BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914920|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_D06.
         (578 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O10378|L_RYSV Large structural protein OS=Rice yellow stunt v...    34   0.46 
sp|P42948|SET4_YEAST SET domain-containing protein 4 OS=Saccharo...    31   3.9  
sp|Q46814|XDHD_ECOLI Probable hypoxanthine oxidase xdhD OS=Esche...    30   6.7  
sp|Q8XD64|XDHD_ECO57 Probable hypoxanthine oxidase xdhD OS=Esche...    30   6.7  
sp|Q1AVH3|ATP6_RUBXD ATP synthase subunit a OS=Rubrobacter xylan...    30   6.7  
sp|A7FLF7|ACPH_YERP3 Acyl carrier protein phosphodiesterase OS=Y...    30   8.7  

>sp|O10378|L_RYSV Large structural protein OS=Rice yellow stunt
           virus GN=L PE=3 SV=1
          Length = 1967

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = -2

Query: 193 ILHMWNMSHVRMSKKRICLKYKMYLCMEVTTNTLRWESEGPSLALLHTG*TELREFLDHV 14
           I + WN+ H+   K     + +MY  +  T      E     L L++T  T LREFL  V
Sbjct: 461 IPYSWNVLHLAKDKAISPTRSEMYTMLCKTKRVFNAELRRGVLKLMNTTLTPLREFLTEV 520

Query: 13  ASH 5
           A H
Sbjct: 521 AEH 523


>sp|P42948|SET4_YEAST SET domain-containing protein 4
           OS=Saccharomyces cerevisiae GN=SET4 PE=2 SV=1
          Length = 560

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 486 YPYWPLYPTNNETFSLTTYSRAICINN 406
           +P+WPLY  + ET  LT Y R  C  N
Sbjct: 407 HPHWPLYIDSRETGGLTRYIRRSCEPN 433


>sp|Q46814|XDHD_ECOLI Probable hypoxanthine oxidase xdhD
           OS=Escherichia coli (strain K12) GN=xdhD PE=3 SV=1
          Length = 956

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 492 GPYPYWPLYPTNNETFSLTTYSRAICIN 409
           GP    PLYP +N  F +TTY   IC N
Sbjct: 526 GPALSLPLYPCDNVDFQVTTYYSNICPN 553


>sp|Q8XD64|XDHD_ECO57 Probable hypoxanthine oxidase xdhD
           OS=Escherichia coli O157:H7 GN=xdhD PE=3 SV=1
          Length = 956

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 492 GPYPYWPLYPTNNETFSLTTYSRAICIN 409
           GP    PLYP +N  F +TTY   IC N
Sbjct: 526 GPALSLPLYPCDNVDFQVTTYYSNICPN 553


>sp|Q1AVH3|ATP6_RUBXD ATP synthase subunit a OS=Rubrobacter
           xylanophilus (strain DSM 9941 / NBRC 16129) GN=atpB PE=3
           SV=1
          Length = 258

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 238 TYLKQWAPVSVPETHILH--MWNMSHVRMSKKRICLKYKMY 122
           TYLK WAP  +P   +++  MW +  ++   K + L  ++Y
Sbjct: 150 TYLKSWAPADLPAKPLMYPIMWFLHLIQEFTKPLTLALRLY 190


>sp|A7FLF7|ACPH_YERP3 Acyl carrier protein phosphodiesterase
           OS=Yersinia pseudotuberculosis serotype O:1b (strain IP
           31758) GN=acpH PE=3 SV=1
          Length = 193

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
 Frame = +2

Query: 128 LVLQAYSFFRHPYMRHIPHVENMSLWD----RHWRPLFQVCATTKSLGASQICFLDHFQH 295
           LV +A ++F   Y R  P   ++ LWD    RHW  L   CA    L  +Q   L H  H
Sbjct: 57  LVKEARTYFSADYRRVSPITLDV-LWDHFLARHWDQLVPNCALPDFLQHAQSQILPHLPH 115

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914920|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_D06.
         (578 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8BGK7|A8BGK7_GIALA Zinc finger protein OS=Giardia lamblia AT...    35   2.3  

>tr|A8BGK7|A8BGK7_GIALA Zinc finger protein OS=Giardia lamblia ATCC
           50803 GN=GL50803_101011 PE=4 SV=1
          Length = 508

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 158 HPYMRHIPHVENMSLWDRHWRPLFQVCATTKSLGASQICFLDHFQHDV 301
           HP++     +E       +WR    VC+T KS GA +  F  HF HD+
Sbjct: 178 HPFVYGQYRLEAAPGCQHYWRACSSVCSTCKSNGAKKFAFPCHFCHDL 225