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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914913
Clone id YMU001_000064_C11
Library
Length 640
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGAGACCTGGGCCTGTCCTCCGTCAAAGAATTGCTGATGTAATGAACGGGAAGGCGGAG
GGGCAAGATCCCCCGGAGGAAGATGAAGAAAGCTCTCATTTGGGGAGGCACACGTCTGCG
AGCAAGCGAAAGGTTCTTAGTGGCATGTATGAAACAAATACTGCTGGAGTTGGAGTGCAA
CAGCTGGAATGGATCCATCGTGAAACTGGAGGAGATAGGATATTCATAAGGAGTCCTGAA
ATTAAATGGAAGCCCGCAAGTTGGCTTCTGTTTAATGTGTGGCTACCTTGTCACACATAC
ACATATATATATTGTAGTCCTAATAGCTTGTTTCTTTTGAGTTTGGCCTTTCTTCTGCAT
AGGAGTCGAATCATATCCTTCAGTTTTGGCACATCGTGACCTTCGTGATGCTCTGAAAGC
ATTGCTCATGTCATGGTGTTTCTATTTCTACCCTGTACCTACTGTAAGTTGAGCGTGAAG
GCGTCTCCCGGACTGTAATGTCTTGTAGGTGAGAAGAGTTCATTGACAAAAGCTCAAATG
AAGATGATGTTGAGAAAGACACTGCATCGAATCAGTGCTGCACAACTGCCCATTACTGCT
GTATATGTACATCTATCCAAGAAGACCAAATCTGTTTCAG
■■Homology search results ■■ -
sp_hit_id Q54H45
Definition sp|Q54H45|DRKB_DICDI Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum
Align length 48
Score (bit) 30.4
E-value 8.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914913|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C11.
         (640 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54H45|DRKB_DICDI Probable serine/threonine-protein kinase dr...    30   8.1  
sp|O35973|PER1_MOUSE Period circadian protein homolog 1 OS=Mus m...    30   8.1  
sp|Q4FMI9|AZOR_PELUB FMN-dependent NADH-azoreductase OS=Pelagiba...    30   8.1  

>sp|Q54H45|DRKB_DICDI Probable serine/threonine-protein kinase drkB
           OS=Dictyostelium discoideum GN=drkB PE=3 SV=1
          Length = 690

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 284 SHTLNRSQLAGFHLISGLLMNILSPPVSRWIHSSCCTPTPAVFVSYMP 141
           +H +N + L  FH    L+ N+  P V +++ S   +P   +   YMP
Sbjct: 422 AHNINENILKEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMP 469


>sp|O35973|PER1_MOUSE Period circadian protein homolog 1 OS=Mus
            musculus GN=Per1 PE=1 SV=1
          Length = 1291

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -1

Query: 187  PAVALQLQQYLFHTCH*EPFACSQT-CASPNESFLHLPPGDLAPPPSRSLHQ 35
            P VAL L  YLF T    P+  SQ     P     H P   L PPP    H+
Sbjct: 916  PMVALVLPNYLFPTPPSYPYGVSQAPVEGPPTPASHSPSPSLPPPPLSPPHR 967


>sp|Q4FMI9|AZOR_PELUB FMN-dependent NADH-azoreductase
           OS=Pelagibacter ubique GN=azoR PE=3 SV=1
          Length = 193

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 50  GRRRGKIPRRKMKKALIWGGTRLRASERFLVACMKQIL 163
           GRR G +  ++    +  GGT+L +SE FL   +K IL
Sbjct: 121 GRREGLLKNKQAYLVITSGGTKLNSSEDFLTPWLKFIL 158
tr_hit_id A9NNU4
Definition tr|A9NNU4|A9NNU4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 91
Score (bit) 68.9
E-value 2.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914913|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_C11.
         (640 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NNU4|A9NNU4_PICSI Putative uncharacterized protein OS=Picea...    69   2e-10
tr|B6T6G7|B6T6G7_MAIZE Putative uncharacterized protein OS=Zea m...    57   1e-06
tr|Q53K52|Q53K52_ORYSJ cDNA clone:J013099D01, full insert sequen...    53   1e-05
tr|A9TKW7|A9TKW7_PHYPA Predicted protein OS=Physcomitrella paten...    53   1e-05
tr|B8B4D8|B8B4D8_ORYSI Putative uncharacterized protein OS=Oryza...    53   2e-05
tr|Q8LCQ2|Q8LCQ2_ARATH Putative uncharacterized protein OS=Arabi...    51   7e-05
tr|Q1H5E9|Q1H5E9_ARATH At5g48470 OS=Arabidopsis thaliana PE=2 SV=1     50   1e-04
tr|A7QYY4|A7QYY4_VITVI Chromosome undetermined scaffold_259, who...    49   3e-04
tr|Q9LV67|Q9LV67_ARATH Arabidopsis thaliana genomic DNA, chromos...    44   0.006
tr|Q55CT7|Q55CT7_DICDI Putative uncharacterized protein OS=Dicty...    36   2.3  
tr|A4EBC8|A4EBC8_9ACTN Putative uncharacterized protein OS=Colli...    35   3.0  
tr|A3AL52|A3AL52_ORYSJ Putative uncharacterized protein OS=Oryza...    35   5.1  
tr|P91263|P91263_CAEEL Putative uncharacterized protein OS=Caeno...    35   5.1  
tr|Q53K51|Q53K51_ORYSJ Os11g0425300 protein OS=Oryza sativa subs...    34   6.6  
tr|Q53K50|Q53K50_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    34   6.6  
tr|Q6TVE7|Q6TVE7_9POXV Putative uncharacterized protein OS=Bovin...    34   8.7  

>tr|A9NNU4|A9NNU4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 413

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 22/91 (24%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEEDEESSH---LGRHTS------------------ 117
           ++PGP++R++I +VM GK EG D   EDE +S      RH S                  
Sbjct: 313 LKPGPIVREKILNVMRGKDEGADIVSEDEAASRSEKTSRHKSNQGIQTTGKGRPVRPGMF 372

Query: 118 -ASKRKVLSGMYETNTAGVGVQQLEWIHRET 207
             +  KVL GMYETN AGV VQ LEW+H+ET
Sbjct: 373 LETVTKVLGGMYETNVAGVTVQHLEWVHQET 403


>tr|B6T6G7|B6T6G7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 375

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 23/92 (25%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEEDEESSH---------LGRHTSASKR-------- 129
           ++PG  L + I DVMNG+ EG D  E+    SH         LGR + +  +        
Sbjct: 275 LKPGKALERMIKDVMNGRGEGADNVEQPSADSHSEQESLTGVLGRGSVSGHKPRPVRPGM 334

Query: 130 ------KVLSGMYETNTAGVGVQQLEWIHRET 207
                 KVL G+Y +NT+G+  Q LEW+H+ T
Sbjct: 335 FLETVYKVLGGVYASNTSGITAQHLEWVHQTT 366


>tr|Q53K52|Q53K52_ORYSJ cDNA clone:J013099D01, full insert sequence
           OS=Oryza sativa subsp. japonica GN=LOC_Os11g23790 PE=2
           SV=1
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 23/92 (25%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEE-----DEESSHL------GRHTSASKR------ 129
           ++PG  L + I DVM GKAEG D  E      D + +HL      G  T    R      
Sbjct: 282 LKPGKALERMIKDVMQGKAEGADNIENANAGPDSKLNHLTGISGRGSVTGLKPRPVRPGM 341

Query: 130 ------KVLSGMYETNTAGVGVQQLEWIHRET 207
                 KVL G+Y  NT+G+  Q LEW+H+ T
Sbjct: 342 FLETVSKVLGGIYANNTSGITAQHLEWVHQTT 373


>tr|A9TKW7|A9TKW7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170645 PE=4 SV=1
          Length = 431

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 24/92 (26%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQ---DPPEEDEESSHLGRHTSASKR-------------- 129
           ++PGP L +++A V+ G+ EGQ   DP +  +  +++ R  S  K+              
Sbjct: 306 MKPGPELHKKLARVLAGQDEGQDILDPEKVRQLDNYVARSNSIIKKKEPPPPVLPVRPGL 365

Query: 130 ------KVLSGMYETNTA-GVGVQQLEWIHRE 204
                 KVL GMY TNTA GV VQQ+EWI +E
Sbjct: 366 LIQTVNKVLQGMYSTNTARGVTVQQMEWIRKE 397


>tr|B8B4D8|B8B4D8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_23641 PE=4 SV=1
          Length = 381

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 23/92 (25%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEE-----DEESSHL------GRHTSASKR------ 129
           ++PG  L + I DVM GKAEG D  E      D +  HL      G  T    R      
Sbjct: 281 LKPGKALERMIKDVMQGKAEGADNIENANAGPDSKLDHLTGISGRGSVTGLKPRPVRPGM 340

Query: 130 ------KVLSGMYETNTAGVGVQQLEWIHRET 207
                 KVL G+Y  NT+G+  Q LEW+H+ T
Sbjct: 341 FLETVSKVLGGIYANNTSGITAQHLEWVHQTT 372


>tr|Q8LCQ2|Q8LCQ2_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 397

 Score = 50.8 bits (120), Expect = 7e-05
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEEDEESSHLGRHTSASK------------------ 126
           ++PG  ++Q I +VM GK EG D   ++ +SS  GR  S  K                  
Sbjct: 298 LKPGKTVQQMIQNVMQGKDEGADNLSKESDSSTEGRKPSGLKGRGSVTGRKPLPVRPGMF 357

Query: 127 ----RKVLSGMYETNTAGVGVQQLEWIHRET 207
                KVL  +Y  N +G+  Q LEW+H++T
Sbjct: 358 LETVTKVLGSIYSGNASGITAQHLEWVHQKT 388


>tr|Q1H5E9|Q1H5E9_ARATH At5g48470 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 397

 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 22/91 (24%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEEDEESSHLGRHTSA-------------------- 120
           ++PG  ++Q I +VM GK EG D   ++++SS  GR  S                     
Sbjct: 298 LKPGKTVQQMIQNVMQGKDEGADNLSKEDDSSTEGRKPSGLNGRGSVTGRKPLPVRPGMF 357

Query: 121 --SKRKVLSGMYETNTAGVGVQQLEWIHRET 207
             +  KVL  +Y  N +G+  Q LEW+H++T
Sbjct: 358 LETVTKVLGSIYSGNASGITAQHLEWVHQKT 388


>tr|A7QYY4|A7QYY4_VITVI Chromosome undetermined scaffold_259, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00010395001 PE=4 SV=1
          Length = 350

 Score = 48.5 bits (114), Expect = 3e-04
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEEDEESSHLGRHTSA-------------------- 120
           ++PG  +++ I +VM GK EG D  E D+  S  G+ +                      
Sbjct: 250 LKPGETVQEMIKNVMQGKDEGADNSEGDKGDSSSGKFSGGIAGRSSVTGRKPLPVRPGMF 309

Query: 121 --SKRKVLSGMYETNTAGVGVQQLEWIHRET 207
             +  KVL G+Y  N +G+  Q LEW+H++T
Sbjct: 310 LETVSKVLDGIYGGNISGITAQHLEWVHQKT 340


>tr|Q9LV67|Q9LV67_ARATH Arabidopsis thaliana genomic DNA, chromosome
           5, P1 clone:MJE7 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 364

 Score = 44.3 bits (103), Expect = 0.006
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 22/87 (25%)
 Frame = +1

Query: 1   VRPGPVLRQRIADVMNGKAEGQDPPEEDEESSHLGRHTSA-------------------- 120
           ++PG  ++Q I +VM GK EG D   ++++SS  GR  S                     
Sbjct: 275 LKPGKTVQQMIQNVMQGKDEGADNLSKEDDSSTEGRKPSGLNGRGSVTGRKPLPVRPGMF 334

Query: 121 --SKRKVLSGMYETNTAGVGVQQLEWI 195
             +  KVL  +Y  N +G+  Q LEW+
Sbjct: 335 LETVTKVLGSIYSGNASGITAQHLEWV 361


>tr|Q55CT7|Q55CT7_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0190661 PE=4 SV=1
          Length = 373

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +1

Query: 172 GVQQLEWIHRETGGDRIFIRSPEI-----KWKPASWLLFNVWLPCHTYTYIY 312
           G   L+WIH +TG ++I I    I     +W    W +F +W+P  T  YIY
Sbjct: 162 GKNYLKWIHSQTGLNKIIIFDNSILELFTRWP--WWYIFILWIPIITACYIY 211