BP914971 |
Clone id |
YMU001_000065_A07 |
Library |
YMU01 |
Length |
583 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_A07. |
Accession |
BP914971 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCTCATCACCGCCGTGCTGCTATGTCTTTCGGCTCCTTCATACCTGTGCAATGTACGGA GCCCCTCCTCTGTCTCCTGGATTTATCTGTGTCTCTGCATCATCAAGGCTTAAAAGCCGT GCCACCATCACCTCTCTTCCTCCACGAGAAGACAACCCATTGTGCCTACACCGTCTTTCA AGTTCGGCAATGGGTAAACTTGACAACTCCCTGGCTGCAGCACCCTCTCCAATCGCTAAA GCAGCATCTTGACCCGACTCCGAACTGTCAGGAGCAACATCATCAACAGCAGTAACGTCT TTCACAGGTGGTGCATCACCTAGAATTGAATGGAAGGGAGGAACACCAGAATTTCCTGAC CGCAAAAAGGTGGCCCGCAGCCCATTTACATAGGCATCAGAAAATAGAAACCAATCTGAC CAGACTTGAAGGACTTTCAAAACGCGTTCCTTTAGAGCTTCTGCTGTAATACGCCCAGTG ATGCCTCGATAAAGCTCATTAAAACTCTCCATGATATCTGGAAGAGATGCTTCAAACTTT GTTCGATAGGCAGATGCATTTTTCACAGGTGCACTACTATTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R7X2 |
Definition |
sp|Q5R7X2|SR140_PONAB U2-associated protein SR140 OS=Pongo abelii |
Align length |
73 |
Score (bit) |
59.7 |
E-value |
1.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P661 |
Definition |
tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
165 |
Score (bit) |
235.0 |
E-value |
1.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914971|Adiantum capillus-veneris mRNA, clone: YMU001_000065_A07. (565 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome ... 235 1e-60 tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis... 235 1e-60 tr|A9SYF0|A9SYF0_PHYPA Predicted protein OS=Physcomitrella paten... 217 4e-55 tr|B8AIW7|B8AIW7_ORYSI Putative uncharacterized protein OS=Oryza... 214 3e-54 tr|Q9C5J3|Q9C5J3_ARATH Putative uncharacterized protein At5g2506... 211 2e-53 tr|Q6ETK6|Q6ETK6_ORYSJ Putative U2-associated SR140 protein OS=O... 211 2e-53 tr|A3A3S9|A3A3S9_ORYSJ Putative uncharacterized protein OS=Oryza... 211 2e-53 tr|A9TAZ0|A9TAZ0_PHYPA Predicted protein OS=Physcomitrella paten... 209 8e-53 tr|Q9LEV9|Q9LEV9_ARATH Putative uncharacterized protein T30N20_7... 191 2e-47 tr|A8J7H0|A8J7H0_CHLRE Predicted protein OS=Chlamydomonas reinha... 110 5e-23 tr|A5AZ11|A5AZ11_VITVI 3-phosphoshikimate 1-carboxyvinyltransfer... 100 4e-20 tr|A5PN19|A5PN19_DANRE Novel protein OS=Danio rerio GN=DKEY-17O1... 65 3e-09 tr|Q5BRK2|Q5BRK2_SCHJA SJCHGC08024 protein (Fragment) OS=Schisto... 64 6e-09 tr|Q4S4Z8|Q4S4Z8_TETNG Chromosome 6 SCAF14737, whole genome shot... 64 7e-09 tr|B5DEC9|B5DEC9_XENTR Putative uncharacterized protein OS=Xenop... 64 7e-09 tr|B3RIF0|B3RIF0_TRIAD Putative uncharacterized protein OS=Trich... 64 7e-09 tr|Q6ETK5|Q6ETK5_ORYSJ RNA recognition motif (RRM)-containing pr... 61 5e-08 tr|Q54TL3|Q54TL3_DICDI SWAP/Surp domain-containing protein OS=Di... 60 6e-08 tr|B4J8Q1|B4J8Q1_DROGR GH20523 OS=Drosophila grimshawi GN=GH2052... 60 8e-08 tr|B3ME93|B3ME93_DROAN GF11923 OS=Drosophila ananassae GN=GF1192... 60 8e-08 tr|B0S5J3|B0S5J3_DANRE Novel protein similar to vertebrate U2-as... 59 2e-07 tr|B6P0I3|B6P0I3_BRAFL Putative uncharacterized protein OS=Branc... 58 3e-07 tr|B6LHT0|B6LHT0_BRAFL Putative uncharacterized protein (Fragmen... 58 3e-07 tr|B4KRI3|B4KRI3_DROMO GI21069 OS=Drosophila mojavensis GN=GI210... 58 3e-07 tr|A7SN56|A7SN56_NEMVE Predicted protein OS=Nematostella vectens... 58 3e-07 tr|B4NN40|B4NN40_DROWI GK22959 OS=Drosophila willistoni GN=GK229... 57 5e-07 tr|B8PBR5|B8PBR5_9APHY Predicted protein OS=Postia placenta Mad-... 57 9e-07 tr|Q231D8|Q231D8_TETTH Ubiquitin interaction motif family protei... 56 1e-06 tr|A9UTE3|A9UTE3_MONBE Predicted protein OS=Monosiga brevicollis... 56 1e-06 tr|B0D0W4|B0D0W4_LACBS Predicted protein OS=Laccaria bicolor (st... 56 1e-06
>tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032794001 PE=4 SV=1 Length = 928
Score = 235 bits (600), Expect = 1e-60 Identities = 121/165 (73%), Positives = 135/165 (81%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASAYRTKFEA+LPDIMESFN+LYR +TGRITAEALKERV+KVLQVW+DWFLF Sbjct: 509 NSSAPVKNASAYRTKFEATLPDIMESFNDLYRSVTGRITAEALKERVMKVLQVWADWFLF 568
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVAPDSSESGQDXXXXXXXX 204 SDAYVNGLRATFLRSGNSGV PFHSI GDAP ++ T+ +D + +S QD Sbjct: 569 SDAYVNGLRATFLRSGNSGVTPFHSICGDAPEIEKKTSSEDTG-EGGKSNQDAALAMGKG 627
Query: 203 XXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L SLPIAELERRCRHNGLS GGRE+MVARLLSL++AE Q Sbjct: 628 AAMKELLSLPIAELERRCRHNGLSLVGGREIMVARLLSLEEAEKQ 672
>tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025939 PE=4 SV=1 Length = 1384
Score = 235 bits (600), Expect = 1e-60 Identities = 121/165 (73%), Positives = 135/165 (81%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASAYRTKFEA+LPDIMESFN+LYR +TGRITAEALKERV+KVLQVW+DWFLF Sbjct: 674 NSSAPVKNASAYRTKFEATLPDIMESFNDLYRSVTGRITAEALKERVMKVLQVWADWFLF 733
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVAPDSSESGQDXXXXXXXX 204 SDAYVNGLRATFLRSGNSGV PFHSI GDAP ++ T+ +D + +S QD Sbjct: 734 SDAYVNGLRATFLRSGNSGVTPFHSICGDAPEIEKKTSSEDTG-EGGKSNQDAALAMGKG 792
Query: 203 XXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L SLPIAELERRCRHNGLS GGRE+MVARLLSL++AE Q Sbjct: 793 AAMKELLSLPIAELERRCRHNGLSLVGGREIMVARLLSLEEAEKQ 837
>tr|A9SYF0|A9SYF0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234486 PE=4 SV=1 Length = 990
Score = 217 bits (552), Expect = 4e-55 Identities = 115/173 (66%), Positives = 132/173 (76%), Gaps = 8/173 (4%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASAYRT FE+ LPDIMESFN+LYR ITGRITAEALKERVLKVLQVW+DWFLF Sbjct: 512 NSSAPVKNASAYRTLFESRLPDIMESFNDLYRNITGRITAEALKERVLKVLQVWADWFLF 571
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVK------DVTAVDDVAPDSSE--SGQD 228 SD++V GLRATFLR GNSGVPPFH++ GD PVK D + P+ S+ + QD Sbjct: 572 SDSFVTGLRATFLRPGNSGVPPFHTLYGDNYPVKENEVGADTSDASSYFPEGSDLVADQD 631
Query: 227 XXXXXXXXXXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L++LP AELERRC+HNGLS RGG+EVMVARLLSL++AE Q Sbjct: 632 AALAMGEGAAARELANLPQAELERRCKHNGLSIRGGKEVMVARLLSLEEAEKQ 684
>tr|B8AIW7|B8AIW7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06097 PE=4 SV=1 Length = 997
Score = 214 bits (544), Expect = 3e-54 Identities = 109/165 (66%), Positives = 129/165 (78%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASA+RTKFEA+LPD++ESFN+LYR ITGRITAEALKERVLKVLQVW+DWFLF Sbjct: 546 NSSAPVKNASAFRTKFEAALPDVIESFNDLYRSITGRITAEALKERVLKVLQVWADWFLF 605
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVAPDSSESGQDXXXXXXXX 204 SDAY+NGLRATFLRS +SGV PFHS+ GD P ++ + +D D +D Sbjct: 606 SDAYLNGLRATFLRSSHSGVIPFHSLCGDTPEIEKKASSED-GSDGFRLNEDGALATGKA 664
Query: 203 XXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L LP+AELERRCRHNGLS GG+E+MVARLLSL++AE + Sbjct: 665 AATRELLGLPLAELERRCRHNGLSLCGGKEMMVARLLSLEEAEKE 709
>tr|Q9C5J3|Q9C5J3_ARATH Putative uncharacterized protein At5g25060 OS=Arabidopsis thaliana GN=At5g25060 PE=1 SV=1 Length = 946
Score = 211 bits (538), Expect = 2e-53 Identities = 112/165 (67%), Positives = 128/165 (77%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSA VKNASAYRTKFEA+LPDIMESFN+LYR ITGRITAEALKERVLKVLQVW+DWFLF Sbjct: 507 NSSARVKNASAYRTKFEATLPDIMESFNDLYRSITGRITAEALKERVLKVLQVWADWFLF 566
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVAPDSSESGQDXXXXXXXX 204 SDAY+ GLR+TFLRSG SGV FHSI GDAP +++ + D+++ D + D Sbjct: 567 SDAYIYGLRSTFLRSGVSGVTSFHSICGDAPEIENKSYADNMS-DIGKINPDAALAIGKG 625
Query: 203 XXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L +LPIAELERRCRHNGLS GGR +MV RLLSL+D E Q Sbjct: 626 AARQELMNLPIAELERRCRHNGLSLVGGRVMMVTRLLSLEDTEKQ 670
>tr|Q6ETK6|Q6ETK6_ORYSJ Putative U2-associated SR140 protein OS=Oryza sativa subsp. japonica GN=P0544B02.29-2 PE=4 SV=1 Length = 954
Score = 211 bits (538), Expect = 2e-53 Identities = 108/165 (65%), Positives = 128/165 (77%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASA+RTKFEA+LPD++ESFN+LYR ITGRITAEALKERVLKVLQVW+DWFLF Sbjct: 503 NSSAPVKNASAFRTKFEAALPDVIESFNDLYRSITGRITAEALKERVLKVLQVWADWFLF 562
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVAPDSSESGQDXXXXXXXX 204 SDAY+NGLRATFLRS + GV PFHS+ GD P ++ + +D D +D Sbjct: 563 SDAYLNGLRATFLRSSHLGVIPFHSLCGDTPEIEKKASSED-GSDGFRLNEDGALATGKA 621
Query: 203 XXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L LP+AELERRCRHNGLS GG+E+MVARLLSL++AE + Sbjct: 622 AATRELLGLPLAELERRCRHNGLSLCGGKEMMVARLLSLEEAEKE 666
>tr|A3A3S9|A3A3S9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005451 PE=3 SV=1 Length = 1379
Score = 211 bits (538), Expect = 2e-53 Identities = 108/165 (65%), Positives = 128/165 (77%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASA+RTKFEA+LPD++ESFN+LYR ITGRITAEALKERVLKVLQVW+DWFLF Sbjct: 539 NSSAPVKNASAFRTKFEAALPDVIESFNDLYRSITGRITAEALKERVLKVLQVWADWFLF 598
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVAPDSSESGQDXXXXXXXX 204 SDAY+NGLRATFLRS + GV PFHS+ GD P ++ + +D D +D Sbjct: 599 SDAYLNGLRATFLRSSHLGVIPFHSLCGDTPEIEKKASSED-GSDGFRLNEDGALATGKA 657
Query: 203 XXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQ 69 L LP+AELERRCRHNGLS GG+E+MVARLLSL++AE + Sbjct: 658 AATRELLGLPLAELERRCRHNGLSLCGGKEMMVARLLSLEEAEKE 702
>tr|A9TAZ0|A9TAZ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193248 PE=4 SV=1 Length = 990
Score = 209 bits (532), Expect = 8e-53 Identities = 114/175 (65%), Positives = 131/175 (74%), Gaps = 8/175 (4%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 NSSAPVKNASAYRT FE+ LPDIMESFN+LYR ITGRITAEALKERVLKVLQVW+DWFLF Sbjct: 529 NSSAPVKNASAYRTLFESRLPDIMESFNDLYRNITGRITAEALKERVLKVLQVWADWFLF 588
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVKDVTAVDDVA------PDSS--ESGQD 228 SD++V GLRATFLR GNSGVPPFH++ GD P K+ + ++ P+ S + D Sbjct: 589 SDSFVTGLRATFLRPGNSGVPPFHTLCGDNLPSKENGSGSEMRDAGGYFPEGSGGVADPD 648
Query: 227 XXXXXXXXXXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLDDAETQIN 63 L+SLP AELERRC+HNGLS RGG EVMVARLLSL++AE Q N Sbjct: 649 AALAMGEGAAARELASLPQAELERRCKHNGLSIRGGIEVMVARLLSLEEAEKQKN 703
>tr|Q9LEV9|Q9LEV9_ARATH Putative uncharacterized protein T30N20_70 OS=Arabidopsis thaliana GN=T30N20_70 PE=4 SV=1 Length = 957
Score = 191 bits (485), Expect = 2e-47 Identities = 108/191 (56%), Positives = 125/191 (65%), Gaps = 26/191 (13%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALK---------------- 432 NSSA VKNASAYRTKFEA+LPDIMESFN+LY + GRITAEAL+ Sbjct: 498 NSSARVKNASAYRTKFEATLPDIMESFNDLYHSVHGRITAEALRVIPESKYSSYVVLYPL 557
Query: 431 ----------ERVLKVLQVWSDWFLFSDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVK 282 ERVLKVLQVW+DWFLFSDAY+NGLRATFLRS N GV FHSI GDAP ++ Sbjct: 558 KFCSHSYFVQERVLKVLQVWADWFLFSDAYINGLRATFLRSRNFGVTSFHSICGDAPDIE 617
Query: 281 DVTAVDDVAPDSSESGQDXXXXXXXXXXXXXLSSLPIAELERRCRHNGLSSRGGREVMVA 102 + ++ D+ + QD L + PI+ELERRCRHNGLS GGRE+MVA Sbjct: 618 KKGLIGNM-NDADKINQDAALAMGEGAARQELMNRPISELERRCRHNGLSLLGGREMMVA 676
Query: 101 RLLSLDDAETQ 69 RL+ L DAE Q Sbjct: 677 RLVCLKDAEKQ 687
>tr|A8J7H0|A8J7H0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_150344 PE=4 SV=1 Length = 1010
Score = 110 bits (275), Expect = 5e-23 Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 1/161 (0%) Frame = -3
Query: 563 NSSAPVKNASAYRTKFEASLPDIMESFNELYRGITGRITAEALKERVLKVLQVWSDWFLF 384 N++APV+NAS YR K +A+LPD+ ES NE YRG GR+ EAL+ VL+VL+ W D ++F Sbjct: 517 NATAPVRNASRYRVKLQAALPDVFESLNETYRGADGRMLQEALRRHVLRVLRCWRDKYIF 576
Query: 383 SDAYVNGLRATFLRSGNSGVPPFHSILGDAPPVK-DVTAVDDVAPDSSESGQDXXXXXXX 207 +D Y+NGL+A FL +G+S LGD P ++ ++ A + Sbjct: 577 TDDYLNGLQAVFLTTGSS----TEKALGDNPSLRAELEAAEQ------------------ 614
Query: 206 XXXXXXLSSLPIAELERRCRHNGLSSRGGREVMVARLLSLD 84 ELERR + GLS+RGG+ M+ R L LD Sbjct: 615 ------------EELERRAKLAGLSTRGGKAAMIDRFLILD 643
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