| BP914941 |
| Clone id |
YMU001_000064_F07 |
| Library |
YMU01 |
| Length |
211 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_F07. |
| Accession |
BP914941 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GATGCGGTCTCATGGAATTCATTAATATCCGCCTATTCTGAACTTGGTTCGGGGGAGGAG
GTGCTCACGTGTCTGGAGAAAATGAGGATGGAAGGCATGCTTCCTAATAGTATAACTCTT
CTGTGTACTTTCCAAGCTCTTAGCATCATGAAAGAAAGGAGCCTCCTTCATTCATTACAC
TCTGAGATTGTGAAGGGGGGCATAGATATGG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O65543 |
| Definition |
sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein At4g31070, mitochondrial OS=Arabidopsis thaliana |
| Align length |
67 |
| Score (bit) |
55.1 |
| E-value |
1.0e-07 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914941|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_F07.
(211 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protei... 55 1e-07
sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protei... 52 9e-07
sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protei... 50 3e-06
sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protei... 49 6e-06
sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containi... 48 2e-05
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protei... 48 2e-05
sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protei... 47 2e-05
sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protei... 47 2e-05
sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protei... 47 3e-05
sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protei... 46 7e-05
sp|O23491|PP315_ARATH Pentatricopeptide repeat-containing protei... 46 7e-05
sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containi... 45 9e-05
sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containi... 45 1e-04
sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protei... 45 1e-04
sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protei... 44 2e-04
sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protei... 44 2e-04
sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protei... 44 2e-04
sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protei... 44 3e-04
sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protei... 44 3e-04
sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protei... 44 3e-04
sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protei... 44 3e-04
sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protei... 43 4e-04
sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protei... 43 4e-04
sp|Q0WNP3|PP319_ARATH Pentatricopeptide repeat-containing protei... 43 4e-04
sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protei... 43 4e-04
sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containi... 43 4e-04
sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containi... 43 4e-04
sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protei... 43 6e-04
>sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein
At4g31070, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E7 PE=2 SV=2
Length = 624
Score = 55.1 bits (131), Expect = 1e-07
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V W+S+IS Y+E G EV+ L +MR EG+ NS+TLL A + S ++H
Sbjct: 328 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 387
Query: 181 SEIVKGG 201
S+I+K G
Sbjct: 388 SQILKCG 394
Score = 29.6 bits (65), Expect = 4.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQA 138
D VSW+S+I+AY G G E L + M G + + L A
Sbjct: 429 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSA 474
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein
At4g04370 OS=Arabidopsis thaliana GN=PCMP-E99 PE=2 SV=1
Length = 729
Score = 52.0 bits (123), Expect = 9e-07
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D VSWN++IS Y+ +G+ E+L L +MR +G+ P+ T + M + + LH
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 181 SEIVKGGIDM 210
+IVK G D+
Sbjct: 269 CQIVKTGFDV 278
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V W ++I YS G E + + +MR +G+ P +TLL + LS + E + L LH
Sbjct: 111 DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLL---EMLSGVLEITQLQCLH 167
Query: 181 SEIVKGGID 207
V G D
Sbjct: 168 DFAVIYGFD 176
Score = 32.3 bits (72), Expect = 0.75
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D VSW LI+ Y G G+ L + GM PN + L + S
Sbjct: 513 DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Score = 30.0 bits (66), Expect = 3.7
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 13 WNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHSEIV 192
+NS I+ S G ++VL+ M +LP++ T +A + ++ S S+H +++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 193 KGG 201
G
Sbjct: 74 VNG 76
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E1 PE=2 SV=1
Length = 654
Score = 50.1 bits (118), Expect = 3e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
DA +WN+++S + + G ++ + +MR+ + P+S+T++ Q+ S K LL ++H
Sbjct: 117 DATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMH 176
Query: 181 SEIVKGGIDM 210
+ ++ G+D+
Sbjct: 177 AVGIRLGVDV 186
Score = 33.5 bits (75), Expect = 0.34
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLL 123
VSW +IS Y+E G +E L M G P+ +TLL
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E47 PE=2 SV=1
Length = 689
Score = 49.3 bits (116), Expect = 6e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V+WNS+IS +S+ GS E L +M E + PN +T+ F A + + ++ SLH
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 181 SEIVKGG 201
+ VK G
Sbjct: 467 AYSVKLG 473
Score = 41.2 bits (95), Expect = 0.002
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V W ++I Y+ GS E L+ +KM+ + PN +T+ +++ L S+H
Sbjct: 307 DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVH 366
Query: 181 SEIVKGGI 204
+K GI
Sbjct: 367 GLSIKVGI 374
Score = 30.8 bits (68), Expect = 2.2
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHS-- 174
+ V W S+I+ Y + EE L +MR +L N T A + + S LH
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT---KLSALHQGK 262
Query: 175 -LHSEIVKGGIDM 210
H +VK GI++
Sbjct: 263 WFHGCLVKSGIEL 275
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing
protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35
PE=3 SV=1
Length = 995
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D+VSWNS+I+ + G E + + MR +LP S TL+ + + + +K L +H
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 181 SEIVKGGIDM 210
E +K GID+
Sbjct: 439 GESLKLGIDL 448
Score = 40.4 bits (93), Expect = 0.003
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGML-PNSITLLCTFQALS 144
++ SWNS+IS Y+ G GEE L E M+++G P+ +T + A S
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS 732
Score = 35.0 bits (79), Expect = 0.12
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITL--LCTFQALSIMKERSLLHS 174
++VSWNS+IS YS+ G M+ +G P T L T + LL
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 175 LHSEIVKGGI 204
+ I K G+
Sbjct: 230 IMCTIQKSGL 239
Score = 32.0 bits (71), Expect = 0.98
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQA 138
+ VSW ++S YS G +E L L M EG+ N + +A
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRA 111
Score = 30.8 bits (68), Expect = 2.2
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 DAVSWNSLISAYSEL-GSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSL 177
D VSWNS+I A + S E + C + G N IT A+S + L +
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Query: 178 HSEIVKGGI 204
H +K I
Sbjct: 540 HGLALKNNI 548
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein
At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D V WNS+IS+Y+ G G++ L LEKM EG+ PN IT + A S
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Score = 33.5 bits (75), Expect = 0.34
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V WNS+ + Y + EE L ++++ P+ T A + L H
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 181 SEIVKGGID 207
+++K G++
Sbjct: 579 CQLLKRGLE 587
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-H87 PE=2 SV=1
Length = 633
Score = 47.4 bits (111), Expect = 2e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D VSWNSL++AY++ G G+E + E+MR G+ PN I+ L A S
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V+W +LIS YS+ + L +M G PN TL +A + + H LH
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 181 SEIVKGGID 207
VK G D
Sbjct: 185 GFCVKCGFD 193
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein
At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1
Length = 727
Score = 47.4 bits (111), Expect = 2e-05
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 1 DAVSWNSLISAYSELG---SGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLH 171
D VSWNSLI+ YS+ G S V+ +MR + +LPN+ TL F+A S ++ ++
Sbjct: 79 DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138
Query: 172 SLHSEIVK 195
H+ +VK
Sbjct: 139 QAHALVVK 146
Score = 44.7 bits (104), Expect = 1e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D VSWN++IS S G G+E L E+M EGM P+ +T + A S
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Score = 43.5 bits (101), Expect = 3e-04
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D W SLIS Y + EE L +M+ G++PN T+ +A S + L +H
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 181 SEIVKGGIDM 210
+K G +
Sbjct: 447 GHTIKHGFGL 456
Score = 33.9 bits (76), Expect = 0.26
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
++++W+++++ YS+ G E + +M G+ P+ T++ A S + LH
Sbjct: 286 NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLH 345
Query: 181 SEIVKGGID 207
S ++K G +
Sbjct: 346 SFLLKLGFE 354
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein
At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 47.0 bits (110), Expect = 3e-05
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
DAV WNS++S+YS G E L +M M G PNS T++ A L +H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 181 SEIVK 195
+ ++K
Sbjct: 308 ASVLK 312
Score = 37.0 bits (84), Expect = 0.030
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D VSW S+IS+ + G+ E + +M G+ +S+ LLC A + + + +H
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 181 SEIVKGG 201
+++ G
Sbjct: 611 CYLLRKG 617
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
+ + S+I+AY G G+ + +KMR E + P+ I+ L A S
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Score = 31.2 bits (69), Expect = 1.7
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 4 AVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHS 183
A +WN++I AY G L MR+EG+ + +A + +++ LHS
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHS 206
Query: 184 EIVKGG 201
+VK G
Sbjct: 207 LLVKLG 212
Score = 29.6 bits (65), Expect = 4.9
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V+WNSLI Y + +E L M G + +++ A + LH
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 181 SEIVKGGID 207
+ ++K G D
Sbjct: 410 AYVIKHGWD 418
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-H69 PE=2 SV=1
Length = 704
Score = 45.8 bits (107), Expect = 7e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D + WNS+IS Y+ G GEE L +M G +PN +TL+ A S
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8B274 |
| Definition |
tr|B8B274|B8B274_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
| Align length |
70 |
| Score (bit) |
55.1 |
| E-value |
2.0e-06 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914941|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_F07.
(211 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B8B274|B8B274_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|Q84KA5|Q84KA5_CUCME Selenium binding protein-like protein OS=... 53 9e-06
tr|A7PM57|A7PM57_VITVI Chromosome chr14 scaffold_21, whole genom... 53 9e-06
tr|A5BSN6|A5BSN6_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06
tr|A3BF76|A3BF76_ORYSJ Putative uncharacterized protein OS=Oryza... 53 9e-06
tr|Q84M45|Q84M45_ORYSJ Putative pentatricopeptide repeat contain... 52 2e-05
tr|Q10BR5|Q10BR5_ORYSJ Calreticulin family protein, expressed (P... 52 2e-05
tr|B8ALT6|B8ALT6_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05
tr|B8LKN6|B8LKN6_PICSI Putative uncharacterized protein OS=Picea... 51 3e-05
tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ... 50 6e-05
tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella paten... 50 6e-05
tr|A7PSX6|A7PSX6_VITVI Chromosome chr8 scaffold_29, whole genome... 50 7e-05
tr|A5BSF7|A5BSF7_VITVI Putative uncharacterized protein OS=Vitis... 50 7e-05
tr|Q6YUT6|Q6YUT6_ORYSJ Putative pentatricopeptide (PPR) repeat-c... 49 1e-04
tr|Q0E369|Q0E369_ORYSJ Os02g0191200 protein OS=Oryza sativa subs... 49 1e-04
tr|A7QUJ9|A7QUJ9_VITVI Chromosome chr10 scaffold_179, whole geno... 49 1e-04
tr|A7NY46|A7NY46_VITVI Chromosome chr6 scaffold_3, whole genome ... 49 1e-04
tr|A3A409|A3A409_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|A7PD11|A7PD11_VITVI Chromosome chr17 scaffold_12, whole genom... 49 1e-04
tr|A5BIY5|A5BIY5_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04
tr|A5AY98|A5AY98_VITVI Putative uncharacterized protein (Chromos... 49 1e-04
tr|A7PL31|A7PL31_VITVI Chromosome chr7 scaffold_20, whole genome... 49 2e-04
tr|A7NVQ9|A7NVQ9_VITVI Chromosome chr18 scaffold_1, whole genome... 49 2e-04
tr|A5AJZ0|A5AJZ0_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04
tr|A7R0F5|A7R0F5_VITVI Chromosome undetermined scaffold_306, who... 48 2e-04
tr|A7PZU2|A7PZU2_VITVI Chromosome chr15 scaffold_40, whole genom... 48 2e-04
tr|A5AR37|A5AR37_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04
tr|Q5W965|Q5W965_PHYPA PPR868-14 OS=Physcomitrella patens PE=2 SV=1 48 3e-04
tr|Q2QYL5|Q2QYL5_ORYSJ Pentatricopeptide, putative, expressed (P... 48 3e-04
tr|Q0IQL3|Q0IQL3_ORYSJ Os12g0114400 protein (Fragment) OS=Oryza ... 48 3e-04
>tr|B8B274|B8B274_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_24392 PE=4 SV=1
Length = 1349
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D +SW SLI+AYS +E + C + M EG+ P+ +T++ A S +K+ L SLH
Sbjct: 204 DVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLH 263
Query: 181 SEIVKGGIDM 210
S + + G+ M
Sbjct: 264 SLVKEKGMSM 273
Score = 36.2 bits (82), Expect = 0.86
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 16 NSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSL--LHSLHSEI 189
NSLI++ + L L M +EG+ P+ +T T +A+S+ SL LHS +
Sbjct: 1068 NSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCL 1127
Query: 190 VKGGIDM 210
VK G +M
Sbjct: 1128 VKLGFEM 1134
Score = 35.0 bits (79), Expect = 1.9
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D +SWNS++S Y++ G +E + L++M G +P SI + ALS
Sbjct: 961 DVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMP-SIRSFVSLLALS 1007
>tr|Q84KA5|Q84KA5_CUCME Selenium binding protein-like protein
OS=Cucumis melo GN=Sbp1 PE=4 SV=1
Length = 565
Score = 52.8 bits (125), Expect = 9e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHSE 186
V WNS+ISA+S+ G G E L M + G +PN T L +A + ++ RS SLH+
Sbjct: 280 VVWNSMISAFSQYGRGAEALRLFVDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHAR 339
Query: 187 IVK 195
++K
Sbjct: 340 VLK 342
Score = 34.7 bits (78), Expect = 2.5
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 13 WNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHSEIV 192
WNS+I Y G L E+M+ +G P+ T + S + S+H+ IV
Sbjct: 73 WNSMIKGYCNGGDKFGALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYGQSVHNRIV 132
Query: 193 KGGIDM 210
K G ++
Sbjct: 133 KTGFEL 138
>tr|A7PM57|A7PM57_VITVI Chromosome chr14 scaffold_21, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020692001
PE=4 SV=1
Length = 728
Score = 52.8 bits (125), Expect = 9e-06
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHSE 186
+SW+++I+ YS+ G EE L KM EG PN CT AL+ ++ S ++H
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGH 341
Query: 187 IVKGGID 207
+ K GID
Sbjct: 342 VTKIGID 348
Score = 34.3 bits (77), Expect = 3.3
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHSE 186
VSW ++I+ Y E E+VL + + G PN T A + + ++H +
Sbjct: 414 VSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGK 473
Query: 187 IVKGGI 204
I+K GI
Sbjct: 474 IIKLGI 479
>tr|A5BSN6|A5BSN6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001173 PE=4 SV=1
Length = 728
Score = 52.8 bits (125), Expect = 9e-06
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLHSE 186
+SW+++I+ YS+ G EE L KM EG PN CT AL+ ++ S ++H
Sbjct: 282 ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGH 341
Query: 187 IVKGGID 207
+ K GID
Sbjct: 342 VTKIGID 348
>tr|A3BF76|A3BF76_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_021698 PE=4 SV=1
Length = 1685
Score = 52.8 bits (125), Expect = 9e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D +SW SLI+AYS +E + C + M EG+ P+ +T++ A S +K+ L SLH
Sbjct: 142 DVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLH 201
Query: 181 SEIVKGGIDM 210
+ + G+ M
Sbjct: 202 LLVKEKGMSM 211
Score = 35.4 bits (80), Expect = 1.5
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 16 NSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSL--LHSLHSEI 189
NSLI++ + L L M +EG+ P+ +T T +A+S+ SL LHS +
Sbjct: 1006 NSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCL 1065
Query: 190 VKGGIDM 210
VK G +M
Sbjct: 1066 VKLGFEM 1072
Score = 34.7 bits (78), Expect = 2.5
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS 144
D +SWNS++S Y++ G +E + L++M G +P S+ + ALS
Sbjct: 899 DVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMP-SVRSFVSLLALS 945
>tr|Q84M45|Q84M45_ORYSJ Putative pentatricopeptide repeat containing
protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0059E14.12 PE=4 SV=1
Length = 859
Score = 52.0 bits (123), Expect = 2e-05
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V+W SL+S + + +E L C +MR+ G+ PN +++ C A + +K + LH
Sbjct: 286 DVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKELH 345
Query: 181 SEIVKGG 201
S +K G
Sbjct: 346 SHAIKVG 352
Score = 39.3 bits (90), Expect = 0.10
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D ++W+++I AY+ G +VL M EG+LP+ + QA + ++ L +LH
Sbjct: 112 DLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALH 171
Query: 181 SEIVKGG 201
S ++ G
Sbjct: 172 SMAIRRG 178
Score = 34.7 bits (78), Expect = 2.5
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSI 147
+SWN +I A+ GS E L +M+ EG++P+ TL+ +A +
Sbjct: 560 ISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGL 606
>tr|Q10BR5|Q10BR5_ORYSJ Calreticulin family protein, expressed
(Putative uncharacterized protein) OS=Oryza sativa
subsp. japonica GN=LOC_Os03g59264 PE=4 SV=1
Length = 1111
Score = 52.0 bits (123), Expect = 2e-05
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V+W SL+S + + +E L C +MR+ G+ PN +++ C A + +K + LH
Sbjct: 286 DVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKELH 345
Query: 181 SEIVKGG 201
S +K G
Sbjct: 346 SHAIKVG 352
Score = 39.3 bits (90), Expect = 0.10
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D ++W+++I AY+ G +VL M EG+LP+ + QA + ++ L +LH
Sbjct: 112 DLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALH 171
Query: 181 SEIVKGG 201
S ++ G
Sbjct: 172 SMAIRRG 178
Score = 34.7 bits (78), Expect = 2.5
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSI 147
+SWN +I A+ GS E L +M+ EG++P+ TL+ +A +
Sbjct: 560 ISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGL 606
>tr|B8ALT6|B8ALT6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13992 PE=4 SV=1
Length = 822
Score = 52.0 bits (123), Expect = 2e-05
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V+W SL+S + + +E L C +MR+ G+ PN +++ C A + +K + LH
Sbjct: 249 DVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKELH 308
Query: 181 SEIVKGG 201
S +K G
Sbjct: 309 SHAIKVG 315
Score = 39.3 bits (90), Expect = 0.10
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D ++W+++I AY+ G +VL M EG+LP+ + QA + ++ L +LH
Sbjct: 75 DLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALH 134
Query: 181 SEIVKGG 201
S ++ G
Sbjct: 135 SMAIRRG 141
Score = 34.7 bits (78), Expect = 2.5
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 7 VSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSI 147
+SWN +I A+ GS E L +M+ EG++P+ TL+ +A +
Sbjct: 523 ISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGL 569
>tr|B8LKN6|B8LKN6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 394
Score = 50.8 bits (120), Expect = 3e-05
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITL---LCTFQALSIMKERSLLH 171
D ++WN+LI+AY++ G G++ L ++M++ G+ PNSIT+ L A+S ++E +H
Sbjct: 314 DVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIH 373
Query: 172 SL 177
L
Sbjct: 374 DL 375
>tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2
SV=2
Length = 1106
Score = 50.1 bits (118), Expect = 6e-05
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D +SWNSLIS Y++ G ++ E+M+ G +PN IT + A E +H
Sbjct: 92 DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIH 151
Query: 181 SEIVKGG 201
S+I+K G
Sbjct: 152 SQIIKAG 158
Score = 40.0 bits (92), Expect = 0.059
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D +SWNS+I+ +++ GS E ++M+ E + P++IT + L +H
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 181 SEIVKGGIDM 210
I + G+ +
Sbjct: 556 GRITESGLQL 565
Score = 40.0 bits (92), Expect = 0.059
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D VSWN +I+ Y++ G G+ + +M+ + ++PN + + A S +H
Sbjct: 698 DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVH 757
Query: 181 SEIVK 195
+EIVK
Sbjct: 758 AEIVK 762
Score = 38.9 bits (89), Expect = 0.13
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D +SWN++I+ Y+ E + ++M+ EG+ P +T L A + + +H
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIH 454
Query: 181 SEIVKGGI 204
+I++ GI
Sbjct: 455 EDILRSGI 462
Score = 34.7 bits (78), Expect = 2.5
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSIT---LLCTFQALSIMKERSLLH 171
D VS+N+++ Y++ +E L +M EG+ P+ +T LL F S++ E +H
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH 252
Query: 172 SLHSE 186
L E
Sbjct: 253 KLTVE 257
Score = 34.3 bits (77), Expect = 3.3
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALSIMKERSLLHSLH 180
D V +N+LI+A ++ G E +MR +G+ N T L A S K +H
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 181 SEIVKGG 201
S I + G
Sbjct: 354 SHISEDG 360
Score = 32.7 bits (73), Expect = 9.5
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 DAVSWNSLISAYSELGSGEEVLTCLEKMRMEGMLPNSITLLCTFQALS----IMKERSLL 168
+ V+WN++I+AY++ G + L M EG+ P+ T A + +++ +
Sbjct: 799 NVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIF 858
Query: 169 HSLHSE 186
S+ SE
Sbjct: 859 SSMESE 864
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