sbjct: 694 KDSLSHCLSSRLLRRWCTFEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIR 753
Query: 106 GSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 SLGKPRRLSK+FLQEER+KL YR+SVR+H Sbjct: 754 SSLGKPRRLSKQFLQEEREKLAQYRESVRQH 784
>tr|Q10G92|Q10G92_ORYSJ DIRP family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g43800 PE=4 SV=1 Length = 1246
Score = 158 bits (400), Expect = 2e-37 Identities = 70/91 (76%), Positives = 80/91 (87%) Frame = -2
Query: 286 KVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIR 107 K L+HCLSS +RRWCT+EWFYSAID PWF ++EFVEYLNH +LGHVPRLTR EWGVIR Sbjct: 694 KDSLSHCLSSRLLRRWCTFEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIR 753
Query: 106 GSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 SLGKPRRLSK+FLQEER+KL YR+SVR+H Sbjct: 754 SSLGKPRRLSKQFLQEEREKLAQYRESVRQH 784
>tr|Q0DQ40|Q0DQ40_ORYSJ Os03g0639200 protein OS=Oryza sativa subsp. japonica GN=Os03g0639200 PE=4 SV=1 Length = 1272
Score = 158 bits (400), Expect = 2e-37 Identities = 70/91 (76%), Positives = 80/91 (87%) Frame = -2
Query: 286 KVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIR 107 K L+HCLSS +RRWCT+EWFYSAID PWF ++EFVEYLNH +LGHVPRLTR EWGVIR Sbjct: 699 KDSLSHCLSSRLLRRWCTFEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIR 758
Query: 106 GSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 SLGKPRRLSK+FLQEER+KL YR+SVR+H Sbjct: 759 SSLGKPRRLSKQFLQEEREKLAQYRESVRQH 789
>tr|B8AN37|B8AN37_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12754 PE=4 SV=1 Length = 979
Score = 158 bits (400), Expect = 2e-37 Identities = 70/91 (76%), Positives = 80/91 (87%) Frame = -2
Query: 286 KVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIR 107 K L+HCLSS +RRWCT+EWFYSAID PWF ++EFVEYLNH +LGHVPRLTR EWGVIR Sbjct: 676 KDSLSHCLSSRLLRRWCTFEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIR 735
Query: 106 GSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 SLGKPRRLSK+FLQEER+KL YR+SVR+H Sbjct: 736 SSLGKPRRLSKQFLQEEREKLAQYRESVRQH 766
>tr|Q9LIF3|Q9LIF3_ARATH Genomic DNA, chromosome 3, P1 clone:MHC9 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1128
Score = 150 bits (378), Expect = 6e-35 Identities = 65/89 (73%), Positives = 76/89 (85%) Frame = -2
Query: 280 RLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIRGS 101 + +HC+SS + RRWC +EWFYSAID PWFAR EFVEYL+H LGHVPRLTR EWGVIR S Sbjct: 585 KFSHCISSFRARRWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSS 644
Query: 100 LGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 LGKPRR S++FL+EE++KL YRDSVRKH Sbjct: 645 LGKPRRFSEQFLKEEKEKLYLYRDSVRKH 673
>tr|Q6A332|Q6A332_ARATH Always early protein 3 OS=Arabidopsis thaliana GN=Ataly3 PE=2 SV=1 Length = 1132
Score = 150 bits (378), Expect = 6e-35 Identities = 65/89 (73%), Positives = 76/89 (85%) Frame = -2
Query: 280 RLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIRGS 101 + +HC+SS + RRWC +EWFYSAID PWFAR EFVEYL+H LGHVPRLTR EWGVIR S Sbjct: 589 KFSHCISSFRARRWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSS 648
Query: 100 LGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 LGKPRR S++FL+EE++KL YRDSVRKH Sbjct: 649 LGKPRRFSEQFLKEEKEKLYLYRDSVRKH 677
>tr|Q0WLW8|Q0WLW8_ARATH Putative uncharacterized protein At3g21430 (Fragment) OS=Arabidopsis thaliana GN=At3g21430 PE=2 SV=1 Length = 569
Score = 150 bits (378), Expect = 6e-35 Identities = 65/89 (73%), Positives = 76/89 (85%) Frame = -2
Query: 280 RLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIRGS 101 + +HC+SS + RRWC +EWFYSAID PWFAR EFVEYL+H LGHVPRLTR EWGVIR S Sbjct: 26 KFSHCISSFRARRWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSS 85
Query: 100 LGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 LGKPRR S++FL+EE++KL YRDSVRKH Sbjct: 86 LGKPRRFSEQFLKEEKEKLYLYRDSVRKH 114
>tr|A7NW60|A7NW60_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019794001 PE=4 SV=1 Length = 935
Score = 148 bits (374), Expect = 2e-34 Identities = 65/91 (71%), Positives = 77/91 (84%) Frame = -2
Query: 286 KVRLTHCLSSEKVRRWCTYEWFYSAIDLPWFARNEFVEYLNHARLGHVPRLTRAEWGVIR 107 K +L++CLS +VRRWC +EWFYSAID PWFA+ EFVEYL+H LGHVPRLTR EWGVIR Sbjct: 567 KEKLSNCLSCYRVRRWCAFEWFYSAIDYPWFAKKEFVEYLDHVGLGHVPRLTRVEWGVIR 626
Query: 106 GSLGKPRRLSKRFLQEERDKLEAYRDSVRKH 14 SLGKPRR S++FL+EE++KL YRDSVR H Sbjct: 627 SSLGKPRRFSEQFLKEEKEKLNQYRDSVRTH 657
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