BP914925 |
Clone id |
YMU001_000064_D12 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_D12. |
Accession |
BP914925 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL545Contig1 |
Sequence |
TATAATGCAAATGCTGTAGCACTGAACTGGATAACGCTGATTGAGGATAGTAAGATGAGC CCAACATTGAATAAAAAGAATTCATCAAAGTTCCTCCCCATTTCATTGGATGGATTGTGA CAAATACAAGTCGTAGTCCAAGCTGCATCTCCCCCGTCCATTACAGCCAAAAGAAGGTAA AAGCAGAAAAAAGCAAATGCAGCAGTCCCAAAGAGTCCCCAAACATTGTCAAGCTTGATA AAGACCTCATTCAAAAAAGGTGAGACTGGAGGCTGAAGCAGCATGTACAAAATGATATGC AGCACCCATATCACAGACACAACCAATCCTATTATACCGAGCACAAAGTTCACGAGATAT CCTATCACAGTTAAGGCCCAAGATGTATCCGCCTTCTCTCCCTGAGGGTAAACTTCTTCC AAAGCTTTCACATCATCTTCCAAAAGCAGGAGTTCCTGTTGTACTGCCTTCACATTTTGT CTCCATTTTCGACCTTTACTGCCACTTCTCTCTTCCCGTTGGAGAGCAAGTGCAAGCTCC CGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8MS27 |
Definition |
sp|Q8MS27|RM35_DROME 39S ribosomal protein L35, mitochondrial OS=Drosophila melanogaster |
Align length |
31 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PP47 |
Definition |
tr|A7PP47|A7PP47_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
178 |
Score (bit) |
181.0 |
E-value |
3.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914925|Adiantum capillus-veneris mRNA, clone: YMU001_000064_D12. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PP47|A7PP47_VITVI Chromosome chr8 scaffold_23, whole genome... 181 3e-44 tr|Q9M028|Q9M028_ARATH Putative uncharacterized protein T10O8_17... 173 5e-42 tr|Q9SR93|Q9SR93_ARATH T16O11.13 protein OS=Arabidopsis thaliana... 172 1e-41 tr|Q94C82|Q94C82_ARATH Putative uncharacterized protein At3g0893... 172 1e-41 tr|B4F9B7|B4F9B7_MAIZE Putative uncharacterized protein OS=Zea m... 170 5e-41 tr|Q658I5|Q658I5_ORYSJ Os06g0128200 protein OS=Oryza sativa subs... 166 6e-40 tr|Q658I4|Q658I4_ORYSJ LMBR1 integral membrane family protein-li... 166 6e-40 tr|B8B1Y6|B8B1Y6_ORYSI Putative uncharacterized protein OS=Oryza... 166 6e-40 tr|A9T3A3|A9T3A3_PHYPA Predicted protein OS=Physcomitrella paten... 162 1e-38 tr|B4FIN5|B4FIN5_MAIZE Putative uncharacterized protein OS=Zea m... 117 4e-25 tr|Q00XD3|Q00XD3_OSTTA LMBR1 integral membrane family protein-li... 102 1e-20 tr|A4S681|A4S681_OSTLU Predicted protein OS=Ostreococcus lucimar... 100 6e-20 tr|A8HPZ9|A8HPZ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 98 2e-19 tr|A3B7Z5|A3B7Z5_ORYSJ Putative uncharacterized protein OS=Oryza... 95 3e-18 tr|Q54QP7|Q54QP7_DICDI Putative uncharacterized protein OS=Dicty... 71 3e-11 tr|Q54BI3|Q54BI3_DICDI Putative uncharacterized protein OS=Dicty... 70 9e-11 tr|B7GCP5|B7GCP5_PHATR Predicted protein (Fragment) OS=Phaeodact... 56 1e-06 tr|B8BZW6|B8BZW6_THAPS Predicted protein OS=Thalassiosira pseudo... 50 1e-04 tr|Q4Q9X7|Q4Q9X7_LEIMA Putative uncharacterized protein OS=Leish... 42 0.027 tr|A4I1F8|A4I1F8_LEIIN Putative uncharacterized protein OS=Leish... 42 0.027 tr|A0DVS5|A0DVS5_PARTE Chromosome undetermined scaffold_66, whol... 42 0.027 tr|A4HE60|A4HE60_LEIBR Putative uncharacterized protein OS=Leish... 41 0.046 tr|A5KAD9|A5KAD9_PLAVI Putative uncharacterized protein OS=Plasm... 40 0.10 tr|Q57XX2|Q57XX2_9TRYP Putative uncharacterized protein OS=Trypa... 39 0.23 tr|Q4CQJ4|Q4CQJ4_TRYCR Putative uncharacterized protein OS=Trypa... 37 0.67 tr|Q4DTX8|Q4DTX8_TRYCR Putative uncharacterized protein OS=Trypa... 36 1.5 tr|B6NM24|B6NM24_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6 tr|A2F531|A2F531_TRIVA Viral A-type inclusion protein, putative ... 35 2.6 tr|Q22CC8|Q22CC8_TETTH LMBR1-like conserved region family protei... 35 3.3 tr|A0E1B4|A0E1B4_PARTE Chromosome undetermined scaffold_73, whol... 34 5.7
>tr|A7PP47|A7PP47_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021508001 PE=4 SV=1 Length = 509
Score = 181 bits (458), Expect = 3e-44 Identities = 98/178 (55%), Positives = 116/178 (65%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A AL +EERSGSKGRKWR+NVKAV++ELL LEDDVKALEE+YPQGEKA+T+WALTV+ Sbjct: 267 KKAADALHQEERSGSKGRKWRKNVKAVEKELLQLEDDVKALEEMYPQGEKAETTWALTVL 326
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GYL HI++Y+L+ PP+SPFLNEVFIKLD+VWGL GT Sbjct: 327 GYLAKLVLGILGLIVSVAWIAHIVIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFC 386
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAF 9 AV+ G + G FLFNVGLILL SISVIQF ATAF Sbjct: 387 FYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAF 444
>tr|Q9M028|Q9M028_ARATH Putative uncharacterized protein T10O8_170 OS=Arabidopsis thaliana GN=T10O8_170 PE=2 SV=1 Length = 509
Score = 173 bits (439), Expect = 5e-42 Identities = 94/178 (52%), Positives = 114/178 (64%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A AL +EERSG+KGRKWR+NVKAV++ELL LE+DV LEE+YPQGE+A+T+WA TV+ Sbjct: 267 KKAADALHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVL 326
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GYL F HII+Y+L+ PP+SPFLNEVFIKLD+VWGL GT Sbjct: 327 GYLAKFVLGILGLIVSVAWIAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFC 386
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAF 9 AV+ G + G FLFNVGLILL SISVIQF ATAF Sbjct: 387 FYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAF 444
>tr|Q9SR93|Q9SR93_ARATH T16O11.13 protein OS=Arabidopsis thaliana GN=T16O11.13 PE=4 SV=1 Length = 482
Score = 172 bits (435), Expect = 1e-41 Identities = 93/178 (52%), Positives = 113/178 (63%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A L +EERSG+KGRKWR+NVKAV++ELL LE+DV LEE+YPQGE+A+T+WA TV+ Sbjct: 251 KKAADGLHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVL 310
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GYL F HII+Y+L+ PP+SPFLNEVFIKLD+VWGL GT Sbjct: 311 GYLAKFILGIVGLIVSIAWVAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFC 370
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAF 9 AV+ G + G FLFNVGLILL SISVIQF ATAF Sbjct: 371 FYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAF 428
>tr|Q94C82|Q94C82_ARATH Putative uncharacterized protein At3g08930 (Uncharacterized protein At3g08930.1) (At3g08930) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At3g08930 PE=2 SV=1 Length = 509
Score = 172 bits (435), Expect = 1e-41 Identities = 93/178 (52%), Positives = 113/178 (63%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A L +EERSG+KGRKWR+NVKAV++ELL LE+DV LEE+YPQGE+A+T+WA TV+ Sbjct: 267 KKAADGLHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVL 326
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GYL F HII+Y+L+ PP+SPFLNEVFIKLD+VWGL GT Sbjct: 327 GYLAKFILGIVGLIVSIAWVAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFC 386
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAF 9 AV+ G + G FLFNVGLILL SISVIQF ATAF Sbjct: 387 FYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAF 444
>tr|B4F9B7|B4F9B7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 510
Score = 170 bits (430), Expect = 5e-41 Identities = 92/179 (51%), Positives = 114/179 (63%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A AL +EERSG+KGRKWR+NVKA+++ELLLLEDD+KALEE+YPQGE+A+ +WA TV+ Sbjct: 268 KKAAEALHQEERSGNKGRKWRKNVKALEKELLLLEDDMKALEEMYPQGEQAEATWAFTVL 327
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GY+ HI++Y+L+ PP+S FLNEVFIKLD VWGL GT Sbjct: 328 GYIGKLLFGVVGLIVSIAWVAHIVIYLLIDPPLSSFLNEVFIKLDGVWGLLGTAAFAFFC 387
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAFA 6 AV+ G + G FLFNVGLILL SISVIQF ATAFA Sbjct: 388 FYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCATAFA 446
>tr|Q658I5|Q658I5_ORYSJ Os06g0128200 protein OS=Oryza sativa subsp. japonica GN=P0538C01.4-1 PE=2 SV=1 Length = 510
Score = 166 bits (421), Expect = 6e-40 Identities = 89/179 (49%), Positives = 113/179 (63%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A AL +EE+SG KGRKWR+NVKA+ +EL+LLEDD+KALEE+YPQGE+A+ +WALTV+ Sbjct: 268 KKAAEALHQEEKSGKKGRKWRKNVKALGKELVLLEDDMKALEEMYPQGEQAEATWALTVL 327
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GY+ HI++Y+L+ PP+S FLNE+F+KLD VWGL GT Sbjct: 328 GYIGKLLFGAVGLIISIAWVAHIVIYLLIDPPLSSFLNEIFVKLDGVWGLLGTAAFAFFC 387
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAFA 6 AV+ G + G FLFNVGLILL SISVIQF ATAFA Sbjct: 388 FYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCATAFA 446
>tr|Q658I4|Q658I4_ORYSJ LMBR1 integral membrane family protein-like OS=Oryza sativa subsp. japonica GN=P0538C01.4-2 PE=4 SV=1 Length = 440
Score = 166 bits (421), Expect = 6e-40 Identities = 89/179 (49%), Positives = 113/179 (63%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A AL +EE+SG KGRKWR+NVKA+ +EL+LLEDD+KALEE+YPQGE+A+ +WALTV+ Sbjct: 198 KKAAEALHQEEKSGKKGRKWRKNVKALGKELVLLEDDMKALEEMYPQGEQAEATWALTVL 257
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GY+ HI++Y+L+ PP+S FLNE+F+KLD VWGL GT Sbjct: 258 GYIGKLLFGAVGLIISIAWVAHIVIYLLIDPPLSSFLNEIFVKLDGVWGLLGTAAFAFFC 317
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAFA 6 AV+ G + G FLFNVGLILL SISVIQF ATAFA Sbjct: 318 FYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCATAFA 376
>tr|B8B1Y6|B8B1Y6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21464 PE=4 SV=1 Length = 510
Score = 166 bits (421), Expect = 6e-40 Identities = 89/179 (49%), Positives = 113/179 (63%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEKADTSWALTVI 363 ++ A AL +EE+SG KGRKWR+NVKA+ +EL+LLEDD+KALEE+YPQGE+A+ +WALTV+ Sbjct: 268 KKAAEALHQEEKSGKKGRKWRKNVKALGKELVLLEDDMKALEEMYPQGEQAEATWALTVL 327
Query: 362 GYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXXX 183 GY+ HI++Y+L+ PP+S FLNE+F+KLD VWGL GT Sbjct: 328 GYIGKLLFGAVGLIISIAWVAHIVIYLLIDPPLSSFLNEIFVKLDGVWGLLGTAAFAFFC 387
Query: 182 XXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAFA 6 AV+ G + G FLFNVGLILL SISVIQF ATAFA Sbjct: 388 FYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCATAFA 446
>tr|A9T3A3|A9T3A3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_139521 PE=4 SV=1 Length = 514
Score = 162 bits (409), Expect = 1e-38 Identities = 90/181 (49%), Positives = 113/181 (62%), Gaps = 1/181 (0%) Frame = -2
Query: 542 RELALALQREERSGSKGRKWRQNVKAVQQELLLLEDDVKALEEVYPQGEK-ADTSWALTV 366 +E ALALQRE+RSGSK RKW+ NV VQ+EL+ LE+D +ALEEVYPQGEK ADTSWALTV Sbjct: 272 KEAALALQREQRSGSKSRKWKTNVHKVQKELMYLEEDERALEEVYPQGEKQADTSWALTV 331
Query: 365 IGYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFLNEVFIKLDNVWGLFGTXXXXXX 186 +GYL +HII+YML+ PP++PFLN +FI+LDN WGL GT Sbjct: 332 LGYLGGLVFGIIGLLVSVVWVVHIIIYMLITPPLTPFLNWIFIRLDNFWGLLGTVAFAFF 391
Query: 185 XXXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFLFNVGLILLSSISVIQFSATAFA 6 AV+ G ++ + FLFNV L+L+ SISVIQF A +FA Sbjct: 392 CCYLLIAVISGQMHLSLNILFVAIHPMKLNGTYMSSFLFNVELVLICSISVIQFCAKSFA 451
Query: 5 L 3 + Sbjct: 452 V 452
>tr|B4FIN5|B4FIN5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 206
Score = 117 bits (293), Expect = 4e-25 Identities = 66/142 (46%), Positives = 80/142 (56%) Frame = -2
Query: 431 VKALEEVYPQGEKADTSWALTVIGYLVNFXXXXXXXXXXXXXXLHIILYMLLQPPVSPFL 252 +KALEE+YPQGE+A+ +WA TV+GY+ HI++Y+L+ PP+S FL Sbjct: 1 MKALEEMYPQGEQAEATWAFTVLGYIGKLLFGVVGLIVSIAWVAHIVIYLLIDPPLSSFL 60
Query: 251 NEVFIKLDNVWGLFGTXXXXXXXXXXXXAVMDGGDAAWTTTCICHNPSNEMGRNFDEFFL 72 NEVFIKLD VWGL GT AV+ G + G FL Sbjct: 61 NEVFIKLDGVWGLLGTAAFAFFCFYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLMNSFL 120
Query: 71 FNVGLILLSSISVIQFSATAFA 6 FNVGLILL SISVIQF ATAFA Sbjct: 121 FNVGLILLCSISVIQFCATAFA 142
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