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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914911
Clone id YMU001_000064_C08
Library
Length 326
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTTCAATAAAAGTGGCTCAATCTTGTTTCGCAATTCATTTGAACTTTCTTTTAACTCTGT
GAGTAGCCCCACTAATTCGGGTGCGTCACTCATGACAACATTCATTTGTTCTTCTTTTGA
TAATAGCGCTCACATCTTTCTTCACTTCTTCAACAAGTATACTTGCATCTTTGGCCGATA
CATCCAAACGCCCTCTTTTTGATAAGTAACTCTTACTTCGCTGATTCTCTTTTGCTTCTG
CCTTTGCAACAACATCCTGCAACGAACTTTCATACTCCTTTGCCGAATTCTCTTCTTCAT
CTACGTCCAAATCAAAATCCTCAGGA
■■Homology search results ■■ -
sp_hit_id Q55GC2
Definition sp|Q55GC2|DST2_DICDI Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum
Align length 94
Score (bit) 38.1
E-value 0.014
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914911|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C08.
         (326 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55GC2|DST2_DICDI Serine/threonine-protein kinase dst2 OS=Dic...    38   0.014
sp|Q74Z27|INO80_ASHGO Putative DNA helicase INO80 OS=Ashbya goss...    34   0.20 
sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-7...    33   0.45 
sp|Q9NQZ2|SAS10_HUMAN Something about silencing protein 10 OS=Ho...    32   0.77 
sp|P12845|MYO2_CAEEL Myosin-2 OS=Caenorhabditis elegans GN=myo-2...    32   0.77 
sp|Q6AXX4|SAS10_RAT Something about silencing protein 10 OS=Ratt...    32   1.3  
sp|P48608|DIA_DROME Protein diaphanous OS=Drosophila melanogaste...    32   1.3  
sp|Q58120|Y710_METJA UPF0020 protein MJ0710 OS=Methanocaldococcu...    31   1.7  
sp|Q9JI13|SAS10_MOUSE Something about silencing protein 10 OS=Mu...    31   1.7  
sp|Q9GL73|RNZ2_GORGO Zinc phosphodiesterase ELAC protein 2 OS=Go...    31   1.7  
sp|Q9Z882|PMP16_CHLPN Probable outer membrane protein pmp16 OS=C...    31   1.7  
sp|A6L792|XYLA_BACV8 Xylose isomerase OS=Bacteroides vulgatus (s...    31   2.2  
sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE...    31   2.2  
sp|P31631|SSA1_PASHA Serotype-specific antigen 1 OS=Pasteurella ...    30   2.9  
sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=...    30   3.8  
sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Gui...    30   3.8  
sp|Q27389|RL13A_CAEEL 60S ribosomal protein L13a OS=Caenorhabdit...    30   5.0  
sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus...    30   5.0  
sp|A4WEY3|IF2_ENT38 Translation initiation factor IF-2 OS=Entero...    30   5.0  
sp|Q7A1V2|ESSB_STAAW Protein essB OS=Staphylococcus aureus (stra...    30   5.0  
sp|P0C053|ESSB_STAAU Protein essB OS=Staphylococcus aureus GN=es...    30   5.0  
sp|Q6GCI6|ESSB_STAAS Protein essB OS=Staphylococcus aureus (stra...    30   5.0  
sp|Q6GK25|ESSB_STAAR Protein essB OS=Staphylococcus aureus (stra...    30   5.0  
sp|Q7A7S0|ESSB_STAAN Protein essB OS=Staphylococcus aureus (stra...    30   5.0  
sp|Q99WU0|ESSB_STAAM Protein essB OS=Staphylococcus aureus (stra...    30   5.0  
sp|Q5HJ87|ESSB_STAAC Protein essB OS=Staphylococcus aureus (stra...    30   5.0  
sp|Q5ACM9|EIF3J_CANAL Eukaryotic translation initiation factor 3...    30   5.0  
sp|Q6P0R8|SHOT1_DANRE Shootin-1 OS=Danio rerio PE=2 SV=2               29   6.5  
sp|O93383|NRG1_XENLA Pro-neuregulin-1, membrane-bound isoform OS...    29   6.5  
sp|O35368|IFI3_MOUSE Interferon-activable protein 203 OS=Mus mus...    29   6.5  

>sp|Q55GC2|DST2_DICDI Serine/threonine-protein kinase dst2
           OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1
          Length = 1142

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = -2

Query: 301 DEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDVSAK-DASILVEEVKKDVSA 125
           +EEE   K+ +    D++ +  AK  Q+ K   +K  ++    K +   L  + K D   
Sbjct: 523 EEEEQLLKQQQKEKDDLLKQNAAKATQQQKQSAAKEEKIQKQHKVEKETLSRQQKADREQ 582

Query: 124 IIKRRTNECCHE*RTRISGATHRVKRKFK*IAKQ 23
           ++K+  ++C  + RT+++    + +R+FK   KQ
Sbjct: 583 LLKKNQSDCSKQ-RTKVTDQQKQQQREFKDQQKQ 615


>sp|Q74Z27|INO80_ASHGO Putative DNA helicase INO80 OS=Ashbya
           gossypii GN=INO80 PE=3 SV=1
          Length = 1414

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -2

Query: 322 EDFDLDVDEEENSAKEYESS-----LQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASI 158
           ED D D DEEE   +E E       L D   K  + E  RSKS +    +LD+++  A I
Sbjct: 206 EDEDEDEDEEEEEEEELEELEDIQLLDDDNDKDFSPEGGRSKSSIKLNTKLDINSDIALI 265

Query: 157 ---LVEEVKKDVSAIIKRRTNECC 95
              L++  +K  SA  K+R    C
Sbjct: 266 QRELLKMAQKHKSAKAKKRKFTSC 289


>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75
            PE=2 SV=3
          Length = 1938

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = -2

Query: 298  EEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASILVEEVKKDVSAII 119
            E+E  AK+YE  + ++  K + +  Q  + Y S +GRL     D +  VEE++  ++ I 
Sbjct: 1251 EQERLAKQYEIQVAELQQKVDEQSRQIGE-YTSTKGRLSNDNSDLARQVEELEIHLATIN 1309

Query: 118  KRRT 107
            + +T
Sbjct: 1310 RAKT 1313


>sp|Q9NQZ2|SAS10_HUMAN Something about silencing protein 10 OS=Homo
           sapiens GN=UTP3 PE=1 SV=1
          Length = 479

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 12/36 (33%), Positives = 27/36 (75%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLL 7
           +E++ ++  ++PEL+ L+ +LK    E+++++EPLL
Sbjct: 213 KEKLKMLRKESPELLELIEDLKVKLTEVKDELEPLL 248


>sp|P12845|MYO2_CAEEL Myosin-2 OS=Caenorhabditis elegans GN=myo-2 PE=2
            SV=2
          Length = 1947

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 17/58 (29%), Positives = 36/58 (62%)
 Frame = -2

Query: 298  EEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASILVEEVKKDVSA 125
            ++E  AK YE  L ++  KA+ +++++ + ++S +GRL+    D +  VEE++  + A
Sbjct: 1260 DQERIAKGYEVRLLELRLKAD-EQSRQLQDFVSSKGRLNSENSDLARQVEELEAKIQA 1316


>sp|Q6AXX4|SAS10_RAT Something about silencing protein 10 OS=Rattus
           norvegicus GN=Utp3 PE=2 SV=1
          Length = 470

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 11/36 (30%), Positives = 27/36 (75%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLL 7
           +E++ ++  ++PEL+ L+ +LK    E+++++EPL+
Sbjct: 209 KEKLKMLRKESPELLELIEDLKVKLTEVKDELEPLI 244


>sp|P48608|DIA_DROME Protein diaphanous OS=Drosophila melanogaster
           GN=dia PE=1 SV=2
          Length = 1091

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 262 LQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASILVEEVKKDV 131
           L D+V KA+AKE++RS+ Y  K  +L+ + ++A      +++ V
Sbjct: 447 LDDIVEKAKAKESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKV 490


>sp|Q58120|Y710_METJA UPF0020 protein MJ0710 OS=Methanocaldococcus
           jannaschii GN=MJ0710 PE=3 SV=1
          Length = 351

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = -2

Query: 304 VDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASILVEEVKKDVSA 125
           VD  +    ++ +S +D VA  +  +   SKSY  +  +L       SI    ++K++  
Sbjct: 72  VDLVDKIVNDFINSFKDFVANIDYPDIDESKSYAVRVLKLHKDEFTKSIDSLRIEKEIGG 131

Query: 124 IIKRRTN 104
           IIK +TN
Sbjct: 132 IIKLKTN 138


>sp|Q9JI13|SAS10_MOUSE Something about silencing protein 10 OS=Mus
           musculus GN=Utp3 PE=1 SV=1
          Length = 469

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 11/36 (30%), Positives = 27/36 (75%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLL 7
           +E++ ++  ++PEL+ L+ +L+    E+++++EPLL
Sbjct: 209 KEKLKMLKKESPELLELIEDLQAKLTEVKDELEPLL 244


>sp|Q9GL73|RNZ2_GORGO Zinc phosphodiesterase ELAC protein 2
           OS=Gorilla gorilla gorilla GN=ELAC2 PE=2 SV=1
          Length = 826

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = -2

Query: 325 PEDF---DLDVDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASIL 155
           PE+F    L +   + S +EY  S+QDV A AE +       +L     + +  ++ S  
Sbjct: 443 PEEFIVEALQLPNFQQSVQEYRRSVQDVPAPAEKRSQYPEIIFLGTGSAIPMKIRNVSAT 502

Query: 154 VEEVKKDVSAII 119
           +  +  D S ++
Sbjct: 503 LVNISPDTSLLL 514
tr_hit_id A9RZ66
Definition tr|A9RZ66|A9RZ66_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 38
Score (bit) 55.8
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914911|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C08.
         (326 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RZ66|A9RZ66_PHYPA Predicted protein OS=Physcomitrella paten...    56   1e-06
tr|A7QAR6|A7QAR6_VITVI Chromosome chr5 scaffold_72, whole genome...    49   2e-06
tr|Q8L3P4|Q8L3P4_ARATH Putative uncharacterized protein At2g4365...    47   5e-04
tr|Q0WVP9|Q0WVP9_ARATH Putative uncharacterized protein At2g4365...    47   5e-04
tr|O22838|O22838_ARATH Putative uncharacterized protein At2g4365...    47   5e-04
tr|A9RBW0|A9RBW0_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.034
tr|A8J0A9|A8J0A9_CHLRE Predicted protein (Fragment) OS=Chlamydom...    39   0.17 
tr|Q6L3H1|Q6L3H1_SOLDE Leucine zipper protein, putative OS=Solan...    38   0.28 
tr|Q6L3T5|Q6L3T5_SOLDE Putative Sas10/Utp3 family protein, ident...    37   0.37 
tr|Q657Z6|Q657Z6_ORYSJ cDNA clone:J013109E04, full insert sequen...    37   0.63 
tr|B8ACS9|B8ACS9_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.63 
tr|A2ZNB2|A2ZNB2_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.63 
tr|Q8I492|Q8I492_PLAF7 Mature parasite-infected erythrocyte surf...    36   1.1  
tr|Q86BT4|Q86BT4_PLAFA Phoshoprotein 300 (Fragment) OS=Plasmodiu...    36   1.1  
tr|Q25920|Q25920_PLAFA Mature-parasite-infected erythrocyte surf...    36   1.1  
tr|Q06166|Q06166_PLAFA Mature parasite-infected erythrocyte surf...    36   1.1  
tr|Q06165|Q06165_PLAFA PfEMP2 (Fragment) OS=Plasmodium falciparu...    36   1.1  
tr|Q6NFX9|Q6NFX9_CORDI Putative DNA methyltransferase OS=Coryneb...    35   1.8  
tr|B5Y7X7|B5Y7X7_COPPD Probable DNA double-strand break repair R...    35   2.4  
tr|A9PBD4|A9PBD4_POPTR Putative uncharacterized protein OS=Popul...    35   2.4  
tr|Q4T074|Q4T074_TETNG Chromosome 3 SCAF11313, whole genome shot...    34   3.2  
tr|A6NYZ6|A6NYZ6_9BACE Putative uncharacterized protein OS=Bacte...    34   3.2  
tr|Q10MN1|Q10MN1_ORYSJ Os03g0302200 protein OS=Oryza sativa subs...    34   3.2  
tr|A2XFQ9|A2XFQ9_ORYSI Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|B4GG93|B4GG93_DROPE GL17181 OS=Drosophila persimilis GN=GL171...    34   3.2  
tr|Q23DB4|Q23DB4_TETTH Putative uncharacterized protein OS=Tetra...    34   4.1  
tr|A2EXX1|A2EXX1_TRIVA Putative uncharacterized protein OS=Trich...    34   4.1  
tr|A3LNK1|A3LNK1_PICST Predicted protein OS=Pichia stipitis GN=P...    34   4.1  
tr|B0SLC4|B0SLC4_LEPBP ATP synthase B chain OS=Leptospira biflex...    33   5.4  
tr|B0SDA1|B0SDA1_LEPBA ATP synthase B chain OS=Leptospira biflex...    33   5.4  

>tr|A9RZ66|A9RZ66_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_161921 PE=4 SV=1
          Length = 625

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1
           EEQM V+MSDAPELVGL TEL+++ NELR K+ PLL K
Sbjct: 192 EEQMEVLMSDAPELVGLTTELQDNLNELRTKVAPLLEK 229


>tr|A7QAR6|A7QAR6_VITVI Chromosome chr5 scaffold_72, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034656001
           PE=4 SV=1
          Length = 624

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1
           EEQM+VV S APELVGLL+EL ++  +L  K+ PLL K
Sbjct: 174 EEQMDVVYSSAPELVGLLSELNDALEQLEGKVNPLLAK 211



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 15/66 (22%), Positives = 31/66 (46%)
 Frame = -2

Query: 313 DLDVDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDVSAKDASILVEEVKKD 134
           D  +++      + E ++++++ K +      SKS   +  +      D     EEVKKD
Sbjct: 117 DFGIEDANQDESDGEPTMEEIMVKGKTT----SKSLADEEAK-----DDTGTAYEEVKKD 167

Query: 133 VSAIIK 116
           ++A+ K
Sbjct: 168 LNALSK 173


>tr|Q8L3P4|Q8L3P4_ARATH Putative uncharacterized protein At2g43650
           OS=Arabidopsis thaliana GN=At2g43650 PE=2 SV=1
          Length = 654

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1
           EEQM+VV S APE+VGLL+EL ++  EL +KI P++ K
Sbjct: 226 EEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNK 263


>tr|Q0WVP9|Q0WVP9_ARATH Putative uncharacterized protein At2g43650
           (Fragment) OS=Arabidopsis thaliana GN=At2g43650 PE=2
           SV=1
          Length = 383

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1
           EEQM+VV S APE+VGLL+EL ++  EL +KI P++ K
Sbjct: 226 EEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNK 263


>tr|O22838|O22838_ARATH Putative uncharacterized protein At2g43650
           OS=Arabidopsis thaliana GN=At2g43650 PE=4 SV=1
          Length = 520

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1
           EEQM+VV S APE+VGLL+EL ++  EL +KI P++ K
Sbjct: 226 EEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNK 263


>tr|A9RBW0|A9RBW0_PHYPA Predicted protein OS=Physcomitrella patens
          subsp. patens GN=PHYPADRAFT_64041 PE=4 SV=1
          Length = 316

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -3

Query: 90 SDAPELVGLLTELKESSNELRNKIEPLLLK 1
          +DAPELVGL TEL+++  ELR K+ PLL K
Sbjct: 6  NDAPELVGLTTELQDNLKELRTKVAPLLEK 35


>tr|A8J0A9|A8J0A9_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_148919 PE=4
           SV=1
          Length = 341

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/36 (41%), Positives = 28/36 (77%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNELRNKIEPLL 7
           E ++  +++DAPEL+ LL +L++S  E+R+++ PLL
Sbjct: 255 EARLQALLADAPELLSLLRDLQDSLGEVRHRVSPLL 290


>tr|Q6L3H1|Q6L3H1_SOLDE Leucine zipper protein, putative OS=Solanum
           demissum GN=SDM1_4t00012 PE=4 SV=2
          Length = 458

 Score = 37.7 bits (86), Expect = 0.28
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -3

Query: 90  SDAPELVGLLTELKESSNELRNKIEPLLLK 1
           S APELVGLL+EL ES   L NK+ PL  K
Sbjct: 361 SSAPELVGLLSELGESLEHLDNKVNPLFNK 390


>tr|Q6L3T5|Q6L3T5_SOLDE Putative Sas10/Utp3 family protein,
           identical OS=Solanum demissum GN=SDM1_40t00002 PE=4 SV=1
          Length = 746

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 90  SDAPELVGLLTELKESSNELRNKIEPLLLK 1
           S APELVGLL+EL E+  +L NK+ PL  K
Sbjct: 272 SSAPELVGLLSELGEALEQLDNKVNPLFNK 301


>tr|Q657Z6|Q657Z6_ORYSJ cDNA clone:J013109E04, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0005A05.2 PE=2 SV=1
          Length = 645

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -3

Query: 114 EEQMNVVMSDAPELVGLLTELKESSNEL 31
           +E+M V+ S APELVGLL+ELK++  EL
Sbjct: 212 DEKMGVLDSSAPELVGLLSELKDAHEEL 239