BP914909
Clone id YMU001_000064_C06
Library
Length 590
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGTACATCAAAACAATCGGCCAGAGCTGTCACATACCATACTTAGACTAAATCAGCCAA
GGACAACTCAAGACCTGATGTCAGTTTTGGATCGGTAACCGAGCACAGCCATGCCAAGAC
TCCAATACACATTTTCCCATAAATCACCTTCTTAACACATTTGCTTATAATTTTCACAAA
AAAATAACCAAAAACAGTTCCAAGACAATTGTCCCCAATCCATAGTTAACACACGGTATA
CTGGATATGAGACCAGAGAACCAACGTGAGATTCTAAATCTATTTATAAACAATGAGAAT
TCATAATGTACATCAACCAGGTGGGTGCCAAGGCAGATGTCCCCACAAGCGGGTCCGCCA
TTATCCTCAGGCCGAGGTAATGAACCCGAGCCAAGTAACCTCTAATCATGCTTACTTTCC
AATATATTTTCAGAGGGTATTCCTGCTATAGACAACATTGAGTAAGTAAGAATAGTCCAT
TTAAGGGACCAGCTAACCTCCTCAACTTAAACAGATCATGCAACAGTAAACTACATAACA
GAACTAGCATCTACCAAATATGAAGTATATCTTATGACTAGCTGATCAGA
■■Homology search results ■■ -
sp_hit_id Q9SUQ3
Definition sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana
Align length 82
Score (bit) 31.6
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914909|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C06.
(573 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g2374... 32 2.9

>sp|Q9SUQ3|Y4374_ARATH Probable inactive receptor kinase At4g23740
OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1
Length = 638

Score = 31.6 bits (70), Expect = 2.9
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Frame = +2

Query: 218 GILDMRPENQREIL-------NLFINNENS*CTSTRWVPRQMSPQAGPPLSSGRG-NEPE 373
GI + EN +++ N+F+N+E++ C S + MSP A PP+S G PE
Sbjct: 447 GIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMSPLA-PPISRQAGYRAPE 505

Query: 374 PSNL-*SCLLSNIFSEGIPAID 436
++ S LS+++S G+ ++
Sbjct: 506 VTDTRKSSQLSDVYSFGVVLLE 527


tr_hit_id A3JWR5
Definition tr|A3JWR5|A3JWR5_9RHOB Binding-protein-dependent transport systems inner membrane component OS=Rhodobacterales bacterium HTCC2150
Align length 36
Score (bit) 37.0
E-value 0.78
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914909|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C06.
(573 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3JWR5|A3JWR5_9RHOB Binding-protein-dependent transport syste... 37 0.78
tr|A0CJP3|A0CJP3_PARTE Chromosome undetermined scaffold_2, whole... 34 6.6
tr|B2WS70|B2WS70_ARAHA Leucine-rich repeat transmembrane protein... 33 8.6

>tr|A3JWR5|A3JWR5_9RHOB Binding-protein-dependent transport systems
inner membrane component OS=Rhodobacterales bacterium
HTCC2150 GN=RB2150_15500 PE=3 SV=1
Length = 444

Score = 37.0 bits (84), Expect = 0.78
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2

Query: 185 WNCFWLFFCENYKQMC*EGDLWENVYWSLGMAVLGY 78
WN FW + Y+ + LWENV+WSL V+G+
Sbjct: 230 WNTFWQLNRDGYQGV----GLWENVFWSLARVVIGF 261


>tr|A0CJP3|A0CJP3_PARTE Chromosome undetermined scaffold_2, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00000722001 PE=4 SV=1
Length = 2403

Score = 33.9 bits (76), Expect = 6.6
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +2

Query: 98 QDSNTHFPINHLLNTFAYNFHKKITKNSSKTIVPNP*LTHGILDM------RPENQREIL 259
Q+++ F +N L N Y K S + V N +T GILD+ +P NQR++L
Sbjct: 314 QETSIGFGVNKLYNLLFYQGFSKTPVCSLSSNVWNH-VTVGILDISINDDFKPLNQRKLL 372

Query: 260 NLFINNENS*CTSTRWVPRQMSPQAGPPLSSGRGNE 367
+FI N T V GP +G+E
Sbjct: 373 RIFIGNVERNLTIITNVKPYQKLVLGPVFMDDQGSE 408


>tr|B2WS70|B2WS70_ARAHA Leucine-rich repeat transmembrane protein
kinase OS=Arabidopsis halleri GN=8F2.11 PE=4 SV=1
Length = 636

Score = 33.5 bits (75), Expect = 8.6
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Frame = +2

Query: 218 GILDMRPENQREIL-------NLFINNENS*CTSTRWVPRQMSPQAGPPLSSGRG-NEPE 373
GI + EN +++ N+F+N+EN+ C S + MSP A PP+S G PE
Sbjct: 444 GIARIHKENNGKLVHGNIKSSNIFLNSENNGCVSDLGLTAVMSPLA-PPISRQAGYRAPE 502

Query: 374 PSNL-*SCLLSNIFSEGIPAID 436
++ S LS+++S G+ ++
Sbjct: 503 VTDTRKSSQLSDVYSFGVVLLE 524