BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914905|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C02.
         (395 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7TE77|MRH4_VANPO ATP-dependent RNA helicase MRH4, mitochondr...    31   1.7  
sp|Q12TN0|GLMM_METBU Probable phosphoglucosamine mutase OS=Metha...    31   1.7  
sp|Q54GU0|ARSB_DICDI Putative transporter arsB OS=Dictyostelium ...    30   2.9  
sp|O83174|Y138_TREPA Uncharacterized protein TP_0138 OS=Treponem...    30   3.7  
sp|Q4P6G4|EIF3B_USTMA Eukaryotic translation initiation factor 3...    29   8.3  

>sp|A7TE77|MRH4_VANPO ATP-dependent RNA helicase MRH4, mitochondrial
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=MRH4 PE=3 SV=1
          Length = 539

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
 Frame = +1

Query: 37  VTRSTERDVPYVVRKL------PCM*ITLNQSPQGRDPIVEDYLPPRPSPTTW---NPKL 189
           V  + ++DVPY+V KL       C+ +T N S + R   + D++ P P P T     PK+
Sbjct: 373 VFTNEKKDVPYIVEKLKVTYGHDCIGLTSNDSVEERLEKIHDFITP-PKPITMKKETPKI 431

Query: 190 D 192
           +
Sbjct: 432 E 432


>sp|Q12TN0|GLMM_METBU Probable phosphoglucosamine mutase
           OS=Methanococcoides burtonii (strain DSM 6242) GN=glmM
           PE=3 SV=1
          Length = 433

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 64  PYVVRKLPCM*ITLNQSPQGRDPIVEDYLPPR-PSPTTWN 180
           PYV+RK+ C  ITLN  P G       Y P R P P   N
Sbjct: 177 PYVLRKMGCEVITLNSQPDG-------YFPARNPEPNDTN 209


>sp|Q54GU0|ARSB_DICDI Putative transporter arsB OS=Dictyostelium
           discoideum GN=arsB PE=2 SV=1
          Length = 563

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 314 CSIRNKKRKRKNAVIEQVFAHKERKVKRECDLEKLI 207
           CSI NK +K+K   IE  F  KE+ ++   ++ KLI
Sbjct: 334 CSIINKDKKKKENFIEIYFNSKEKSIETIVNIIKLI 369


>sp|O83174|Y138_TREPA Uncharacterized protein TP_0138 OS=Treponema
           pallidum GN=TP_0138 PE=4 SV=1
          Length = 245

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 24  NGTVRDPQYGTRRSVRRTKTTLHVDHVKP 110
           NGT+ D   G R+ V+R   TL ++H+ P
Sbjct: 161 NGTILDMTKGARKRVQRADKTLTIEHIFP 189


>sp|Q4P6G4|EIF3B_USTMA Eukaryotic translation initiation factor 3
           subunit B OS=Ustilago maydis GN=PRT1 PE=3 SV=1
          Length = 745

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 3   PYGTYQTNGTVRDPQYGTRRSVRRTKTTLHVDHVKPK 113
           P+GT+    +  DPQ GT  S    KT L+  H+ PK
Sbjct: 475 PFGTHFALISSNDPQLGTPASGITIKTQLNFYHLHPK 511

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914905|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C02.
         (395 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LKL1|B8LKL1_PICSI Putative uncharacterized protein OS=Picea...    34   4.1  

>tr|B8LKL1|B8LKL1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 730

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -1

Query: 335 CKRYG*WCSIRNKKRKRKNAVIEQVFAHKERKVKRECDLEK 213
           C  YG WC+ +N+ + R  A I++    +++K   E ++ K
Sbjct: 42  CSEYGSWCTFKNRIQSRSGAFIQRTKPKQQQKADHESEVAK 82