BP914970
Clone id YMU001_000065_A06
Library
Length 381
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCTGCATGTGCGTAGGAGATACTTAAACGAAGCAGCAAATGCTGCCTCTTTCAGATCTAC
AACAAGATCGGCTGTTTATATCATCACCTTAAGCAAAGCATTGGCTATTCCATGTACACT
ATGCTTGGACGTTTGAGAGTTTTGTTAAGGTTTGCATAATAGGAACAACGAGAGAGAGTG
CAGGGTCTTTGAGAGCAGCTAAGAATGTTGTTTCATTGTCCTGCAGACTTGGGGGGACAG
ACTTTTACATTCTTTGGACTAGCTGTAAAGAGTATTGAGTGGCACTATGCCTCAGCTGAT
TGGCCTCCAATGAGCGATATGATAGAAACTCAGTACAAAGATAGTTGTATTGATGTATGG
CGTGTGTGGTGTGGGAGCATA
■■Homology search results ■■ -
sp_hit_id Q08972
Definition sp|Q08972|NEW1_YEAST [NU+] prion formation protein 1 OS=Saccharomyces cerevisiae
Align length 37
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914970|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_A06.
(381 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q08972|NEW1_YEAST [NU+] prion formation protein 1 OS=Saccharo... 30 4.8
sp|Q9BZF1|OSBL8_HUMAN Oxysterol-binding protein-related protein ... 29 8.2
sp|A6Q7Y8|HEM1_SULNB Glutamyl-tRNA reductase OS=Sulfurovum sp. (... 29 8.2

>sp|Q08972|NEW1_YEAST [NU+] prion formation protein 1
OS=Saccharomyces cerevisiae GN=NEW1 PE=1 SV=1
Length = 1196

Score = 29.6 bits (65), Expect = 4.8
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3

Query: 238 VPPSLQD-NETTFLAALKDPALSLVVPIMQTLTKLSN 131
VP S++ + TF+A + +P+LSL+VPI+ LS+
Sbjct: 362 VPESVKSLSSVTFVAEVTEPSLSLLVPILNRSLNLSS 398


>sp|Q9BZF1|OSBL8_HUMAN Oxysterol-binding protein-related protein 8
OS=Homo sapiens GN=OSBPL8 PE=1 SV=3
Length = 889

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1

Query: 277 EWHYASAD---WPPMSDMIETQYKDSCI 351
EWHY AD W P++DMI+ + KD I
Sbjct: 740 EWHYKFADTRPWDPLNDMIQFE-KDGVI 766


>sp|A6Q7Y8|HEM1_SULNB Glutamyl-tRNA reductase OS=Sulfurovum sp.
(strain NBC37-1) GN=hemA PE=3 SV=1
Length = 435

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3

Query: 114 VHYAWTFESFVKVCIIGTTRESAGSLRAAKNVVSLSCRLGGTDFYILWTSCKEY 275
VH A+ + +V I+ TR++ S A V+ L + GG +FY L ++ K Y
Sbjct: 42 VHEAFIISTCNRVEIVMATRDNFSSYHA---VLGLMSQKGGLNFYELKSTAKRY 92


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914970|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_A06.
(381 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******