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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914922
Clone id YMU001_000064_D08
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACACACCAATAATTTTCCGCGCCTCACAGCATCAGAAAGCCCTTGAAGCTTATCCCCAT
CTTCATACACCTCACTGGACCACAATGCACACATCTTGTGTACCTTCCCACCCCACAGTA
TCCCATCTGTCTTTTTGGGTTTGTTACTTTTCTTCGAAGTCATAGCCAATGTTAATTTCA
TTTAGACACCTAAAGAGCACCCGCAGCTGTTTACCCGCAATCCACAACACCATGCATACC
ACTCCCCCAGAAATAAGGATGGGCCCTTTCGGCACAAGTCACATGCAATGCCACTCTCCC
ACATCCGTGGCTTGGCTTCCACCAGTTTTGACAGAGCAGCCTTCTGAACAGTAACTGAAG
CATTAAGACTAGGATTGGAGGGATAACATTTATCATCAATTGCATCAAGTTCCAACAAAG
GCAAAGACTTTTTATTAAGCACGCATTT
■■Homology search results ■■ -
sp_hit_id P20659
Definition sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax OS=Drosophila melanogaster
Align length 73
Score (bit) 39.7
E-value 0.006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914922|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_D08.
         (448 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax...    40   0.006
sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax...    38   0.017
sp|P55200|HRX_MOUSE Histone-lysine N-methyltransferase HRX OS=Mu...    37   0.038
sp|Q03164|HRX_HUMAN Histone-lysine N-methyltransferase HRX OS=Ho...    37   0.038
sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=...    36   0.086
sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=...    34   0.25 
sp|Q9UMN6|MLL4_HUMAN Histone-lysine N-methyltransferase MLL4 OS=...    34   0.25 
sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=...    33   0.73 
sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=...    33   0.73 
sp|Q61818|RAI1_MOUSE Retinoic acid-induced protein 1 OS=Mus musc...    31   2.1  
sp|Q7Z5J4|RAI1_HUMAN Retinoic acid-induced protein 1 OS=Homo sap...    31   2.8  
sp|O45449|NH108_CAEEL Nuclear hormone receptor family member nhr...    30   3.6  
sp|O04093|RP8L1_ARATH Putative disease resistance protein RPP8-l...    30   4.7  
sp|Q4R4T6|DDX28_MACFA Probable ATP-dependent RNA helicase DDX28 ...    29   8.0  
sp|Q9NUL7|DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 ...    29   8.0  

>sp|P20659|TRX_DROME Histone-lysine N-methyltransferase trithorax
            OS=Drosophila melanogaster GN=trx PE=1 SV=3
          Length = 3726

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208  SCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1725 SCGIKMRLDTRMCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1784

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1785 VHSAVARGRMIKC 1797


>sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax
            OS=Drosophila virilis GN=trx PE=3 SV=1
          Length = 3828

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = -1

Query: 103  VHKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
            VH  CA+WS+EV+E+ D  LQ +  AV RG+++ C
Sbjct: 1737 VHINCAMWSAEVFEEIDGSLQNVHSAVARGRMIKC 1771


>sp|P55200|HRX_MOUSE Histone-lysine N-methyltransferase HRX OS=Mus
            musculus GN=Mll PE=2 SV=2
          Length = 3966

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 100  HKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
            H  CALWS+EV+ED D  L+ +  AV RGK L C
Sbjct: 1902 HVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRC 1935


>sp|Q03164|HRX_HUMAN Histone-lysine N-methyltransferase HRX OS=Homo
            sapiens GN=MLL PE=1 SV=5
          Length = 3969

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 100  HKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
            H  CALWS+EV+ED D  L+ +  AV RGK L C
Sbjct: 1900 HVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRC 1933


>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo
            sapiens GN=MLL2 PE=1 SV=1
          Length = 5262

 Score = 35.8 bits (81), Expect = 0.086
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 118  LWGGKVHKMCALWSSEVYE-DGDKLQGLSDAVRRGKLLVC 2
            LW   VH  CALWS+EVYE  G  L  +  A+ RG L  C
Sbjct: 4781 LW---VHLNCALWSTEVYETQGGALMNVEVALHRGLLTKC 4817


>sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=Mus
            musculus GN=Wbp7 PE=1 SV=2
          Length = 2713

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 100  HKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
            H  CA+WS+EV+E+ D  L+ +  AV RG+ + C
Sbjct: 1614 HVNCAIWSAEVFEENDGSLKNVHAAVARGRQMRC 1647


>sp|Q9UMN6|MLL4_HUMAN Histone-lysine N-methyltransferase MLL4 OS=Homo
            sapiens GN=WBP7 PE=1 SV=1
          Length = 2715

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 100  HKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
            H  CA+WS+EV+E+ D  L+ +  AV RG+ + C
Sbjct: 1608 HVNCAIWSAEVFEENDGSLKNVHAAVARGRQMRC 1641


>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus
            musculus GN=Mll3 PE=2 SV=2
          Length = 4903

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 118  LWGGKVHKMCALWSSEVYE-DGDKLQGLSDAVRRGKLLVC 2
            LW   VH  CALWS+EVYE     L  +  A+RRG  + C
Sbjct: 4418 LW---VHLNCALWSTEVYETQAGALINVELALRRGLQMKC 4454


>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo
            sapiens GN=MLL3 PE=1 SV=3
          Length = 4911

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 118  LWGGKVHKMCALWSSEVYE-DGDKLQGLSDAVRRGKLLVC 2
            LW   VH  CALWS+EVYE     L  +  A+RRG  + C
Sbjct: 4426 LW---VHLNCALWSTEVYETQAGALINVELALRRGLQMKC 4462


>sp|Q61818|RAI1_MOUSE Retinoic acid-induced protein 1 OS=Mus musculus
            GN=Rai1 PE=1 SV=2
          Length = 1889

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 103  VHKMCALWSSEVYEDGDKLQGLSDAVR 23
            VH+ CA+W+S VY    KL GL +A++
Sbjct: 1806 VHEACAVWTSGVYLVAGKLFGLQEAMK 1832
tr_hit_id B4K036
Definition tr|B4K036|B4K036_DROGR GH19675 OS=Drosophila grimshawi
Align length 73
Score (bit) 40.4
E-value 0.045
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914922|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_D08.
         (448 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4K036|B4K036_DROGR GH19675 OS=Drosophila grimshawi GN=GH1967...    40   0.045
tr|B6LPV2|B6LPV2_BRAFL Putative uncharacterized protein (Fragmen...    40   0.059
tr|A7SZK7|A7SZK7_NEMVE Predicted protein (Fragment) OS=Nematoste...    40   0.059
tr|B4N9J9|B4N9J9_DROWI GK10889 OS=Drosophila willistoni GN=GK108...    40   0.077
tr|B3MTV1|B3MTV1_DROAN GF23177 OS=Drosophila ananassae GN=GF2317...    40   0.077
tr|A4V2W0|A4V2W0_DROME Trithorax, isoform C OS=Drosophila melano...    40   0.077
tr|A4V2V9|A4V2V9_DROME Trithorax, isoform D OS=Drosophila melano...    40   0.077
tr|B4PT97|B4PT97_DROYA GE26459 OS=Drosophila yakuba GN=GE26459 P...    39   0.100
tr|B4HF31|B4HF31_DROSE GM25861 OS=Drosophila sechellia GN=GM2586...    39   0.100
tr|B3P0P1|B3P0P1_DROER GG21380 OS=Drosophila erecta GN=GG21380 P...    39   0.100
tr|B5DYH1|B5DYH1_DROPS GA27210 OS=Drosophila pseudoobscura pseud...    39   0.13 
tr|B4KDU4|B4KDU4_DROMO GI24532 OS=Drosophila mojavensis GN=GI245...    39   0.13 
tr|Q071D6|Q071D6_DANRE Myeloid/lymphoid or mixed-lineage leukemi...    39   0.17 
tr|A8VKP8|A8VKP8_DANRE Myeloid/lymphoid or mixed-lineage leukemi...    39   0.17 
tr|A4L9S0|A4L9S0_DANRE Myeloid/lymphoid or mixed-lineage leukemi...    39   0.17 
tr|Q5TTZ4|Q5TTZ4_ANOGA AGAP002741-PA OS=Anopheles gambiae GN=AGA...    38   0.22 
tr|B4M059|B4M059_DROVI Trx OS=Drosophila virilis GN=Dvir\trx PE=...    38   0.22 
tr|O93291|O93291_FUGRU MLL OS=Fugu rubripes GN=MLL PE=4 SV=1           37   0.38 
tr|Q0C776|Q0C776_AEDAE Mixed-lineage leukemia protein, mll (Frag...    37   0.38 
tr|B0X535|B0X535_CULQU Trithorax OS=Culex quinquefasciatus GN=Cp...    37   0.38 
tr|A7RLK2|A7RLK2_NEMVE Predicted protein OS=Nematostella vectens...    37   0.38 
tr|A2I896|A2I896_AEDAE AAEL000054-PA OS=Aedes aegypti GN=Aael_AA...    37   0.38 
tr|A9JRL9|A9JRL9_XENTR Mll protein (Fragment) OS=Xenopus tropica...    37   0.50 
tr|Q5DTR3|Q5DTR3_MOUSE MKIAA4050 protein (Fragment) OS=Mus muscu...    37   0.50 
tr|A2T6N0|A2T6N0_MACNE MLL (Fragment) OS=Macaca nemestrina GN=ML...    37   0.50 
tr|A1YEZ7|A1YEZ7_9PRIM MLL (Fragment) OS=Gorilla gorilla GN=MLL ...    37   0.50 
tr|Q59FF2|Q59FF2_HUMAN Myeloid/lymphoid or mixed-lineage leukemi...    37   0.50 
tr|Q4RW15|Q4RW15_TETNG Chromosome 9 SCAF14991, whole genome shot...    37   0.65 
tr|Q4REM0|Q4REM0_TETNG Chromosome 10 SCAF15123, whole genome sho...    37   0.65 
tr|O93321|O93321_FUGRU All-1 related protein OS=Fugu rubripes GN...    37   0.65 

>tr|B4K036|B4K036_DROGR GH19675 OS=Drosophila grimshawi GN=GH19675
            PE=4 SV=1
          Length = 3837

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
 Frame = -1

Query: 202  GCSLGV*MKLTLAMTSKKSNKPKKTDG--ILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            GC+L   +   + +  +KS +   ++   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1696 GCALKTRLDSRVCLFCRKSGEGLSSEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1755

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1756 VHSAVARGRMIKC 1768


>tr|B6LPV2|B6LPV2_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_210426 PE=4 SV=1
          Length = 154

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -1

Query: 103 VHKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
           VH  CALWS+EVYE+ D  LQ +  A+ RG+ + C
Sbjct: 14  VHANCALWSAEVYEEADGSLQNVHTAISRGRQMRC 48


>tr|A7SZK7|A7SZK7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g194978 PE=4 SV=1
          Length = 634

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = -1

Query: 103 VHKMCALWSSEVYEDGD-KLQGLSDAVRRGKLLVC 2
           VH  C LWS+EV+ED + +LQ +  AV RGK++ C
Sbjct: 503 VHINCGLWSAEVFEDDEGRLQNVQAAVTRGKMMKC 537


>tr|B4N9J9|B4N9J9_DROWI GK10889 OS=Drosophila willistoni GN=GK10889
            PE=4 SV=1
          Length = 3189

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = -1

Query: 214  VNSCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KL 47
            + SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  L
Sbjct: 1604 LGSCGIKMRLDSRVCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSL 1663

Query: 46   QGLSDAVRRGKLLVC 2
            Q +  AV RG+++ C
Sbjct: 1664 QNVHSAVARGRMIKC 1678


>tr|B3MTV1|B3MTV1_DROAN GF23177 OS=Drosophila ananassae GN=GF23177
            PE=4 SV=1
          Length = 3708

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = -1

Query: 214  VNSCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KL 47
            + SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  L
Sbjct: 1713 LGSCGIKMRLDSRVCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSL 1772

Query: 46   QGLSDAVRRGKLLVC 2
            Q +  AV RG+++ C
Sbjct: 1773 QNVHSAVARGRMIKC 1787


>tr|A4V2W0|A4V2W0_DROME Trithorax, isoform C OS=Drosophila
            melanogaster GN=trx PE=4 SV=1
          Length = 3358

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208  SCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1357 SCGIKMRLDTRMCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1416

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1417 VHSAVARGRMIKC 1429


>tr|A4V2V9|A4V2V9_DROME Trithorax, isoform D OS=Drosophila
            melanogaster GN=trx PE=4 SV=1
          Length = 3726

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208  SCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1725 SCGIKMRLDTRMCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1784

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1785 VHSAVARGRMIKC 1797


>tr|B4PT97|B4PT97_DROYA GE26459 OS=Drosophila yakuba GN=GE26459 PE=4
            SV=1
          Length = 2853

 Score = 39.3 bits (90), Expect = 0.100
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208  SCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1740 SCGIKMRLDTRVCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1799

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1800 VHSAVARGRMIKC 1812


>tr|B4HF31|B4HF31_DROSE GM25861 OS=Drosophila sechellia GN=GM25861
            PE=4 SV=1
          Length = 3603

 Score = 39.3 bits (90), Expect = 0.100
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208  SCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1723 SCGIKMRLDTRVCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1782

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1783 VHSAVARGRMIKC 1795


>tr|B3P0P1|B3P0P1_DROER GG21380 OS=Drosophila erecta GN=GG21380 PE=4
            SV=1
          Length = 3741

 Score = 39.3 bits (90), Expect = 0.100
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 208  SCGCSLGV*MKLTLAMTSKKSNKPKKTDGILWGGK---VHKMCALWSSEVYEDGD-KLQG 41
            SCG  + +  ++ L           +   +L+ G    VH  CA+WS+EV+E+ D  LQ 
Sbjct: 1739 SCGIKMRLDTRVCLFCRKSGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQN 1798

Query: 40   LSDAVRRGKLLVC 2
            +  AV RG+++ C
Sbjct: 1799 VHSAVARGRMIKC 1811