BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914948|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_G03.
         (547 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P81128|GRLF1_RAT Glucocorticoid receptor DNA-binding factor 1...    32   2.6  
sp|Q91YM2|GRLF1_MOUSE Glucocorticoid receptor DNA-binding factor...    32   2.6  
sp|Q9NRY4|GRLF1_HUMAN Glucocorticoid receptor DNA-binding factor...    32   2.6  
sp|P83509|GRLF1_CANFA Glucocorticoid receptor DNA-binding factor...    32   2.6  
sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5...    30   7.6  
sp|Q6UY61|L_SABVB RNA-directed RNA polymerase OS=Sabia virus (is...    30   7.7  

>sp|P81128|GRLF1_RAT Glucocorticoid receptor DNA-binding factor 1
           OS=Rattus norvegicus GN=Grlf1 PE=1 SV=2
          Length = 1513

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -1

Query: 544 TQMERSECWF--ACQCTSYVR*RRCDVHLRHPNLLWADDLKYRVHVESTLRNIHIIHW 377
           T+ E+ +C    +C C  +VR    + HL H ++L   D   RV     + N H ++W
Sbjct: 24  TEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRV-----VNNDHFLYW 76


>sp|Q91YM2|GRLF1_MOUSE Glucocorticoid receptor DNA-binding factor 1
           OS=Mus musculus GN=Grlf1 PE=1 SV=3
          Length = 1499

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -1

Query: 544 TQMERSECWF--ACQCTSYVR*RRCDVHLRHPNLLWADDLKYRVHVESTLRNIHIIHW 377
           T+ E+ +C    +C C  +VR    + HL H ++L   D   RV     + N H ++W
Sbjct: 24  TEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRV-----VNNDHFLYW 76


>sp|Q9NRY4|GRLF1_HUMAN Glucocorticoid receptor DNA-binding factor 1
           OS=Homo sapiens GN=GRLF1 PE=1 SV=2
          Length = 1513

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -1

Query: 544 TQMERSECWF--ACQCTSYVR*RRCDVHLRHPNLLWADDLKYRVHVESTLRNIHIIHW 377
           T+ E+ +C    +C C  +VR    + HL H ++L   D   RV     + N H ++W
Sbjct: 24  TEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRV-----VNNDHFLYW 76


>sp|P83509|GRLF1_CANFA Glucocorticoid receptor DNA-binding factor 1
           OS=Canis familiaris GN=GRLF1 PE=2 SV=1
          Length = 1500

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -1

Query: 544 TQMERSECWF--ACQCTSYVR*RRCDVHLRHPNLLWADDLKYRVHVESTLRNIHIIHW 377
           T+ E+ +C    +C C  +VR    + HL H ++L   D   RV     + N H ++W
Sbjct: 24  TEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRV-----VNNDHFLYW 76


>sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5
            OS=Mus musculus GN=Abca5 PE=1 SV=2
          Length = 1642

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +3

Query: 228  CCA*PXXXXAGCF*VFFILFQYSRWMDGESPYSHHDDIMPAYLMLVYNQYQCMIWIFL 401
            C A P     GC  + FI   +      E+ Y+  D ++ A +M      QC++WIFL
Sbjct: 1171 CIAIPIYPLLGCL-ISFIKGSWKNMPKNENTYNPWDRLLVAVIM---PYLQCILWIFL 1224


>sp|Q6UY61|L_SABVB RNA-directed RNA polymerase OS=Sabia virus (isolate
            Human/Brasil/SPH114202/1990) GN=L PE=3 SV=1
          Length = 2212

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 466  LRHPNLLWADDLKYRVHVESTLRNIHIIH 380
            L +PNL WA   K + H+E  L   HI+H
Sbjct: 1712 LSNPNLFWAVKPKIQKHIEDRLSLNHILH 1740

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914948|Adiantum capillus-veneris mRNA, clone:
YMU001_000064_G03.
         (547 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2S142|B2S142_BORHD Putative uncharacterized protein OS=Borre...    35   2.6  

>tr|B2S142|B2S142_BORHD Putative uncharacterized protein OS=Borrelia
           hermsii (strain DAH) GN=BH0699A PE=4 SV=1
          Length = 276

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 19/60 (31%), Positives = 34/60 (56%)
 Frame = +1

Query: 121 MYKFSFMLILSQHKVITCQSYLTSLHNRLKT*GC*IAVHDLLAKVLDVFKSSLFCFNTLD 300
           +YK+SF+  L++ + I C+   +  + +L+     I     L+K++   KSSLFC+N  D
Sbjct: 195 VYKWSFVYFLNEQEKIICEINNSGSNFKLR-----IYADFSLSKIIRELKSSLFCYNVTD 249