BP914916
Clone id YMU001_000064_D02
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATGAACAGTACGAGCGGGATCAGCAGCAGCTACGGCATCATCTCAAGCGAGTCGATTCG
TCTCTGAATGCTCTCTCTCTGGGCTTCCTGGCCGCAGCCCTTCTTGTTTCCGCCTTTCTA
GTTGTCGCCCTCCTCGAGAGGTTTCTTCATCGCCGCCTGCAACCTGCAACTTCTTTTCCT
GCAGCTGCTCTTGACACCCCCTCCGCCATCGAAGTATCGCAGCCTCTTCCTTTTACTCAG
AACACGAACGCTCTTCTTACTGACAAGTTATGTTTATCAGGGGTATCGGTTCTTATGCCA
GGACAAGATATTCCTACTTTTATTGCCAGGCCAGCTCCTTTTATCCCACATCAAGCAATC
GACGGCATTGAGAGAACAGATTCCACTGGAACATGACATATCACCACAAGAGTGCTAGTA
GACTCCAGGATCGACAATAATATGACCTTGTTCAGCTTTGTGTNTGTTTGCTTTACAAAG
CTTGGAAGGGAACAATACTGAAGGTCTTTTCTTCATCAAGCAAGGTTTGAGATAAGGATT
GATATTGATAGCAACACATCAAAGATGATATTCTACAATTCATGTTGTGGGTGTGCT
■■Homology search results ■■ -
sp_hit_id Q9Z330
Definition sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus norvegicus
Align length 37
Score (bit) 31.2
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914916|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_D02.
(597 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Ratt... 31 4.1
sp|Q7SYD5|SC31A_DANRE Protein transport protein Sec31A OS=Danio ... 31 4.2
sp|P33730|LYAM2_CANFA E-selectin OS=Canis familiaris GN=SELE PE=... 30 7.1
sp|Q2JS72|CHLN_SYNJA Light-independent protochlorophyllide reduc... 30 7.1
sp|O94065|MSH4_CANAL MutS protein homolog 4 OS=Candida albicans ... 30 9.3

>sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus
norvegicus GN=Dnmt1 PE=1 SV=2
Length = 1622

Score = 31.2 bits (69), Expect = 4.1
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -3

Query: 193 QEQLQEKKLQVAGGDEETSRGGRQLERRKQEGLRPGS 83
+E+ Q+KK +VAG + SR G +E K E +RPG+
Sbjct: 191 EERDQDKKRRVAGTESRASRAGESVE--KPERVRPGT 225


>sp|Q7SYD5|SC31A_DANRE Protein transport protein Sec31A OS=Danio rerio
GN=sec31a PE=2 SV=1
Length = 1254

Score = 31.2 bits (69), Expect = 4.2
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = +1

Query: 163 PATSFPAAALDTPSAIEVSQPLPFTQNTNALLTDKLCLSGVSVLMPGQDIPTFIARPAPF 342
PA S A P + P P T A L D +G+ L P Q +P A PA F
Sbjct: 1041 PALSRAAKKKKVPQ--HFTPPAPITAPIMAPLGDPQAPAGMQTLQPQQQVPDQSAGPATF 1098

Query: 343 IPHQ 354
P Q
Sbjct: 1099 TPIQ 1102


>sp|P33730|LYAM2_CANFA E-selectin OS=Canis familiaris GN=SELE PE=2
SV=1
Length = 611

Score = 30.4 bits (67), Expect = 7.1
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3

Query: 63 SECSLSGLPGRSPSCFRLSSCRPPREVSSSPPATCNFFSCSCS*HP 200
S C +S G PS + C E S+SPPA CN CS +P
Sbjct: 205 SSCFVSCDKGYLPSSTEATQCTSTGEWSASPPA-CNVVECSALTNP 249


>sp|Q2JS72|CHLN_SYNJA Light-independent protochlorophyllide
reductase subunit N OS=Synechococcus sp. (strain
JA-3-3Ab) GN=chlN PE=3 SV=1
Length = 466

Score = 30.4 bits (67), Expect = 7.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3

Query: 196 CQEQLQEKKLQVAGGDEETSRGGRQLERRKQEGLRPGSP 80
C EQ+QE++ + GG + G R +++++EG P P
Sbjct: 160 CPEQVQEEERETRGGLQALFYGLRSGKKKEEEGFHPHPP 198


>sp|O94065|MSH4_CANAL MutS protein homolog 4 OS=Candida albicans
GN=MSH4 PE=3 SV=1
Length = 803

Score = 30.0 bits (66), Expect = 9.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1

Query: 415 LVDSRIDNNMTLFSFVXVCFTKLGREQY*RSFLHQARFEIRIDIDSNT 558
LVDS + TL+SF+ C TK+G S L + E I + S +
Sbjct: 204 LVDSLSETGTTLYSFLNCCLTKMGMRILRTSILQPSTHENSIILRSES 251


tr_hit_id B6TJI8
Definition tr|B6TJI8|B6TJI8_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 20
Score (bit) 42.4
E-value 0.021
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914916|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_D02.
(597 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6TJI8|B6TJI8_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.021
tr|B6UDI4|B6UDI4_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.035
tr|B6SQC8|B6SQC8_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.035
tr|A7R7K7|A7R7K7_VITVI Chromosome undetermined scaffold_1842, wh... 42 0.035
tr|A7PXE1|A7PXE1_VITVI Chromosome chr12 scaffold_36, whole genom... 41 0.046
tr|A5AET9|A5AET9_VITVI Putative uncharacterized protein OS=Vitis... 41 0.046
tr|Q1SKW7|Q1SKW7_MEDTR Putative uncharacterized protein OS=Medic... 37 0.67
tr|B6U8Y1|B6U8Y1_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.1
tr|B6TUJ6|B6TUJ6_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.1
tr|B6SM77|B6SM77_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.1
tr|Q75HR1|Q75HR1_ORYSJ Os05g0426800 protein OS=Oryza sativa subs... 36 1.5
tr|B6TK95|B6TK95_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.5
tr|A3B478|A3B478_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.5
tr|A2Y4W1|A2Y4W1_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.5
tr|B6SN80|B6SN80_MAIZE Putative uncharacterized protein OS=Zea m... 35 3.3
tr|B2WG00|B2WG00_PYRTR Putative uncharacterized protein OS=Pyren... 35 4.3
tr|A9PAH3|A9PAH3_POPTR Putative uncharacterized protein OS=Popul... 35 4.3
tr|Q8L490|Q8L490_ORYSJ cDNA clone:001-007-E07, full insert seque... 34 5.6
tr|Q1G3Y6|Q1G3Y6_ARATH Putative uncharacterized protein OS=Arabi... 34 5.6
tr|A3A062|A3A062_ORYSJ Putative uncharacterized protein OS=Oryza... 34 5.6
tr|A2WXJ8|A2WXJ8_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.6
tr|A0MDJ4|A0MDJ4_ARATH Putative uncharacterized protein (Fragmen... 34 5.6
tr|A9NZB1|A9NZB1_PICSI Putative uncharacterized protein OS=Picea... 34 7.3
tr|Q0CIH4|Q0CIH4_ASPTN Predicted protein OS=Aspergillus terreus ... 34 7.4
tr|A8P9F2|A8P9F2_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 7.4
tr|Q851X9|Q851X9_ORYSJ Putative AFG1-like ATPase OS=Oryza sativa... 33 9.6
tr|B8ANQ3|B8ANQ3_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.6
tr|A3APU2|A3APU2_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.6

>tr|B6TJI8|B6TJI8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 167

Score = 42.4 bits (98), Expect = 0.021
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1

Query: 280 GVSVLMPGQDIPTFIARPAP 339
GVSVLMPGQD+PTFIA PAP
Sbjct: 122 GVSVLMPGQDVPTFIAHPAP 141


>tr|B6UDI4|B6UDI4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 165

Score = 41.6 bits (96), Expect = 0.035
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1

Query: 280 GVSVLMPGQDIPTFIARPAP 339
GVSVLMPGQD+PTFIA PAP
Sbjct: 120 GVSVLMPGQDMPTFIAHPAP 139


>tr|B6SQC8|B6SQC8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 167

Score = 41.6 bits (96), Expect = 0.035
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1

Query: 280 GVSVLMPGQDIPTFIARPAP 339
GVSVLMPGQD+PTFIA PAP
Sbjct: 122 GVSVLMPGQDMPTFIAHPAP 141


>tr|A7R7K7|A7R7K7_VITVI Chromosome undetermined scaffold_1842, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00010064001 PE=4 SV=1
Length = 105

Score = 41.6 bits (96), Expect = 0.035
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1

Query: 280 GVSVLMPGQDIPTFIARPAP 339
GVSVLMPG+DIPTFIA PAP
Sbjct: 49 GVSVLMPGEDIPTFIAHPAP 68


>tr|A7PXE1|A7PXE1_VITVI Chromosome chr12 scaffold_36, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026003001
PE=4 SV=1
Length = 150

Score = 41.2 bits (95), Expect = 0.046
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1

Query: 136 ERFLHRRLQPATSFPAAALDTPSAIEVSQPLPFTQNTNALLTDKLCLSGVSVLMPGQDIP 315
ERFL R P+ S + P + P + T + GVSVLMPG+ IP
Sbjct: 57 ERFLRPRSSPSGSRTHGDPEAPMMFDGKLRYPSPKMT-------VYARGVSVLMPGEQIP 109

Query: 316 TFIARPAP 339
T+IA PAP
Sbjct: 110 TYIAHPAP 117


>tr|A5AET9|A5AET9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034449 PE=4 SV=1
Length = 150

Score = 41.2 bits (95), Expect = 0.046
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1

Query: 136 ERFLHRRLQPATSFPAAALDTPSAIEVSQPLPFTQNTNALLTDKLCLSGVSVLMPGQDIP 315
ERFL R P+ S + P + P + T + GVSVLMPG+ IP
Sbjct: 57 ERFLRPRSSPSGSRTHGDPEAPMMFDGKLRYPSPKMT-------VYARGVSVLMPGEQIP 109

Query: 316 TFIARPAP 339
T+IA PAP
Sbjct: 110 TYIAHPAP 117


>tr|Q1SKW7|Q1SKW7_MEDTR Putative uncharacterized protein OS=Medicago
truncatula GN=MtrDRAFT_AC140550g31v2 PE=4 SV=2
Length = 161

Score = 37.4 bits (85), Expect = 0.67
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1

Query: 145 LHRRLQPATSFPAAALDTPSAIEVSQPLPFTQNTNA---LLTDKLCLSGVSVLMPGQDIP 315
L + Q +S P + L T + LP T+ NA L + C +SVLMPGQ P
Sbjct: 78 LFKPTQQFSSTPESMLPT---YQEHHSLPTTKQGNAQSVLSSSYAC--DLSVLMPGQQYP 132

Query: 316 TFIARPAP 339
T+IA+PAP
Sbjct: 133 TYIAQPAP 140


>tr|B6U8Y1|B6U8Y1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 183

Score = 36.6 bits (83), Expect = 1.1
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Frame = +1

Query: 262 DKLC-------LSGVSVLMPGQDIPTFIARPAPFIP 348
DKLC + ++VLMPGQ PTF+A+PAP P
Sbjct: 128 DKLCHLPKVEAVVDLTVLMPGQRYPTFLAQPAPLAP 163


>tr|B6TUJ6|B6TUJ6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 165

Score = 36.6 bits (83), Expect = 1.1
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +1

Query: 136 ERFLHRRLQPATSFPAAALDTPSAIEVSQPLPFTQNTNALLTDKLCLSGVSVLMPGQDIP 315
+R LH RL P L +P +E L + +SVLMPGQ P
Sbjct: 96 DRLLHGRLSPGK------LRSPHMVEAV----------------LQAADLSVLMPGQRYP 133

Query: 316 TFIARPAPFIPHQAIDGI 369
T++A+PAP P + +G+
Sbjct: 134 TYLAQPAPLPPPCSREGV 151


>tr|B6SM77|B6SM77_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 183

Score = 36.6 bits (83), Expect = 1.1
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 7/36 (19%)
Frame = +1

Query: 262 DKLC-------LSGVSVLMPGQDIPTFIARPAPFIP 348
DKLC + ++VLMPGQ PTF+A+PAP P
Sbjct: 128 DKLCHLPKVEAVVDLTVLMPGQRYPTFLAQPAPLAP 163