NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914896
Clone id YMU001_000064_B04
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTCCACAAGGGCAACATTATGTTGTATTTCCTCCACTATCTTCTTCATTCCGCCTCTAC
CAAAGTTCAAGCGGAGCAGTTCCCATGTCGCCCTGAGATGAATCTTTTTGTCTTTCTAGA
AAACCACATTCTTCTTATAAGCTTCATCAAACTCATTACACTCTCTCACAAACTTGTGGT
CTTCACTATCGCACCACATGCATCGATCCAGATTTTTACGTGGTGGCTGCTGCTGCTGCT
TAGGTTCAGAAGTAGACGCCTTTGCAAATAACCCTTCAAATTTAACAGTTTTAAAATTCA
AATTTAGTTCTTGAATACCTTTAACGAGATCGTCAAGAACAGGCCCCTCCACTTTGGGTA
ATGTAGAGGGCGGCTTCTCTTTAATCTCTTCTTCATCATCATCCAGTACCTCGATCACGA
TTTGCTTATCAACCCGCTTCTGTCGTTTTACGATCATGTTCACTGCTTCAGATACTATTT
TCCAATCTGATGTCAATCCCAATTCTCCCGCCGGATCCTCCAATAATTGCACCAAATTCT
TTTGTAGTCGCGGATCAGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914896|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_B04.
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A9RR85
Definition tr|A9RR85|A9RR85_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 177
Score (bit) 109.0
E-value 9.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914896|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_B04.
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RR85|A9RR85_PHYPA Predicted protein OS=Physcomitrella paten...   109   9e-23
tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella paten...   107   3e-22
tr|A9T8Z8|A9T8Z8_PHYPA Predicted protein OS=Physcomitrella paten...   105   1e-21
tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella paten...   105   2e-21
tr|A9RX61|A9RX61_PHYPA Predicted protein OS=Physcomitrella paten...   105   2e-21
tr|A9TCS9|A9TCS9_PHYPA Predicted protein OS=Physcomitrella paten...   104   3e-21
tr|A9RIU4|A9RIU4_PHYPA Predicted protein OS=Physcomitrella paten...   104   3e-21
tr|A9U4X2|A9U4X2_PHYPA Predicted protein OS=Physcomitrella paten...   103   5e-21
tr|A9TRK6|A9TRK6_PHYPA Predicted protein OS=Physcomitrella paten...   103   5e-21
tr|A9STR6|A9STR6_PHYPA Predicted protein OS=Physcomitrella paten...   103   5e-21
tr|A9SQT0|A9SQT0_PHYPA Predicted protein OS=Physcomitrella paten...   103   5e-21
tr|A9RCF3|A9RCF3_PHYPA Predicted protein OS=Physcomitrella paten...   103   5e-21
tr|A9U620|A9U620_PHYPA Predicted protein OS=Physcomitrella paten...   103   6e-21
tr|A9U6K8|A9U6K8_PHYPA Predicted protein OS=Physcomitrella paten...   103   8e-21
tr|A9T3X3|A9T3X3_PHYPA Predicted protein OS=Physcomitrella paten...   103   8e-21
tr|A9SA67|A9SA67_PHYPA Predicted protein OS=Physcomitrella paten...   103   8e-21
tr|A9U5B5|A9U5B5_PHYPA Predicted protein OS=Physcomitrella paten...   102   1e-20
tr|A9TLL2|A9TLL2_PHYPA Predicted protein OS=Physcomitrella paten...   101   2e-20
tr|A9SML7|A9SML7_PHYPA Predicted protein OS=Physcomitrella paten...   101   2e-20
tr|A9S502|A9S502_PHYPA Predicted protein OS=Physcomitrella paten...   101   2e-20
tr|A9TMZ2|A9TMZ2_PHYPA Predicted protein OS=Physcomitrella paten...   100   4e-20
tr|A9RSS3|A9RSS3_PHYPA Predicted protein OS=Physcomitrella paten...   100   7e-20
tr|A9U6J4|A9U6J4_PHYPA Predicted protein (Fragment) OS=Physcomit...   100   9e-20
tr|A9SNT0|A9SNT0_PHYPA Predicted protein OS=Physcomitrella paten...   100   9e-20
tr|A9TU63|A9TU63_PHYPA Predicted protein OS=Physcomitrella paten...    99   2e-19
tr|A9RT98|A9RT98_PHYPA Predicted protein OS=Physcomitrella paten...    99   2e-19
tr|A9TBT0|A9TBT0_PHYPA Predicted protein OS=Physcomitrella paten...    99   2e-19
tr|A9RPI0|A9RPI0_PHYPA Predicted protein OS=Physcomitrella paten...    99   2e-19
tr|A9U1D2|A9U1D2_PHYPA Predicted protein OS=Physcomitrella paten...    98   3e-19
tr|A9SBL6|A9SBL6_PHYPA Predicted protein OS=Physcomitrella paten...    98   3e-19

>tr|A9RR85|A9RR85_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_69574 PE=4 SV=1
          Length = 762

 Score =  109 bits (273), Expect = 9e-23
 Identities = 60/177 (33%), Positives = 95/177 (53%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           AD  L+  L+  L D   E G T+DWK+V E V ++ ++QK   +               
Sbjct: 137 ADEHLEDKLLFYLADKTSESGFTNDWKLVKETVGLLARQQKIKTRGLLLRLEPMPASQNL 196

Query: 379 XKPPSTLPKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPPRKNLDRC 200
             P + +  V+   L+DL+KGIQ+L +    +K      K+  S   +  +  ++ ++RC
Sbjct: 197 MPPQNGIKTVKDGTLEDLIKGIQDLKVEMTELK------KSQMSSSSKTIEGSKRFIERC 250

Query: 199 MWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKKIVEE 29
           MWCD+  HK   EC+ +  A K  +V+ K+ +I LR + E L+ NFG+GGMKK+VEE
Sbjct: 251 MWCDNPYHKR-GECDSYKAAIKDGIVYFKEGRIRLRGSDEPLKTNFGKGGMKKLVEE 306


>tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_98120 PE=4 SV=1
          Length = 560

 Score =  107 bits (268), Expect = 3e-22
 Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           A  +LQ+ L  +LED   + GLT++W+ V +AV  + KR+KR D                
Sbjct: 182 AHGKLQEKLEFMLEDKEEDEGLTTNWERVDDAVRTMRKREKRKDMGGDQRPLQPSKIKVS 241

Query: 379 XKPPSTL-------PKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPP 221
              P+TL        K E   +D++++G+++L + F  ++ +G  ++ ST   KQ+ +P 
Sbjct: 242 SIHPTTLIQPSMATSKKEKTGIDEIIRGMRDLQIKFAKLEEKGQSSRIST---KQRPRPM 298

Query: 220 RKNLDRCMWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKK 41
              + RCMWCDS DH   +EC EF E  +K VVF KD  IH +   E L  NFG+GGMK 
Sbjct: 299 EGVVHRCMWCDSIDHSR-KECEEFIEKLRKRVVFFKDGMIHSKENGEKLETNFGKGGMKL 357

Query: 40  IV 35
            +
Sbjct: 358 FI 359


>tr|A9T8Z8|A9T8Z8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_89653 PE=4 SV=1
          Length = 504

 Score =  105 bits (263), Expect = 1e-21
 Identities = 59/176 (33%), Positives = 93/176 (52%)
 Frame = -1

Query: 556 DPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXXX 377
           D  L+  L+  L D   E G T+DWK+V E V ++ ++QK   +                
Sbjct: 110 DEHLEDKLLFYLADKTSESGFTNDWKLVKETVGLLARQQKIKTRGLLPRLEPMPASQNLM 169

Query: 376 KPPSTLPKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPPRKNLDRCM 197
            P + +  V+   L++L+KGIQ+L +    +K   + + + T E        +  ++RCM
Sbjct: 170 PPQNGIKTVKDGTLEELIKGIQDLKVEMTELKKSQMASSSKTIEGS------KGFIERCM 223

Query: 196 WCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKKIVEE 29
           WCD+ +HK   EC+ +  A K  +V+ KD KI L  + E L+ NFG+GGMKK+VEE
Sbjct: 224 WCDNPNHKR-GECDSYKAAIKDGIVYFKDGKIRLIGSDEPLKTNFGKGGMKKLVEE 278


>tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_90813 PE=4 SV=1
          Length = 423

 Score =  105 bits (261), Expect = 2e-21
 Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 7/182 (3%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           AD +LQ  L  +LED   + GLT++W+ V + V M+ KR+KR D                
Sbjct: 96  ADGKLQDKLEFMLEDKEEDEGLTTNWERVEDVVRMMTKREKRKDMGGDQRPLQPFKIKVS 155

Query: 379 XKPPSTL-------PKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPP 221
              P++L        K E   +D++++G+++L + F  ++ +G   + ST   KQ+ +  
Sbjct: 156 SIHPTSLIQPSIVTSKKEETGIDEIIRGMRDLQIKFAKLEEKGQSPRIST---KQKPRLM 212

Query: 220 RKNLDRCMWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKK 41
              + RCMWCD+ DH   REC EF EA  K VVF KD  +H +   E L  NFG+GGMK 
Sbjct: 213 EGVVHRCMWCDNIDHSR-RECEEFTEALCKGVVFFKDGMMHSKENGEKLETNFGKGGMKL 271

Query: 40  IV 35
            +
Sbjct: 272 FI 273


>tr|A9RX61|A9RX61_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_71711 PE=4 SV=1
          Length = 809

 Score =  105 bits (261), Expect = 2e-21
 Identities = 58/177 (32%), Positives = 94/177 (53%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           AD  L+  L+  L D   E G T+DWK+V E V ++ ++QK   +               
Sbjct: 85  ADEHLEDKLLFYLADKTSESGFTNDWKLVKETVGLLARQQKIKTRGLLPRLERMPASQNL 144

Query: 379 XKPPSTLPKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPPRKNLDRC 200
             P + +  V+   L+DL+KGI +L +    +K   + + + T E  ++       ++RC
Sbjct: 145 MPPQNGIKIVKDGTLEDLIKGIHDLKVEMTELKKSQMASSSKTIEGSKEF------IERC 198

Query: 199 MWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKKIVEE 29
           MWCD+ +HK   EC+ +  A K  +V+ K+ +I L  + E L+ NFG+GGMKK+VEE
Sbjct: 199 MWCDNPNHKR-GECDSYKAAIKDGIVYFKEGRIRLTRSDEPLKTNFGKGGMKKLVEE 254


>tr|A9TCS9|A9TCS9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_91078 PE=4 SV=1
          Length = 373

 Score =  104 bits (260), Expect = 3e-21
 Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           AD +LQ+ L  +LED   + GLT++W+ V +AV  + KR+KR D                
Sbjct: 100 ADGKLQEKLEFMLEDKEEDEGLTTNWERVEDAVRTMTKREKRKDMDGNQRPLQPSKIKVS 159

Query: 379 XKPPSTL-------PKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPP 221
              P++L        K E   +D++++G+++L + F  ++ +G  ++ S    KQ+ +P 
Sbjct: 160 SIHPTSLIQSSMATSKKEEIGIDEIIRGMRDLQIKFAKLEEKGQSSRISI---KQRPRPM 216

Query: 220 RKNLDRCMWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKK 41
              + RCMWCD+ DH   REC E  E  +K VVF KD  IH +   E L  NFG+GGMK 
Sbjct: 217 AGVVHRCMWCDNIDH-LRRECEECTEILRKGVVFFKDGLIHSKENGEKLETNFGKGGMKL 275

Query: 40  IV 35
            +
Sbjct: 276 FI 277


>tr|A9RIU4|A9RIU4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_66703 PE=4 SV=1
          Length = 814

 Score =  104 bits (260), Expect = 3e-21
 Identities = 68/180 (37%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
 Frame = -1

Query: 547 LQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXXXKPP 368
           LQ+ L  LLED   + GLT+DWK V EAV+++ KR+ R  K                 PP
Sbjct: 65  LQRELELLLEDNTRDNGLTTDWKKVFEAVDILAKREYRRGK--------VVVRQEIRPPP 116

Query: 367 STL-------PKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPPRKNL 209
           +T        P +    +D+LVKG+++L      +K   L  K S  E K   +P  + +
Sbjct: 117 TTTSCGQQPKPAIPKDAIDELVKGMKDLQ-----IKLAKLEEKESLLESKSVSKP--RYI 169

Query: 208 DRCMWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKKIVEE 29
            RC+WC S +H   REC +F +  ++ V+  KD KI LR T E L+ NFG+GGMKK+ EE
Sbjct: 170 QRCIWCYSMEHPR-RECGDFIDILREGVILWKDGKIALRDTSEFLKTNFGKGGMKKVFEE 228


>tr|A9U4X2|A9U4X2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_102185 PE=4 SV=1
          Length = 638

 Score =  103 bits (258), Expect = 5e-21
 Identities = 57/177 (32%), Positives = 94/177 (53%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           AD  L+  L+  L D   E G T+DWK+V E V ++ ++QK   +               
Sbjct: 116 ADEHLEDKLLFYLADKTSESGFTNDWKLVKETVGLLARQQKIKTRGLLPRLEPMPASQNL 175

Query: 379 XKPPSTLPKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPPRKNLDRC 200
             P + +  V+   L++L+KGIQ+L +    +K   + + + T E        +  ++RC
Sbjct: 176 MPPQNGIKTVKDGTLEELIKGIQDLKVEMTELKKSQMGSSSKTIEGS------KGFIERC 229

Query: 199 MWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKKIVEE 29
           MWCD+ +HK   EC+ +  A K  +V+ K+ +I +  + E L+ NFG+GGMKK+VEE
Sbjct: 230 MWCDNPNHKR-GECDSYKAAIKDGIVYFKEGRIRVTGSDEPLKTNFGKGGMKKLVEE 285


>tr|A9TRK6|A9TRK6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_96221 PE=4 SV=1
          Length = 690

 Score =  103 bits (258), Expect = 5e-21
 Identities = 58/177 (32%), Positives = 94/177 (53%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           AD  L+  L+  L D   E G T+DWK+V E V ++ ++QK   +               
Sbjct: 178 ADEHLEDKLLFYLADKTSESGFTNDWKLVKETVGLLARQQKIKTRGLLPRLEPMPASQNL 237

Query: 379 XKPPSTLPKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPPRKNLDRC 200
             P + +  V+   L++L+KGIQ+L +    +K   + + + T E        +  ++RC
Sbjct: 238 MPPQNGIKTVKDGTLEELIKGIQDLKVEMTELKKFHMASSSKTIEGS------KGFIERC 291

Query: 199 MWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKKIVEE 29
           MWCD+ +HK   EC+ +  A K  +V+ K+ +I L  + E L+ NFG+GGMKK+VEE
Sbjct: 292 MWCDNPNHKR-GECDSYKAAIKDGIVYFKEDRIRLIGSDEPLKTNFGKGGMKKLVEE 347


>tr|A9STR6|A9STR6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_83884 PE=4 SV=1
          Length = 296

 Score =  103 bits (258), Expect = 5e-21
 Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 7/182 (3%)
 Frame = -1

Query: 559 ADPRLQKNLVQLLEDPAGELGLTSDWKIVSEAVNMIVKRQKRVDKQXXXXXXXXXXXXXX 380
           A+ +LQ+NL  +LED   + GLT++WK V E V    KR++R D +              
Sbjct: 23  ANGKLQENLEIMLEDKEKDEGLTTNWKRVEEVVRSFTKRERRKDMRGDQRLSQASKIKIS 82

Query: 379 XKPPSTL-------PKVEGPVLDDLVKGIQELNLNFKTVKFEGLFAKASTSEPKQQQQPP 221
              P++L        K E   +D+++ G+++L + F  ++ +   ++ ST   KQ+  P 
Sbjct: 83  SIYPTSLIQPSMATSKKEEMEIDEIIHGMRDLQIKFAKLEEKDQSSRIST---KQRPGPI 139

Query: 220 RKNLDRCMWCDSEDHKFVRECNEFDEAYKKNVVF*KDKKIHLRATWELLRLNFGRGGMKK 41
              + RCMWCDS DH   +EC +F EA +K V F KD  IH + + E L  NF +GGMK 
Sbjct: 140 EGVIHRCMWCDSIDHS-KKECKDFTEALRKGVFFFKDGMIHSKESGEKLETNFSKGGMKL 198

Query: 40  IV 35
            +
Sbjct: 199 FI 200