BP914927 |
Clone id |
YMU001_000064_E02 |
Library |
YMU01 |
Length |
472 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_E02. |
Accession |
BP914927 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3679Contig1 |
Sequence |
GGGAAGAGAGTCATGGTGCGTGGAAAGACATATTTAAAAGACTATTTGAAGGTTTCTGGT GGAGAACCTTTATTAAAGCTTCTTGCAGTGGACTGGTTTCAGTCAGACAATAGGGTAGAT GCTGTTGCGTCTAATAAAAACTCCCTGGTCCAGTCTGAAGCAGCAAAGAAACTACCATTC CTTCTGGTAATAAATCTACAGGTGCCAGCCACCCCAAATTATAGCTTGGTATATTACTTC GGAGCTTCAAAAGAAATTCGTAAAGGATCACTACTAGATCGGTTTGTTAGCGGAAGTGAT GCCTATAGGGACTCACGCTTCAAGCTCATACCCCGCATTGCGGAGGGTTACTGGTTTGTA AAGCGCGCTGTCGGTACAAAAGCATGCCTTTTAGGCAAGGCTGTATCTTGCCGATACCTT CGTGAAGACAACTACTTGGAAATTGATGTGGATATAGGATCATCCTCTGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P93022 |
Definition |
sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thaliana |
Align length |
39 |
Score (bit) |
32.0 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6Z9J1 |
Definition |
tr|Q6Z9J1|Q6Z9J1_ORYSJ Os08g0439100 protein OS=Oryza sativa subsp. japonica |
Align length |
157 |
Score (bit) |
239.0 |
E-value |
5.0e-62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914927|Adiantum capillus-veneris mRNA, clone: YMU001_000064_E02. (472 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6Z9J1|Q6Z9J1_ORYSJ Os08g0439100 protein OS=Oryza sativa subs... 239 5e-62 tr|B8BB25|B8BB25_ORYSI Putative uncharacterized protein OS=Oryza... 239 5e-62 tr|A3BTH9|A3BTH9_ORYSJ Putative uncharacterized protein OS=Oryza... 239 5e-62 tr|A7QS07|A7QS07_VITVI Chromosome undetermined scaffold_155, who... 228 9e-59 tr|A9TP96|A9TP96_PHYPA Predicted protein OS=Physcomitrella paten... 225 1e-57 tr|A9SLK4|A9SLK4_PHYPA Predicted protein OS=Physcomitrella paten... 225 1e-57 tr|Q9LHS2|Q9LHS2_ARATH Emb|CAB77600.1 OS=Arabidopsis thaliana PE... 221 2e-56 tr|Q8W553|Q8W553_ARATH AT5g35180/T25C13_60 (Putative uncharacter... 221 2e-56 tr|B3H5W6|B3H5W6_ARATH Uncharacterized protein At5g35180.2 OS=Ar... 221 2e-56 tr|A9SZ78|A9SZ78_PHYPA Predicted protein OS=Physcomitrella paten... 214 2e-54 tr|A9TYU1|A9TYU1_PHYPA Predicted protein OS=Physcomitrella paten... 210 2e-53 tr|Q337P5|Q337P5_ORYSJ Pleckstriny domain-containing protein, pu... 165 9e-40 tr|Q0IXA1|Q0IXA1_ORYSJ Os10g0455900 protein OS=Oryza sativa subs... 165 9e-40 tr|B8BH86|B8BH86_ORYSI Putative uncharacterized protein OS=Oryza... 165 9e-40 tr|A9SMP0|A9SMP0_PHYPA Predicted protein OS=Physcomitrella paten... 159 7e-38 tr|A9TW70|A9TW70_PHYPA Predicted protein OS=Physcomitrella paten... 156 6e-37 tr|Q56W91|Q56W91_ARATH Putative uncharacterized protein At4g1904... 155 7e-37 tr|B3H6R3|B3H6R3_ARATH Uncharacterized protein At4g19040.2 OS=Ar... 155 7e-37 tr|A7QHC7|A7QHC7_VITVI Chromosome chr2 scaffold_97, whole genome... 154 2e-36 tr|Q8VZF6|Q8VZF6_ARATH AT5g45560/MFC19_23 OS=Arabidopsis thalian... 153 4e-36 tr|Q56Y93|Q56Y93_ARATH Putative uncharacterized protein At2g2832... 153 4e-36 tr|Q0WW23|Q0WW23_ARATH Putative uncharacterized protein At2g2832... 153 4e-36 tr|A3C5E1|A3C5E1_ORYSJ Putative uncharacterized protein OS=Oryza... 153 4e-36 tr|A7NZK6|A7NZK6_VITVI Chromosome chr6 scaffold_3, whole genome ... 150 4e-35 tr|B8BHH9|B8BHH9_ORYSI Putative uncharacterized protein OS=Oryza... 149 7e-35 tr|B4FBT3|B4FBT3_MAIZE Putative uncharacterized protein OS=Zea m... 149 9e-35 tr|Q9AV46|Q9AV46_ORYSJ Putative uncharacterized protein OSJNBa00... 148 2e-34 tr|Q7XDB5|Q7XDB5_ORYSJ Pleckstriny domain-containing protein, pu... 148 2e-34 tr|A9TKT1|A9TKT1_PHYPA Predicted protein OS=Physcomitrella paten... 147 2e-34 tr|A9SRL7|A9SRL7_PHYPA Predicted protein (Fragment) OS=Physcomit... 145 8e-34
>tr|Q6Z9J1|Q6Z9J1_ORYSJ Os08g0439100 protein OS=Oryza sativa subsp. japonica GN=P0524F03.11 PE=2 SV=1 Length = 763
Score = 239 bits (610), Expect = 5e-62 Identities = 113/157 (71%), Positives = 135/157 (85%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G++ M+RGKTYL DY KV GG+PLLKL+AVDWF++D R D+VA + SLVQSEAAKK+PF Sbjct: 555 GEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPF 614
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNY+LV Y+ A + + K SLL RF+ G+DA+RD+RFKLIP I EGYW V Sbjct: 615 ILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMV 674
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV Sbjct: 675 KRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSV 711
>tr|B8BB25|B8BB25_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29366 PE=4 SV=1 Length = 812
Score = 239 bits (610), Expect = 5e-62 Identities = 113/157 (71%), Positives = 135/157 (85%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G++ M+RGKTYL DY KV GG+PLLKL+AVDWF++D R D+VA + SLVQSEAAKK+PF Sbjct: 604 GEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPF 663
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNY+LV Y+ A + + K SLL RF+ G+DA+RD+RFKLIP I EGYW V Sbjct: 664 ILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMV 723
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV Sbjct: 724 KRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSV 760
>tr|A3BTH9|A3BTH9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026351 PE=4 SV=1 Length = 876
Score = 239 bits (610), Expect = 5e-62 Identities = 113/157 (71%), Positives = 135/157 (85%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G++ M+RGKTYL DY KV GG+PLLKL+AVDWF++D R D+VA + SLVQSEAAKK+PF Sbjct: 668 GEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPF 727
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNY+LV Y+ A + + K SLL RF+ G+DA+RD+RFKLIP I EGYW V Sbjct: 728 ILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMV 787
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV Sbjct: 788 KRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSV 824
>tr|A7QS07|A7QS07_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005620001 PE=4 SV=1 Length = 351
Score = 228 bits (582), Expect = 9e-59 Identities = 107/157 (68%), Positives = 131/157 (83%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G M+RGKTYL+D KV GG+PLLKL+AVDWF++DN ++ +A + SLVQ EA KKLPF Sbjct: 141 GAGFMIRGKTYLEDNYKVMGGDPLLKLIAVDWFKADNTMNKIALHPKSLVQCEAGKKLPF 200
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +L+INL++PA PNYSLV Y+ A + + K SLL +FV G+D +RDSRFKLIP I EGYW V Sbjct: 201 ILIINLEIPAKPNYSLVLYYAADRPVNKNSLLGKFVDGTDMFRDSRFKLIPSIVEGYWMV 260
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSSSV Sbjct: 261 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSSV 297
>tr|A9TP96|A9TP96_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_196926 PE=4 SV=1 Length = 743
Score = 225 bits (573), Expect = 1e-57 Identities = 110/157 (70%), Positives = 128/157 (81%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 GK MVR TY D LK +GG+PLLKLLAVDW +SD R+D VA + VQS+A KK PF Sbjct: 535 GKGFMVRSVTYNNDGLKTTGGDPLLKLLAVDWLKSDKRIDNVAKRPSCCVQSDAGKKAPF 594
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +L+INLQVPA+PNYSLV YF + + IR+GSLLDRF +G +A+R+SRFKLIP I EGYW V Sbjct: 595 ILIINLQVPASPNYSLVMYFVSERPIRQGSLLDRFANGDNAFRNSRFKLIPSIVEGYWVV 654
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C Y REDN+LEIDVDIGSSSV Sbjct: 655 KRAVGTKACLLGKAVTCNYFREDNFLEIDVDIGSSSV 691
>tr|A9SLK4|A9SLK4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131952 PE=4 SV=1 Length = 743
Score = 225 bits (573), Expect = 1e-57 Identities = 111/157 (70%), Positives = 128/157 (81%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 GK MVRG TY D LK+SGGEPLL LLAVDW +SD+R+D +A + VQS A +K PF Sbjct: 528 GKGFMVRGVTYNDDNLKISGGEPLLNLLAVDWLKSDHRIDHIALQSSCCVQSVAGRKAPF 587
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNYSLV YF A + I+ GSLLD+F +G DA+R+SRFKLIP I EGYW V Sbjct: 588 ILVINLQVPAKPNYSLVMYFVADRPIQPGSLLDQFANGDDAFRNSRFKLIPSIVEGYWMV 647
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV Sbjct: 648 KRAVGTKACLLGKAVTCNYLRKDNFLEIDVDIGSSSV 684
>tr|Q9LHS2|Q9LHS2_ARATH Emb|CAB77600.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 767
Score = 221 bits (562), Expect = 2e-56 Identities = 105/157 (66%), Positives = 127/157 (80%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G M+RGKTYLKD KV GG+PLL L++VDWF+ D+ VD +A + L+QSE KKLPF Sbjct: 557 GMGFMIRGKTYLKDNAKVMGGQPLLTLISVDWFKVDSAVDNIALHPKCLIQSEPGKKLPF 616
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNY LV Y+ A + + K S L +FV GSD+YRD+RFKLIP I +GYW V Sbjct: 617 ILVINLQVPAKPNYCLVLYYAADRPVNKTSSLGKFVDGSDSYRDARFKLIPSIVQGYWMV 676
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSS+V Sbjct: 677 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAV 713
>tr|Q8W553|Q8W553_ARATH AT5g35180/T25C13_60 (Putative uncharacterized protein At5g35180) OS=Arabidopsis thaliana GN=At5g35180 PE=2 SV=1 Length = 778
Score = 221 bits (562), Expect = 2e-56 Identities = 105/157 (66%), Positives = 127/157 (80%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G M+RGKTYLKD KV GG+PLL L++VDWF+ D+ VD +A + L+QSE KKLPF Sbjct: 568 GMGFMIRGKTYLKDNAKVMGGQPLLTLISVDWFKVDSAVDNIALHPKCLIQSEPGKKLPF 627
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNY LV Y+ A + + K S L +FV GSD+YRD+RFKLIP I +GYW V Sbjct: 628 ILVINLQVPAKPNYCLVLYYAADRPVNKTSSLGKFVDGSDSYRDARFKLIPSIVQGYWMV 687
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSS+V Sbjct: 688 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAV 724
>tr|B3H5W6|B3H5W6_ARATH Uncharacterized protein At5g35180.2 OS=Arabidopsis thaliana GN=At5g35180 PE=4 SV=1 Length = 778
Score = 221 bits (562), Expect = 2e-56 Identities = 105/157 (66%), Positives = 127/157 (80%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 G M+RGKTYLKD KV GG+PLL L++VDWF+ D+ VD +A + L+QSE KKLPF Sbjct: 568 GMGFMIRGKTYLKDNAKVMGGQPLLTLISVDWFKVDSAVDNIALHPKCLIQSEPGKKLPF 627
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQVPA PNY LV Y+ A + + K S L +FV GSD+YRD+RFKLIP I +GYW V Sbjct: 628 ILVINLQVPAKPNYCLVLYYAADRPVNKTSSLGKFVDGSDSYRDARFKLIPSIVQGYWMV 687
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSS+V Sbjct: 688 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAV 724
>tr|A9SZ78|A9SZ78_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137879 PE=4 SV=1 Length = 730
Score = 214 bits (544), Expect = 2e-54 Identities = 105/157 (66%), Positives = 124/157 (78%) Frame = +1
Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180 GK M+R KTY ++ LK+SGG+PLLKL+AVDW +SD R+D +A VQS +K PF Sbjct: 517 GKGFMIRSKTYDENRLKISGGDPLLKLMAVDWLKSDQRIDQIALQSCCCVQSPVGRKAPF 576
Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360 +LVINLQV A P YSLV YF A K I+ GSLLD+F +G DA+R+SRFKLIP I EGYW V Sbjct: 577 ILVINLQVCAKPKYSLVMYFVADKPIQPGSLLDQFANGDDAFRNSRFKLIPSIVEGYWMV 636
Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471 KRAVGTKACLLG AV+C YLR+DN+LEIDVDIGSSSV Sbjct: 637 KRAVGTKACLLGNAVTCNYLRKDNFLEIDVDIGSSSV 673
|