BP914912
Clone id YMU001_000064_C09
Library
Length 431
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGGTCCACATAGGCGATTCTGTGACTGGGCAGGAACTGATTCACTTTTGCAGTGAGGATG
CCATGGGAAGAGGTGTGGAAACCTCCAAATAAAGTGATGCAGTTTGTGTGGTACACTGAA
TCTCACTTGCATGATTTGTTATTTGAACCTATGATTGCAGTGAATGATCCATGGATTGCA
TCATTGAGGCAGGCTATAATTAATATGGTGATTCATTTGAATATTCTGTAGAGAGCTTGA
TGATTTAATGGGCCTTGGGGCCTTATGACAAACTTAAAGCTAGTCAAGTCCCTAAATGGA
GTTCAGCAGGCAAAGTTTATTTGGCCACGGAATATGTCATGTAGAGCATTATCGGATGGG
AGGACTGTTGAGTCTTGGCTAAATTAGGTTGGAGTCCCCATGCAAGGCATTTGAAGACAT
GGTTGAAACCC
■■Homology search results ■■ -
sp_hit_id P38738
Definition sp|P38738|YHC9_YEAST Uncharacterized protein YHL029C OS=Saccharomyces cerevisiae
Align length 82
Score (bit) 32.3
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914912|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C09.
(416 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P38738|YHC9_YEAST Uncharacterized protein YHL029C OS=Saccharo... 32 0.76
sp|O13670|MTO1_SCHPO Protein MTO1 homolog, mitochondrial OS=Schi... 30 4.9
sp|Q21432|NAS11_CAEEL Zinc metalloproteinase nas-11 OS=Caenorhab... 29 6.4

>sp|P38738|YHC9_YEAST Uncharacterized protein YHL029C
OS=Saccharomyces cerevisiae GN=YHL029C PE=1 SV=1
Length = 679

Score = 32.3 bits (72), Expect = 0.76
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = -3

Query: 267 HKAPRPIKSSSSLQNIQMNHHINYSLPQ*CNPWIIHCNHRFK*QIMQVRFSVPHKLHHFI 88
H P+ +S L+N++ N +L + ++ CN + + VP +L H +
Sbjct: 2 HDKKSPMANSHYLKNLKQQFR-NKNLIE-TTIHLVKCNDHDSLAFLARTYGVPPQLRHVV 59

Query: 87 WRFPHLFPWHPHCKSESVPAQS 22
W P L +HP C S ++ + +
Sbjct: 60 W--PILLKYHPMCISPNITSNT 79


>sp|O13670|MTO1_SCHPO Protein MTO1 homolog, mitochondrial
OS=Schizosaccharomyces pombe GN=mto1 PE=1 SV=1
Length = 666

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = -3

Query: 111 PHKLHHFIWRFPH-LFP---WHPHCKSESVPAQSQNRL 10
PHK H IW P L P W+P+ S S+P + Q+ +
Sbjct: 305 PHKARHLIWLEPEGLDPNSWWYPNGLSNSMPEEIQHNI 342


>sp|Q21432|NAS11_CAEEL Zinc metalloproteinase nas-11
OS=Caenorhabditis elegans GN=nas-11 PE=1 SV=2
Length = 579

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Frame = -3

Query: 120 FSVPHKLHHFIWR---------FPHLFPWHPHCKSESVPAQSQ 19
F HK H + R F H FP HP+C+ VP Q +
Sbjct: 94 FKDVHKKHRHLGRKEWKGKVKQFCHRFPGHPNCRRGKVPDQKE 136


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914912|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C09.
(416 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******