BP914962 |
Clone id |
YMU001_000064_H08 |
Library |
YMU01 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000064_H08. |
Accession |
BP914962 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATGGAGATGATGGCACCTTATGGAAGGAAGTTGGTGATGAAGTTCGTAGGGATGCAGAA AGGTTGTTCAAAATAATAGGGGAGTCTTATGCCATCTTGTCTGATCCCGTAAAGCGGGCT CAGTATGATATAGAGTACCAAATTTCAACGAGGAACGCTGCTTACTCAGAGTACTACGGT ACAGAAGAAGGTTCGTGTCCGTCTGGAAAAAGTGGTCGTTGGCGTCGTGATACGAAGGAT GATTGGAGCGGGCGTCACCCAGGTACCAACGCTGGCAAAACGGACCAGATGCAGCACAAC CAGACACTTATTCTGAAAGAGGTACAAGAGATTCAAGTAAATTTAAAGAGAGAAGGCATA GAAGCAGGAGGTCTGATTATTATTACTGGGACCAAGTCTAGAAAACACTGGAACCAGGTT TTGTAAGTCATGGTCCAAGAGTTGCTGTTCACAATGGTGCGACTCCTCGAAGATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q74H58 |
Definition |
sp|Q74H58|DNAJ_GEOSL Chaperone protein dnaJ OS=Geobacter sulfurreducens |
Align length |
125 |
Score (bit) |
45.8 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PWL0 |
Definition |
tr|A7PWL0|A7PWL0_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
77 |
Score (bit) |
76.6 |
E-value |
6.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914962|Adiantum capillus-veneris mRNA, clone: YMU001_000064_H08. (475 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PWL0|A7PWL0_VITVI Chromosome chr8 scaffold_34, whole genome... 77 6e-13 tr|Q94CJ9|Q94CJ9_ARATH Putative uncharacterized protein At5g1243... 76 1e-12 tr|A7PQW4|A7PQW4_VITVI Chromosome chr6 scaffold_25, whole genome... 67 4e-10 tr|Q8W4F7|Q8W4F7_ARATH Putative uncharacterized protein At2g4152... 64 5e-09 tr|Q56WX1|Q56WX1_ARATH Putative uncharacterized protein At2g4152... 64 5e-09 tr|Q3EBI4|Q3EBI4_ARATH Uncharacterized protein At2g41520.2 OS=Ar... 64 5e-09 tr|A5ARG1|A5ARG1_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09 tr|A9RUB7|A9RUB7_PHYPA Predicted protein OS=Physcomitrella paten... 59 9e-08 tr|Q75K76|Q75K76_ORYSJ Putative uncharacterized protein OJ1005_E... 54 5e-06 tr|Q0DIN5|Q0DIN5_ORYSJ Os05g0374600 protein OS=Oryza sativa subs... 54 5e-06 tr|B8AXP2|B8AXP2_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06 tr|A3B3E7|A3B3E7_ORYSJ Putative uncharacterized protein OS=Oryza... 54 5e-06 tr|Q4E587|Q4E587_TRYCR TPR-repeat protein, putative OS=Trypanoso... 52 1e-05 tr|Q5NBN3|Q5NBN3_ORYSJ cDNA clone:J023014J19, full insert sequen... 46 0.001 tr|Q0JNP9|Q0JNP9_ORYSJ Os01g0273500 protein (Fragment) OS=Oryza ... 46 0.001 tr|A2ZRP9|A2ZRP9_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001 tr|O22214|O22214_ARATH Putative uncharacterized protein At2g4152... 45 0.002 tr|Q8I489|Q8I489_PLAF7 Heat shock protein, putative OS=Plasmodiu... 44 0.003 tr|Q7PWF5|Q7PWF5_ANOGA AGAP008985-PA (Fragment) OS=Anopheles gam... 44 0.003 tr|A2WND1|A2WND1_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.007 tr|Q2F608|Q2F608_BOMMO DnaJ-like protein isoform A OS=Bombyx mor... 43 0.007 tr|Q8YSU2|Q8YSU2_ANASP DnaJ protein OS=Anabaena sp. (strain PCC ... 42 0.012 tr|Q3MEP4|Q3MEP4_ANAVT Heat shock protein DnaJ-like OS=Anabaena ... 42 0.012 tr|Q9ZEK1|Q9ZEK1_ANAVA DnaJ1 protein OS=Anabaena variabilis GN=d... 42 0.012 tr|Q9ZEJ5|Q9ZEJ5_9NOST DnaJ1 protein OS=Anabaena sp. GN=dnaJ1 PE... 42 0.012 tr|O49457|O49457_ARATH Heat-shock protein OS=Arabidopsis thalian... 42 0.020 tr|A8MR40|A8MR40_ARATH Uncharacterized protein At4g28480.2 OS=Ar... 42 0.020 tr|B6PK42|B6PK42_BRAFL Putative uncharacterized protein (Fragmen... 42 0.020 tr|B4U815|B4U815_HYDS0 Heat shock protein DnaJ domain protein OS... 41 0.026 tr|A9ILI0|A9ILI0_BART1 Heat shock chaperone protein DnaJ OS=Bart... 41 0.026
>tr|A7PWL0|A7PWL0_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025659001 PE=4 SV=1 Length = 933
Score = 76.6 bits (187), Expect = 6e-13 Identities = 37/77 (48%), Positives = 52/77 (67%) Frame = +1
Query: 4 GDDGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNAAYSEYYGT 183 GDDG LWKE+ +EV +DA+RLFK+IGE+YA+LSDP KR++YD+E +I RN+ Sbjct: 840 GDDGQLWKEIAEEVHKDADRLFKMIGEAYAVLSDPTKRSEYDLEEEI--RNSRRETSLSG 897
Query: 184 EEGSCPSGKSGRWRRDT 234 S +S + R+T Sbjct: 898 TSRSSSDAQSYSFERNT 914
>tr|Q94CJ9|Q94CJ9_ARATH Putative uncharacterized protein At5g12430 OS=Arabidopsis thaliana GN=At5g12430 PE=2 SV=1 Length = 1187
Score = 75.9 bits (185), Expect = 1e-12 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Frame = +1
Query: 10 DGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQI--STRNAAYSEYYGT 183 D LWKE+G+EVR+D ++LFK+IGE+YA+LSDP KR+QYD+E ++ S + S G Sbjct: 1089 DERLWKEIGEEVRKDTDKLFKMIGEAYAVLSDPAKRSQYDLEEEMHNSQKRRDGSSTSGA 1148
Query: 184 EEGSCPSGKSGRWRRDTKDDWSGR 255 + + P S RR+ ++ WS R Sbjct: 1149 DTDNYPFHSS---RRNWREGWSSR 1169
>tr|A7PQW4|A7PQW4_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022224001 PE=4 SV=1 Length = 1161
Score = 67.0 bits (162), Expect = 4e-10 Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 3/93 (3%) Frame = +1
Query: 1 NGDDGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNAAYSEYYG 180 NGD G WKE+ +EV RDA++LFK+IGE+YAILSDP KR++YD E ++ RNA + G Sbjct: 1054 NGDGG-FWKEIAEEVHRDADKLFKMIGEAYAILSDPSKRSRYDHEEEM--RNA---QKRG 1107
Query: 181 TEEGSCPSGKSGRWRRDTKDDWSGR---HPGTN 270 + K R D GR H GT+ Sbjct: 1108 NGSSTSRMSKIFHLREAAAGDNGGRFGDHMGTH 1140
>tr|Q8W4F7|Q8W4F7_ARATH Putative uncharacterized protein At2g41520; T32G6.4 OS=Arabidopsis thaliana GN=At2g41520/T32G6.4 PE=2 SV=1 Length = 1108
Score = 63.5 bits (153), Expect = 5e-09 Identities = 31/79 (39%), Positives = 46/79 (58%) Frame = +1
Query: 10 DGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNAAYSEYYGTEE 189 +G KE+ +EV + A+RLFK+IGE+Y++LSDP KR+ Y++E +I A+ Y + Sbjct: 1020 EGPWLKEILEEVHKGADRLFKMIGEAYSVLSDPTKRSDYELEEEIRKARASRESYRSRKA 1079
Query: 190 GSCPSGKSGRWRRDTKDDW 246 S RR KD W Sbjct: 1080 AEASSPPYQTSRRYWKDSW 1098
>tr|Q56WX1|Q56WX1_ARATH Putative uncharacterized protein At2g41520 OS=Arabidopsis thaliana GN=At2g41520 PE=2 SV=1 Length = 561
Score = 63.5 bits (153), Expect = 5e-09 Identities = 31/79 (39%), Positives = 46/79 (58%) Frame = +1
Query: 10 DGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNAAYSEYYGTEE 189 +G KE+ +EV + A+RLFK+IGE+Y++LSDP KR+ Y++E +I A+ Y + Sbjct: 473 EGPWLKEILEEVHKGADRLFKMIGEAYSVLSDPTKRSDYELEEEIRKARASRESYRSRKA 532
Query: 190 GSCPSGKSGRWRRDTKDDW 246 S RR KD W Sbjct: 533 AEASSPPYQTSRRYWKDSW 551
>tr|Q3EBI4|Q3EBI4_ARATH Uncharacterized protein At2g41520.2 OS=Arabidopsis thaliana GN=At2g41520 PE=4 SV=1 Length = 1077
Score = 63.5 bits (153), Expect = 5e-09 Identities = 31/79 (39%), Positives = 46/79 (58%) Frame = +1
Query: 10 DGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNAAYSEYYGTEE 189 +G KE+ +EV + A+RLFK+IGE+Y++LSDP KR+ Y++E +I A+ Y + Sbjct: 989 EGPWLKEILEEVHKGADRLFKMIGEAYSVLSDPTKRSDYELEEEIRKARASRESYRSRKA 1048
Query: 190 GSCPSGKSGRWRRDTKDDW 246 S RR KD W Sbjct: 1049 AEASSPPYQTSRRYWKDSW 1067
>tr|A5ARG1|A5ARG1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043011 PE=4 SV=1 Length = 1599
Score = 63.5 bits (153), Expect = 5e-09 Identities = 26/37 (70%), Positives = 33/37 (89%) Frame = +1
Query: 4 GDDGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVK 114 GDDG LWKE+ +EV +DA+RLFK+IGE+YA+LSDP K Sbjct: 1505 GDDGQLWKEIAEEVHKDADRLFKMIGEAYAVLSDPTK 1541
>tr|A9RUB7|A9RUB7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_178209 PE=4 SV=1 Length = 645
Score = 59.3 bits (142), Expect = 9e-08 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 29/121 (23%) Frame = +1
Query: 10 DGTLWKE---VGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQI------------ 144 D T+ KE + +E+R+D+E+LFK+IGE+YA+LSDP KRA+YD E ++ Sbjct: 493 DETIRKEGERLIEEIRKDSEQLFKLIGEAYAVLSDPAKRARYDSEEELRKLRTRSSDLAK 552
Query: 145 ----STRNAAYSEYYGTEEG---SCPSGKSGRWRRDT--KDDWSG-----RHPGTNAGKT 282 R++ S+ +G S G SG R + +D W G HPG +A + Sbjct: 553 NVYSDRRHSRASDGVNVNKGWSSSSSGGDSGSQSRASRQRDRWEGFNYQRWHPGPDAAQP 612
Query: 283 D 285 D Sbjct: 613 D 613
Score = 39.3 bits (90), Expect = 0.099 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = +3
Query: 264 YQRWQNGPDAAQPDTYSERG 323 YQRW GPDAAQPD Y+ RG Sbjct: 600 YQRWHPGPDAAQPDVYARRG 619
>tr|Q75K76|Q75K76_ORYSJ Putative uncharacterized protein OJ1005_E12.5 OS=Oryza sativa subsp. japonica GN=OJ1005_E12.5 PE=4 SV=1 Length = 220
Score = 53.5 bits (127), Expect = 5e-06 Identities = 28/51 (54%), Positives = 35/51 (68%) Frame = +1
Query: 7 DDGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNA 159 DDG W++V EV DA+ LFK IGE+Y +LSD KR +YDIE + RNA Sbjct: 122 DDG-FWRDVAKEVHADADHLFKAIGEAYNVLSDSDKRQEYDIEENL--RNA 169
>tr|Q0DIN5|Q0DIN5_ORYSJ Os05g0374600 protein OS=Oryza sativa subsp. japonica GN=Os05g0374600 PE=4 SV=1 Length = 394
Score = 53.5 bits (127), Expect = 5e-06 Identities = 28/51 (54%), Positives = 35/51 (68%) Frame = +1
Query: 7 DDGTLWKEVGDEVRRDAERLFKIIGESYAILSDPVKRAQYDIEYQISTRNA 159 DDG W++V EV DA+ LFK IGE+Y +LSD KR +YDIE + RNA Sbjct: 284 DDG-FWRDVAKEVHADADHLFKAIGEAYNVLSDSDKRQEYDIEENL--RNA 331
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