BP914950 |
Clone id |
YMU001_000064_G06 |
Library |
YMU01 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_G06. |
Accession |
BP914950 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1252Contig1 |
Sequence |
GAGTACCTGCGCAAAGTCAGTGCATGCCAGTCGTGACCTACAACCACTTCTGTATAAAAG TGTGGTATTGACAGGTGGAACAACAAAGTTGCCAGGTTTCAAGGAAAGACTAGAGTTGGA GCTTCGTCCGATGGTTCCAGCTGAATATGATCTGAAAGTACACGCCCTGGACAACCCGAT TGTTGCACCGTGGCGGGGTGGATCTCTCTTTGCTTCAAGTGAAGAATTTGAGAGCTGCTC AATAACTAAAGGTGAATACGAGGAATTGGGTTCCCTCCGGTGCAGACGAAGGTTTATGCG TTGTCAGAGTCTTATCACAACTGTCTGATTGAATACCCTTATTAGGTGCATACCTTCTTT GATAAGTTTAGGTATCCTCAAACTACATATTCAAGGGCAACCTGCAAATTTCCTAGTGCA GGTTTTAAAAGCCGGCATGCGTTGAAGTTGAGTCTTATCTATTTGATTGTTGCTAGCAGG ATTGCTCACAAAATGGCAGCATTTTGGACATGCCAACAAAAATGGTGATATTAAAGTCCC TGCTGTAGCTTGAATACAATGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LGE3 |
Definition |
sp|Q8LGE3|ARP6_ARATH Actin-related protein 6 OS=Arabidopsis thaliana |
Align length |
86 |
Score (bit) |
117.0 |
E-value |
4.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PH83 |
Definition |
tr|A9PH83|A9PH83_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
86 |
Score (bit) |
117.0 |
E-value |
3.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914950|Adiantum capillus-veneris mRNA, clone: YMU001_000064_G06. (563 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PH83|A9PH83_POPTR Putative uncharacterized protein OS=Popul... 117 3e-25 tr|Q287V0|Q287V0_CARAS Actin-related protein 6 OS=Cardaminopsis ... 117 4e-25 tr|B6TWX2|B6TWX2_MAIZE Actin-like protein arp6 OS=Zea mays PE=2 ... 116 7e-25 tr|A7PF62|A7PF62_VITVI Chromosome chr11 scaffold_13, whole genom... 116 7e-25 tr|Q287V5|Q287V5_9BRAS Actin-related protein 6 OS=Capsella rubel... 115 2e-24 tr|Q287X0|Q287X0_OLIPU Actin-related protein 6 OS=Olimarabidopsi... 115 2e-24 tr|B5B3X5|B5B3X5_PHYPA Actin-related protein 6 OS=Physcomitrella... 105 2e-21 tr|Q7ZV86|Q7ZV86_DANRE ARP6 actin-related protein 6 homolog (Yea... 89 2e-16 tr|Q28HE6|Q28HE6_XENTR ARP6 actin-related protein 6 homolog OS=X... 86 2e-15 tr|A2VDB7|A2VDB7_XENLA LOC100037212 protein OS=Xenopus laevis GN... 84 4e-15 tr|Q4TBH5|Q4TBH5_TETNG Chromosome 13 SCAF7124, whole genome shot... 84 5e-15 tr|B2RYQ1|B2RYQ1_RAT ARP6 actin-related protein 6 homolog (Yeast... 84 7e-15 tr|A6H7G6|A6H7G6_BOVIN ACTR6 protein OS=Bos taurus GN=ACTR6 PE=2... 82 2e-14 tr|Q7Z4D2|Q7Z4D2_HUMAN MSTP136 OS=Homo sapiens PE=2 SV=1 82 2e-14 tr|Q53GH2|Q53GH2_HUMAN ARP6 actin-related protein 6 homolog (Fra... 82 2e-14 tr|B3KW37|B3KW37_HUMAN cDNA FLJ42081 fis, clone TBAES2000004, hi... 82 2e-14 tr|B3SC04|B3SC04_TRIAD Putative uncharacterized protein OS=Trich... 80 8e-14 tr|A7SYR0|A7SYR0_NEMVE Predicted protein OS=Nematostella vectens... 78 4e-13 tr|Q54KZ7|Q54KZ7_DICDI Actin related protein 6 OS=Dictyostelium ... 76 1e-12 tr|B6LXB5|B6LXB5_BRAFL Putative uncharacterized protein OS=Branc... 75 2e-12 tr|B6PKG5|B6PKG5_BRAFL Putative uncharacterized protein OS=Branc... 74 5e-12 tr|Q6WMS6|Q6WMS6_BRABE Actin-related protein 6 OS=Branchiostoma ... 72 2e-11 tr|Q4UGT7|Q4UGT7_THEAN Actin-related protein, putative OS=Theile... 72 3e-11 tr|Q9XZB9|Q9XZB9_OXYNO Actin OS=Oxytricha nova PE=3 SV=1 71 5e-11 tr|Q4N8V8|Q4N8V8_THEPA Putative uncharacterized protein OS=Theil... 68 3e-10 tr|B6N5D9|B6N5D9_BRAFL Putative uncharacterized protein OS=Branc... 67 7e-10 tr|B0DKF0|B0DKF0_LACBS Actin-1 OS=Laccaria bicolor (strain S238N... 67 7e-10 tr|B4ZFL1|B4ZFL1_AMPCA Actin (Fragment) OS=Amphidinium carterae ... 67 9e-10 tr|Q597G0|Q597G0_9EUKA Actin (Fragment) OS=Stephanopogon colpoda... 67 9e-10 tr|B2WF82|B2WF82_PYRTR Actin OS=Pyrenophora tritici-repentis (st... 67 9e-10
>tr|A9PH83|A9PH83_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 424
Score = 117 bits (294), Expect = 3e-25 Identities = 53/86 (61%), Positives = 68/86 (79%) Frame = +2
Query: 38 LQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFAS 217 L PLLY+S++LTGG+T P F ERLE+ELRP+VP +Y +K+ ++PI+ WRGGSL AS Sbjct: 337 LHPLLYQSIILTGGSTLFPRFAERLEMELRPLVPDDYQVKITTQEDPILGVWRGGSLLAS 396
Query: 218 SEEFESCSITKGEYEELGSLRCRRRF 295 S +FE+ +TK EYEELGS RCRRRF Sbjct: 397 SPDFEAMCVTKAEYEELGSARCRRRF 422
>tr|Q287V0|Q287V0_CARAS Actin-related protein 6 OS=Cardaminopsis arenosa GN=Aa_33520 PE=3 SV=1 Length = 420
Score = 117 bits (293), Expect = 4e-25 Identities = 54/86 (62%), Positives = 68/86 (79%) Frame = +2
Query: 38 LQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFAS 217 LQP+LY+S++LTGG+T P KERLE ELRP+VP +D+K+ ++PI+ WRGGSL AS Sbjct: 333 LQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLAS 392
Query: 218 SEEFESCSITKGEYEELGSLRCRRRF 295 S +FES +TK EYEELGS RCRRRF Sbjct: 393 SPDFESMCVTKAEYEELGSARCRRRF 418
>tr|B6TWX2|B6TWX2_MAIZE Actin-like protein arp6 OS=Zea mays PE=2 SV=1 Length = 455
Score = 116 bits (291), Expect = 7e-25 Identities = 53/94 (56%), Positives = 70/94 (74%) Frame = +2
Query: 38 LQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFAS 217 LQP+L++S++LTGG+T P F ERLE ELRP+VP +Y +K+ +NPI WRGGS+ AS Sbjct: 343 LQPVLFESIILTGGSTLFPRFTERLERELRPLVPDDYKVKITRQENPIFGVWRGGSILAS 402
Query: 218 SEEFESCSITKGEYEELGSLRCRRRFMRCQSLIT 319 S +FES ITK EYEE+GS RCRRRF +++ Sbjct: 403 SPDFESMCITKSEYEEMGSARCRRRFFSLNRILS 436
>tr|A7PF62|A7PF62_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016923001 PE=3 SV=1 Length = 426
Score = 116 bits (291), Expect = 7e-25 Identities = 51/87 (58%), Positives = 69/87 (79%) Frame = +2
Query: 35 DLQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFA 214 DL P+LY+S++LTGG+T P F +RLE+ELRP+VP +Y +K+ ++PI+ WRGGSL A Sbjct: 338 DLHPVLYQSIILTGGSTLFPQFAQRLEMELRPLVPDDYQVKITTQEDPILGVWRGGSLLA 397
Query: 215 SSEEFESCSITKGEYEELGSLRCRRRF 295 SS +FE+ +TK EYEELGS RCR+RF Sbjct: 398 SSPDFEAMCVTKSEYEELGSARCRKRF 424
>tr|Q287V5|Q287V5_9BRAS Actin-related protein 6 OS=Capsella rubella GN=Cr_33520 PE=3 SV=1 Length = 423
Score = 115 bits (288), Expect = 2e-24 Identities = 53/86 (61%), Positives = 68/86 (79%) Frame = +2
Query: 38 LQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFAS 217 LQP+LY+S++LTGG+T P K+RLE ELRP+VP +D+K+ ++PI+ WRGGSL AS Sbjct: 336 LQPVLYQSIILTGGSTLFPQLKDRLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLAS 395
Query: 218 SEEFESCSITKGEYEELGSLRCRRRF 295 S +FES +TK EYEELGS RCRRRF Sbjct: 396 SPDFESMCVTKTEYEELGSARCRRRF 421
>tr|Q287X0|Q287X0_OLIPU Actin-related protein 6 OS=Olimarabidopsis pumila GN=Op_33520 PE=3 SV=1 Length = 423
Score = 115 bits (287), Expect = 2e-24 Identities = 53/86 (61%), Positives = 67/86 (77%) Frame = +2
Query: 38 LQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFAS 217 LQP+LY+S++LTGG+T P KERLE ELRP+VP +D+K+ ++PI+ WRGGSL AS Sbjct: 336 LQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLAS 395
Query: 218 SEEFESCSITKGEYEELGSLRCRRRF 295 S +FES +TK EYEEL S RCRRRF Sbjct: 396 SPDFESICVTKAEYEELASARCRRRF 421
>tr|B5B3X5|B5B3X5_PHYPA Actin-related protein 6 OS=Physcomitrella patens GN=ARP6 PE=2 SV=1 Length = 446
Score = 105 bits (262), Expect = 2e-21 Identities = 48/89 (53%), Positives = 67/89 (75%) Frame = +2
Query: 35 DLQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFA 214 +L LLY+SV+LTGG T LPGFK RLE ELRP+V ++++ + +D PI+A W+G SL A Sbjct: 358 ELHALLYQSVLLTGGNTLLPGFKNRLEHELRPLVTDDFNINIEIVDCPILAAWKGASLMA 417
Query: 215 SSEEFESCSITKGEYEELGSLRCRRRFMR 301 + EF + ++TK EYEE G+LRCR+RF + Sbjct: 418 ARPEFHTWAVTKAEYEEDGTLRCRQRFQK 446
>tr|Q7ZV86|Q7ZV86_DANRE ARP6 actin-related protein 6 homolog (Yeast) OS=Danio rerio GN=actr6 PE=2 SV=1 Length = 396
Score = 88.6 bits (218), Expect = 2e-16 Identities = 38/87 (43%), Positives = 56/87 (64%) Frame = +2
Query: 35 DLQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFA 214 ++QP YK++VLTGG T PGF++R+ E+R + P EYD+ V +NPI W GG L A Sbjct: 308 EMQPHFYKNIVLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLA 367
Query: 215 SSEEFESCSITKGEYEELGSLRCRRRF 295 + +FE ++T+ +YEE G C +F Sbjct: 368 ENPDFEEMAVTRDDYEENGHYICEEKF 394
>tr|Q28HE6|Q28HE6_XENTR ARP6 actin-related protein 6 homolog OS=Xenopus tropicalis GN=actr6 PE=2 SV=1 Length = 396
Score = 85.5 bits (210), Expect = 2e-15 Identities = 35/87 (40%), Positives = 57/87 (65%) Frame = +2
Query: 35 DLQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFA 214 ++QP YK++VLTGG T PGF+ER+ E+R + P ++D+ V +NPI W GG + + Sbjct: 308 EMQPHFYKNIVLTGGNTLFPGFRERVFSEVRKLTPTDFDVSVILPENPISYAWEGGKIIS 367
Query: 215 SSEEFESCSITKGEYEELGSLRCRRRF 295 +++FE +T+ +YEE G + C +F Sbjct: 368 ENDDFEDMVVTREDYEENGHIICEEKF 394
>tr|A2VDB7|A2VDB7_XENLA LOC100037212 protein OS=Xenopus laevis GN=actr6 PE=2 SV=1 Length = 396
Score = 84.3 bits (207), Expect = 4e-15 Identities = 35/87 (40%), Positives = 56/87 (64%) Frame = +2
Query: 35 DLQPLLYKSVVLTGGTTKLPGFKERLELELRPMVPAEYDLKVHALDNPIVAPWRGGSLFA 214 ++QP YK++VLTGG T PGF+ER+ E+R + P ++D+ V +NPI W GG + + Sbjct: 308 EMQPHFYKNIVLTGGNTLFPGFRERVFSEVRKLTPTDFDVSVILPENPISYSWEGGKIIS 367
Query: 215 SSEEFESCSITKGEYEELGSLRCRRRF 295 +++FE +T+ +YEE G C +F Sbjct: 368 ENDDFEDMVVTREDYEENGHAICEEKF 394
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