BP914927
Clone id YMU001_000064_E02
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000064_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGGAAGAGAGTCATGGTGCGTGGAAAGACATATTTAAAAGACTATTTGAAGGTTTCTGGT
GGAGAACCTTTATTAAAGCTTCTTGCAGTGGACTGGTTTCAGTCAGACAATAGGGTAGAT
GCTGTTGCGTCTAATAAAAACTCCCTGGTCCAGTCTGAAGCAGCAAAGAAACTACCATTC
CTTCTGGTAATAAATCTACAGGTGCCAGCCACCCCAAATTATAGCTTGGTATATTACTTC
GGAGCTTCAAAAGAAATTCGTAAAGGATCACTACTAGATCGGTTTGTTAGCGGAAGTGAT
GCCTATAGGGACTCACGCTTCAAGCTCATACCCCGCATTGCGGAGGGTTACTGGTTTGTA
AAGCGCGCTGTCGGTACAAAAGCATGCCTTTTAGGCAAGGCTGTATCTTGCCGATACCTT
CGTGAAGACAACTACTTGGAAATTGATGTGGATATAGGATCATCCTCTGTTG
■■Homology search results ■■ -
sp_hit_id P93022
Definition sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thaliana
Align length 39
Score (bit) 32.0
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914927|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_E02.
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thal... 32 1.4
sp|P49425|MANA_RHOMR Mannan endo-1,4-beta-mannosidase OS=Rhodoth... 30 4.1
sp|Q2GA45|RL11_NOVAD 50S ribosomal protein L11 OS=Novosphingobiu... 30 7.1

>sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis
thaliana GN=ARF7 PE=1 SV=2
Length = 1164

Score = 32.0 bits (71), Expect = 1.4
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -1

Query: 448 HQFPSSCLHEGIGKIQPCLKGMLLYRQRALQTSNPPQCG 332
HQFPSSC + G+ +QP ML+ R + Q NPP G
Sbjct: 792 HQFPSSCTNNGLSTLQP--PQMLVSRPQEKQ--NPPVGG 826


>sp|P49425|MANA_RHOMR Mannan endo-1,4-beta-mannosidase
OS=Rhodothermus marinus GN=manA PE=1 SV=2
Length = 1021

Score = 30.4 bits (67), Expect = 4.1
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 15/68 (22%)
Frame = -3

Query: 269 DPLRISFEAPK*YTKL*FGVAGTCRF---------------ITRRNGSFFAASDWTREFL 135
D +R SFEAP+ ++ FGV+ + RF + +R G FF AS E
Sbjct: 515 DSVRFSFEAPRGVYRVVFGVSFSSRFASYALRVDDWHQTGSLIKRGGGFFEAS--IGEIW 572

Query: 134 LDATASTL 111
LD A T+
Sbjct: 573 LDEGAHTM 580


>sp|Q2GA45|RL11_NOVAD 50S ribosomal protein L11 OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=rplK PE=3 SV=1
Length = 143

Score = 29.6 bits (65), Expect = 7.1
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1

Query: 244 ASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFVKRAVGTKA 384
A++EI KG+ L ++ Y D F + + +F+K+AVG K+
Sbjct: 45 ATQEIEKGTPLPTVIT---VYADRSFTFVTKTPPATFFIKKAVGIKS 88


tr_hit_id Q6Z9J1
Definition tr|Q6Z9J1|Q6Z9J1_ORYSJ Os08g0439100 protein OS=Oryza sativa subsp. japonica
Align length 157
Score (bit) 239.0
E-value 5.0e-62
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914927|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_E02.
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6Z9J1|Q6Z9J1_ORYSJ Os08g0439100 protein OS=Oryza sativa subs... 239 5e-62
tr|B8BB25|B8BB25_ORYSI Putative uncharacterized protein OS=Oryza... 239 5e-62
tr|A3BTH9|A3BTH9_ORYSJ Putative uncharacterized protein OS=Oryza... 239 5e-62
tr|A7QS07|A7QS07_VITVI Chromosome undetermined scaffold_155, who... 228 9e-59
tr|A9TP96|A9TP96_PHYPA Predicted protein OS=Physcomitrella paten... 225 1e-57
tr|A9SLK4|A9SLK4_PHYPA Predicted protein OS=Physcomitrella paten... 225 1e-57
tr|Q9LHS2|Q9LHS2_ARATH Emb|CAB77600.1 OS=Arabidopsis thaliana PE... 221 2e-56
tr|Q8W553|Q8W553_ARATH AT5g35180/T25C13_60 (Putative uncharacter... 221 2e-56
tr|B3H5W6|B3H5W6_ARATH Uncharacterized protein At5g35180.2 OS=Ar... 221 2e-56
tr|A9SZ78|A9SZ78_PHYPA Predicted protein OS=Physcomitrella paten... 214 2e-54
tr|A9TYU1|A9TYU1_PHYPA Predicted protein OS=Physcomitrella paten... 210 2e-53
tr|Q337P5|Q337P5_ORYSJ Pleckstriny domain-containing protein, pu... 165 9e-40
tr|Q0IXA1|Q0IXA1_ORYSJ Os10g0455900 protein OS=Oryza sativa subs... 165 9e-40
tr|B8BH86|B8BH86_ORYSI Putative uncharacterized protein OS=Oryza... 165 9e-40
tr|A9SMP0|A9SMP0_PHYPA Predicted protein OS=Physcomitrella paten... 159 7e-38
tr|A9TW70|A9TW70_PHYPA Predicted protein OS=Physcomitrella paten... 156 6e-37
tr|Q56W91|Q56W91_ARATH Putative uncharacterized protein At4g1904... 155 7e-37
tr|B3H6R3|B3H6R3_ARATH Uncharacterized protein At4g19040.2 OS=Ar... 155 7e-37
tr|A7QHC7|A7QHC7_VITVI Chromosome chr2 scaffold_97, whole genome... 154 2e-36
tr|Q8VZF6|Q8VZF6_ARATH AT5g45560/MFC19_23 OS=Arabidopsis thalian... 153 4e-36
tr|Q56Y93|Q56Y93_ARATH Putative uncharacterized protein At2g2832... 153 4e-36
tr|Q0WW23|Q0WW23_ARATH Putative uncharacterized protein At2g2832... 153 4e-36
tr|A3C5E1|A3C5E1_ORYSJ Putative uncharacterized protein OS=Oryza... 153 4e-36
tr|A7NZK6|A7NZK6_VITVI Chromosome chr6 scaffold_3, whole genome ... 150 4e-35
tr|B8BHH9|B8BHH9_ORYSI Putative uncharacterized protein OS=Oryza... 149 7e-35
tr|B4FBT3|B4FBT3_MAIZE Putative uncharacterized protein OS=Zea m... 149 9e-35
tr|Q9AV46|Q9AV46_ORYSJ Putative uncharacterized protein OSJNBa00... 148 2e-34
tr|Q7XDB5|Q7XDB5_ORYSJ Pleckstriny domain-containing protein, pu... 148 2e-34
tr|A9TKT1|A9TKT1_PHYPA Predicted protein OS=Physcomitrella paten... 147 2e-34
tr|A9SRL7|A9SRL7_PHYPA Predicted protein (Fragment) OS=Physcomit... 145 8e-34

>tr|Q6Z9J1|Q6Z9J1_ORYSJ Os08g0439100 protein OS=Oryza sativa subsp.
japonica GN=P0524F03.11 PE=2 SV=1
Length = 763

Score = 239 bits (610), Expect = 5e-62
Identities = 113/157 (71%), Positives = 135/157 (85%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G++ M+RGKTYL DY KV GG+PLLKL+AVDWF++D R D+VA + SLVQSEAAKK+PF
Sbjct: 555 GEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPF 614

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNY+LV Y+ A + + K SLL RF+ G+DA+RD+RFKLIP I EGYW V
Sbjct: 615 ILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMV 674

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV
Sbjct: 675 KRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSV 711


>tr|B8BB25|B8BB25_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_29366 PE=4 SV=1
Length = 812

Score = 239 bits (610), Expect = 5e-62
Identities = 113/157 (71%), Positives = 135/157 (85%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G++ M+RGKTYL DY KV GG+PLLKL+AVDWF++D R D+VA + SLVQSEAAKK+PF
Sbjct: 604 GEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPF 663

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNY+LV Y+ A + + K SLL RF+ G+DA+RD+RFKLIP I EGYW V
Sbjct: 664 ILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMV 723

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV
Sbjct: 724 KRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSV 760


>tr|A3BTH9|A3BTH9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_026351 PE=4 SV=1
Length = 876

Score = 239 bits (610), Expect = 5e-62
Identities = 113/157 (71%), Positives = 135/157 (85%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G++ M+RGKTYL DY KV GG+PLLKL+AVDWF++D R D+VA + SLVQSEAAKK+PF
Sbjct: 668 GEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPF 727

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNY+LV Y+ A + + K SLL RF+ G+DA+RD+RFKLIP I EGYW V
Sbjct: 728 ILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMV 787

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV
Sbjct: 788 KRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSV 824


>tr|A7QS07|A7QS07_VITVI Chromosome undetermined scaffold_155, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00005620001 PE=4 SV=1
Length = 351

Score = 228 bits (582), Expect = 9e-59
Identities = 107/157 (68%), Positives = 131/157 (83%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G M+RGKTYL+D KV GG+PLLKL+AVDWF++DN ++ +A + SLVQ EA KKLPF
Sbjct: 141 GAGFMIRGKTYLEDNYKVMGGDPLLKLIAVDWFKADNTMNKIALHPKSLVQCEAGKKLPF 200

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+L+INL++PA PNYSLV Y+ A + + K SLL +FV G+D +RDSRFKLIP I EGYW V
Sbjct: 201 ILIINLEIPAKPNYSLVLYYAADRPVNKNSLLGKFVDGTDMFRDSRFKLIPSIVEGYWMV 260

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSSSV
Sbjct: 261 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSSV 297


>tr|A9TP96|A9TP96_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196926 PE=4 SV=1
Length = 743

Score = 225 bits (573), Expect = 1e-57
Identities = 110/157 (70%), Positives = 128/157 (81%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
GK MVR TY D LK +GG+PLLKLLAVDW +SD R+D VA + VQS+A KK PF
Sbjct: 535 GKGFMVRSVTYNNDGLKTTGGDPLLKLLAVDWLKSDKRIDNVAKRPSCCVQSDAGKKAPF 594

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+L+INLQVPA+PNYSLV YF + + IR+GSLLDRF +G +A+R+SRFKLIP I EGYW V
Sbjct: 595 ILIINLQVPASPNYSLVMYFVSERPIRQGSLLDRFANGDNAFRNSRFKLIPSIVEGYWVV 654

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C Y REDN+LEIDVDIGSSSV
Sbjct: 655 KRAVGTKACLLGKAVTCNYFREDNFLEIDVDIGSSSV 691


>tr|A9SLK4|A9SLK4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_131952 PE=4 SV=1
Length = 743

Score = 225 bits (573), Expect = 1e-57
Identities = 111/157 (70%), Positives = 128/157 (81%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
GK MVRG TY D LK+SGGEPLL LLAVDW +SD+R+D +A + VQS A +K PF
Sbjct: 528 GKGFMVRGVTYNDDNLKISGGEPLLNLLAVDWLKSDHRIDHIALQSSCCVQSVAGRKAPF 587

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNYSLV YF A + I+ GSLLD+F +G DA+R+SRFKLIP I EGYW V
Sbjct: 588 ILVINLQVPAKPNYSLVMYFVADRPIQPGSLLDQFANGDDAFRNSRFKLIPSIVEGYWMV 647

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C YLR+DN+LEIDVDIGSSSV
Sbjct: 648 KRAVGTKACLLGKAVTCNYLRKDNFLEIDVDIGSSSV 684


>tr|Q9LHS2|Q9LHS2_ARATH Emb|CAB77600.1 OS=Arabidopsis thaliana PE=4
SV=1
Length = 767

Score = 221 bits (562), Expect = 2e-56
Identities = 105/157 (66%), Positives = 127/157 (80%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G M+RGKTYLKD KV GG+PLL L++VDWF+ D+ VD +A + L+QSE KKLPF
Sbjct: 557 GMGFMIRGKTYLKDNAKVMGGQPLLTLISVDWFKVDSAVDNIALHPKCLIQSEPGKKLPF 616

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNY LV Y+ A + + K S L +FV GSD+YRD+RFKLIP I +GYW V
Sbjct: 617 ILVINLQVPAKPNYCLVLYYAADRPVNKTSSLGKFVDGSDSYRDARFKLIPSIVQGYWMV 676

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSS+V
Sbjct: 677 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAV 713


>tr|Q8W553|Q8W553_ARATH AT5g35180/T25C13_60 (Putative uncharacterized
protein At5g35180) OS=Arabidopsis thaliana GN=At5g35180
PE=2 SV=1
Length = 778

Score = 221 bits (562), Expect = 2e-56
Identities = 105/157 (66%), Positives = 127/157 (80%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G M+RGKTYLKD KV GG+PLL L++VDWF+ D+ VD +A + L+QSE KKLPF
Sbjct: 568 GMGFMIRGKTYLKDNAKVMGGQPLLTLISVDWFKVDSAVDNIALHPKCLIQSEPGKKLPF 627

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNY LV Y+ A + + K S L +FV GSD+YRD+RFKLIP I +GYW V
Sbjct: 628 ILVINLQVPAKPNYCLVLYYAADRPVNKTSSLGKFVDGSDSYRDARFKLIPSIVQGYWMV 687

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSS+V
Sbjct: 688 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAV 724


>tr|B3H5W6|B3H5W6_ARATH Uncharacterized protein At5g35180.2
OS=Arabidopsis thaliana GN=At5g35180 PE=4 SV=1
Length = 778

Score = 221 bits (562), Expect = 2e-56
Identities = 105/157 (66%), Positives = 127/157 (80%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
G M+RGKTYLKD KV GG+PLL L++VDWF+ D+ VD +A + L+QSE KKLPF
Sbjct: 568 GMGFMIRGKTYLKDNAKVMGGQPLLTLISVDWFKVDSAVDNIALHPKCLIQSEPGKKLPF 627

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQVPA PNY LV Y+ A + + K S L +FV GSD+YRD+RFKLIP I +GYW V
Sbjct: 628 ILVINLQVPAKPNYCLVLYYAADRPVNKTSSLGKFVDGSDSYRDARFKLIPSIVQGYWMV 687

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLGKAV+C+YLR+DN+LEIDVDIGSS+V
Sbjct: 688 KRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAV 724


>tr|A9SZ78|A9SZ78_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_137879 PE=4 SV=1
Length = 730

Score = 214 bits (544), Expect = 2e-54
Identities = 105/157 (66%), Positives = 124/157 (78%)
Frame = +1

Query: 1 GKRVMVRGKTYLKDYLKVSGGEPLLKLLAVDWFQSDNRVDAVASNKNSLVQSEAAKKLPF 180
GK M+R KTY ++ LK+SGG+PLLKL+AVDW +SD R+D +A VQS +K PF
Sbjct: 517 GKGFMIRSKTYDENRLKISGGDPLLKLMAVDWLKSDQRIDQIALQSCCCVQSPVGRKAPF 576

Query: 181 LLVINLQVPATPNYSLVYYFGASKEIRKGSLLDRFVSGSDAYRDSRFKLIPRIAEGYWFV 360
+LVINLQV A P YSLV YF A K I+ GSLLD+F +G DA+R+SRFKLIP I EGYW V
Sbjct: 577 ILVINLQVCAKPKYSLVMYFVADKPIQPGSLLDQFANGDDAFRNSRFKLIPSIVEGYWMV 636

Query: 361 KRAVGTKACLLGKAVSCRYLREDNYLEIDVDIGSSSV 471
KRAVGTKACLLG AV+C YLR+DN+LEIDVDIGSSSV
Sbjct: 637 KRAVGTKACLLGNAVTCNYLRKDNFLEIDVDIGSSSV 673