BP914977 |
Clone id |
YMU001_000065_B01 |
Library |
YMU01 |
Length |
588 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_B01. |
Accession |
BP914977 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CATGTTCATCAAGTGCTACCTCGCCTGCAACAGCCATCTCTTGAAAATTCCTGCTAAAGG TTACATTGATTCTAGATACAAGTCCTCTCGAGGTTGGTAACCACTTATCTTTGATGGCTT CAACCCCTTGCTTGCATTCATTTAATCTAGTCGCCTCCTCATCGAGTTTGGCACTCAAGC TAGAAATCATTCGGCAGCGTGCTTCATACTCTTCTAAGACACTATCATTCAAGCAAAGTA CAGCATTCGCCTCTGCCATATTTTCTTGAATTGCATCATCCAAATCAGCAATCGTATCTG GCATCTCTGCAAACTGCTGTTTAATCTCAGGCGTGAGTTTTGCAATGTTTTCTGCTGCAA CTTTCGCAGCCTCGACTGCCCTTCTACACTCTTCGACACTTCTCTTACAATGGTCATACT CCTGCTGCGCTTTGGTTCCCTCTGTCTCAATTAATTTCACAGAACGCTCCATTTCTCTGA TCTTTAATTCGACTTCACAGGCACAAAGACGTCTTGCAAGATACTGTTTCTGGATACTGA CAGCTTCATGCAGAAGATCCTTAATTTCAATCGCGCCTTTATGACGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CG46 |
Definition |
sp|Q8CG46|SMC5_MOUSE Structural maintenance of chromosomes protein 5 OS=Mus musculus |
Align length |
101 |
Score (bit) |
68.6 |
E-value |
2.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5KQG5 |
Definition |
tr|Q5KQG5|Q5KQG5_ORYSJ Os05g0596600 protein OS=Oryza sativa subsp. japonica |
Align length |
195 |
Score (bit) |
166.0 |
E-value |
7.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914977|Adiantum capillus-veneris mRNA, clone: YMU001_000065_B01. (588 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5KQG5|Q5KQG5_ORYSJ Os05g0596600 protein OS=Oryza sativa subs... 166 7e-40 tr|B8AXI3|B8AXI3_ORYSI Putative uncharacterized protein OS=Oryza... 166 7e-40 tr|Q8GU53|Q8GU53_ORYSA SMC5 protein OS=Oryza sativa GN=smc5 PE=2... 164 3e-39 tr|A3B7G5|A3B7G5_ORYSJ Putative uncharacterized protein OS=Oryza... 161 2e-38 tr|A9TNP8|A9TNP8_PHYPA Predicted protein OS=Physcomitrella paten... 160 5e-38 tr|Q9LFS8|Q9LFS8_ARATH Putative uncharacterized protein F1N13_60... 157 4e-37 tr|A7Q229|A7Q229_VITVI Chromosome chr13 scaffold_45, whole genom... 150 4e-35 tr|B8BL58|B8BL58_ORYSI Putative uncharacterized protein OS=Oryza... 141 2e-32 tr|Q01FG0|Q01FG0_OSTTA Structural maintenance of chromosomes (IS... 88 3e-16 tr|A4RS60|A4RS60_OSTLU Predicted protein OS=Ostreococcus lucimar... 75 3e-12 tr|Q08BS1|Q08BS1_DANRE Zgc:152845 OS=Danio rerio GN=zgc:152845 P... 74 8e-12 tr|A7RJE8|A7RJE8_NEMVE Predicted protein OS=Nematostella vectens... 70 9e-11 tr|Q16RL3|Q16RL3_AEDAE Structural maintenance of chromosomes 5 s... 69 2e-10 tr|B0WYP3|B0WYP3_CULQU Structural maintenance of chromosomes 5 s... 65 4e-09 tr|A8IIJ6|A8IIJ6_CHLRE Structural maintenance of chromosomes pro... 64 5e-09 tr|A8P6I0|A8P6I0_COPC7 Putative uncharacterized protein OS=Copri... 64 6e-09 tr|B2AUJ5|B2AUJ5_PODAN Predicted CDS Pa_1_19340 OS=Podospora ans... 62 2e-08 tr|B6M611|B6M611_BRAFL Putative uncharacterized protein OS=Branc... 62 3e-08 tr|B2W785|B2W785_PYRTR Structural maintenance of chromosomes pro... 61 5e-08 tr|Q4RVV6|Q4RVV6_TETNG Chromosome 9 SCAF14991, whole genome shot... 60 1e-07 tr|Q2H4A7|Q2H4A7_CHAGB Putative uncharacterized protein OS=Chaet... 60 1e-07 tr|Q4P8Y7|Q4P8Y7_USTMA Putative uncharacterized protein OS=Ustil... 59 3e-07 tr|Q4TH76|Q4TH76_TETNG Chromosome undetermined SCAF3160, whole g... 58 4e-07 tr|B0CZF2|B0CZF2_LACBS Predicted protein OS=Laccaria bicolor (st... 58 4e-07 tr|Q54FE3|Q54FE3_DICDI Structural maintenance of chromosome prot... 57 1e-06 tr|B6P5C1|B6P5C1_BRAFL Putative uncharacterized protein OS=Branc... 56 2e-06 tr|Q8I950|Q8I950_ANOGA SMC5 protein OS=Anopheles gambiae GN=smc5... 55 4e-06 tr|Q7PV59|Q7PV59_ANOGA AGAP011623-PA OS=Anopheles gambiae GN=AGA... 55 4e-06 tr|A1CMQ0|A1CMQ0_ASPCL Structural maintenance of chromosomes 5 s... 55 4e-06 tr|A6R609|A6R609_AJECN Putative uncharacterized protein OS=Ajell... 54 5e-06
>tr|Q5KQG5|Q5KQG5_ORYSJ Os05g0596600 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0086G17.10 PE=2 SV=1 Length = 1065
Score = 166 bits (421), Expect = 7e-40 Identities = 88/195 (45%), Positives = 128/195 (65%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R++ +++KDLL EAV+++ + + + E++ KI EME+ VK +E +A +EY++C Sbjct: 734 RYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENC 793
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 K E+IA +T ++ ++F EMP TI +LD AIQ+ +EAN++L LN Sbjct: 794 KRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLN 853
Query: 226 DSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRN 47 +VL EY++R R I S+S KL+++ C +EA K KWLPT R LVS+IN TFSRN Sbjct: 854 QNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRN 913
Query: 46 FQEMAVAGEVALDEH 2 FQEMAVAGEV+LDEH Sbjct: 914 FQEMAVAGEVSLDEH 928
>tr|B8AXI3|B8AXI3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21247 PE=4 SV=1 Length = 1179
Score = 166 bits (421), Expect = 7e-40 Identities = 88/195 (45%), Positives = 128/195 (65%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R++ +++KDLL EAV+++ + + + E++ KI EME+ VK +E +A +EY++C Sbjct: 804 RYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENC 863
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 K E+IA +T ++ ++F EMP TI +LD AIQ+ +EAN++L LN Sbjct: 864 KRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLN 923
Query: 226 DSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRN 47 +VL EY++R R I S+S KL+++ C +EA K KWLPT R LVS+IN TFSRN Sbjct: 924 QNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRN 983
Query: 46 FQEMAVAGEVALDEH 2 FQEMAVAGEV+LDEH Sbjct: 984 FQEMAVAGEVSLDEH 998
>tr|Q8GU53|Q8GU53_ORYSA SMC5 protein OS=Oryza sativa GN=smc5 PE=2 SV=1 Length = 1056
Score = 164 bits (415), Expect = 3e-39 Identities = 87/195 (44%), Positives = 128/195 (65%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R++ +++KDLL EAV+++ + + + E++ KI EME+ VK +E +A +EY++C Sbjct: 725 RYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENC 784
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 + E+IA +T ++ ++F EMP TI +LD AIQ+ +EAN++L LN Sbjct: 785 ELMFQSIKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLN 844
Query: 226 DSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRN 47 +VL EY++R R I S+S KL+++ C +EA K KWLPT R LVS+IN TFSRN Sbjct: 845 QNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKVKWLPTLRTLVSKINSTFSRN 904
Query: 46 FQEMAVAGEVALDEH 2 FQEMAVAGEV+LDEH Sbjct: 905 FQEMAVAGEVSLDEH 919
>tr|A3B7G5|A3B7G5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018987 PE=4 SV=1 Length = 1016
Score = 161 bits (408), Expect = 2e-38 Identities = 86/193 (44%), Positives = 126/193 (65%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R++ +++KDLL EAV+++ + + + E++ KI EME+ VK +E +A +EY++C Sbjct: 683 RYELVLKLKDLLIEAVALKWSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENC 742
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 K E+IA +T ++ ++F EMP TI +LD AIQ+ +EAN++L LN Sbjct: 743 KRKTQEHKQQLSNAKQHAESIAMITEDLAKKFLEMPTTIEELDCAIQDTESEANSMLFLN 802
Query: 226 DSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRN 47 +VL EY++R R I S+S KL+++ C +EA K KWLPT R LVS+IN TFSRN Sbjct: 803 QNVLLEYQSRQREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSRN 862
Query: 46 FQEMAVAGEVALD 8 FQEMAVAGEV+LD Sbjct: 863 FQEMAVAGEVSLD 875
>tr|A9TNP8|A9TNP8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223981 PE=4 SV=1 Length = 1019
Score = 160 bits (405), Expect = 5e-38 Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 1/196 (0%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R K +++KD++ E Q Q + +L + E++LK+RE ER +K E + Q+EYD Sbjct: 686 RKKNVLKLKDVVKEYAKNQIQLIFEQLASAEIDLKVREQERELKSHEQLALQYQREYDDS 745
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 K E +A +T E++ F EMPDT+ DL+ I + +AEANAVLC N Sbjct: 746 KMETGRCRQQLENAKRAAEQVAAITNELQNMFREMPDTVEDLEYLISDTLAEANAVLCNN 805
Query: 226 DSVLEEYEARCRMISSL-SAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSR 50 VLEEYE RC+ + +L + L E +L +C ++++K KWLPT R LV++IN TF Sbjct: 806 PGVLEEYERRCKQVHNLLTYDLGTERAQLQDCLSEIDSVKAKWLPTLRTLVTKINDTFGH 865
Query: 49 NFQEMAVAGEVALDEH 2 NF+EMAVAGEV+LDEH Sbjct: 866 NFREMAVAGEVSLDEH 881
>tr|Q9LFS8|Q9LFS8_ARATH Putative uncharacterized protein F1N13_60 OS=Arabidopsis thaliana GN=F1N13_60 PE=4 SV=1 Length = 1053
Score = 157 bits (397), Expect = 4e-37 Identities = 80/194 (41%), Positives = 126/194 (64%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R+ AI +K LL EAV+ + Y + + + E+E KIRE E ++K E + ++C Sbjct: 717 RYTYAINLKKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYC 776
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 K E++A +TPE+K++F EMP T+ +L+ AIQ+N+++AN++L +N Sbjct: 777 KKEVEGKQQRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFIN 836
Query: 226 DSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRN 47 +++L+EYE R I ++S KL+ + L+ C + ++++K+KWLPT R LV +IN TFS N Sbjct: 837 ENILQEYEHRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHN 896
Query: 46 FQEMAVAGEVALDE 5 FQEMAVAGEV+LDE Sbjct: 897 FQEMAVAGEVSLDE 910
>tr|A7Q229|A7Q229_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028716001 PE=4 SV=1 Length = 1051
Score = 150 bits (380), Expect = 4e-35 Identities = 80/195 (41%), Positives = 124/195 (63%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHC 407 R++ IEIK+LL E+VS ++ + + + + E + KIRE+E +K E +A +++C Sbjct: 717 RYQCVIEIKNLLIESVSYKRTFAEKHMTSIEFDAKIRELEVGIKQQERFAMQASLHFENC 776
Query: 406 KXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLN 227 K E+IA +TP +++ F EMP TI DL+ AIQ+ +++AN++L LN Sbjct: 777 KKEVEDHRQQLAAAKRHAESIAVITPVLEKAFLEMPATIEDLEAAIQDTISQANSILFLN 836
Query: 226 DSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRN 47 ++LEEYE + I ++S KL+ + L ++A+K+ WL T R LV++IN TFSRN Sbjct: 837 HNILEEYEECQQKIEAISTKLEADEKELRMYLAEIDALKENWLTTLRNLVAQINETFSRN 896
Query: 46 FQEMAVAGEVALDEH 2 FQ+MAVAGEV+LDEH Sbjct: 897 FQDMAVAGEVSLDEH 911
>tr|B8BL58|B8BL58_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36551 PE=4 SV=1 Length = 923
Score = 141 bits (356), Expect = 2e-32 Identities = 80/191 (41%), Positives = 113/191 (59%) Frame = -3
Query: 574 AIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIETEGTKAQQEYDHCKXXX 395 A+ ++ L E S Q + + E++ KI EME++V+ E + +A Y +CK Sbjct: 669 ALSLRICLLELCS-QTDCTQENMASIELDTKIWEMEKNVQKFERDAVEAASGYANCKRKT 727
Query: 394 XXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLNDSVL 215 E+IAK+T E++++F +MP TI +LD AIQ+ +EAN++ LN +VL Sbjct: 728 QVHEQQLYIAKQHAESIAKITKELEKEFHKMPATIEELDCAIQDTESEANSMFFLNQNVL 787
Query: 214 EEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRNFQEM 35 EY+ R I S+S KL+ + C +E K KW PT R LVS+IN TFSRNFQEM Sbjct: 788 LEYQNRKHEIESISEKLEHDKEECQRCYSDIETTKGKWFPTLRTLVSKINNTFSRNFQEM 847
Query: 34 AVAGEVALDEH 2 AVAGEV+LDEH Sbjct: 848 AVAGEVSLDEH 858
>tr|Q01FG0|Q01FG0_OSTTA Structural maintenance of chromosomes (ISS) OS=Ostreococcus tauri GN=Ot01g06190 PE=4 SV=1 Length = 1075
Score = 88.2 bits (217), Expect = 3e-16 Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 2/194 (1%) Frame = -3
Query: 586 RHKGAIEIKDLLHEAVSIQKQYLARRLCACEVELKIREMERSVKLIET--EGTKAQQEYD 413 R + AI++ D + + K+ + L + E +++ E E ++ IET E KAQ++ Sbjct: 733 RIRWAIQMCDAVEAEHAASKELTLKLLQSMEKRVQMEETESRLRDIETRIESLKAQRQ-- 790
Query: 412 HCKXXXXXXXXXXXXXXXXXENIAKLTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLC 233 K E++ LT E+ + F E PDT+ +L+ IQ +A+A+LC Sbjct: 791 EIKDKFATAKNKCLVLKGEAESVVTLTDEVHKMFEEWPDTVEELEFEIQNLREQADAILC 850
Query: 232 LNDSVLEEYEARCRMISSLSAKLDEEATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFS 53 N +VL+E+ R ++SL+ L+ E L ++G++ +K +WLP + + +I+ F Sbjct: 851 HNPTVLDEFNKRRAEMTSLTRTLESEKEELAMKQKGIDDVKRQWLPQLKEKIQKISDEFQ 910
Query: 52 RNFQEMAVAGEVAL 11 NF + AG+V L Sbjct: 911 SNFARIGCAGQVTL 924
>tr|A4RS60|A4RS60_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_29255 PE=4 SV=1 Length = 1076
Score = 75.1 bits (183), Expect = 3e-12 Identities = 38/109 (34%), Positives = 66/109 (60%) Frame = -3
Query: 337 LTPEIKQQFAEMPDTIADLDDAIQENMAEANAVLCLNDSVLEEYEARCRMISSLSAKLDE 158 LT EI ++F + P TI +L+ I +A+A+LC N +VL+E+ R +++L+ L Sbjct: 822 LTEEINKKFEQWPITIEELEFDISRLQEQADAILCHNPAVLDEFNKRKAEMATLTKTLAS 881
Query: 157 EATRLNECKQGVEAIKDKWLPTSRGLVSRINVTFSRNFQEMAVAGEVAL 11 E L + ++K++WLP R +V++I+ FSRNF + AG+++L Sbjct: 882 EKAELAVEHAAITSVKNEWLPKLRKIVAKISDDFSRNFANIGCAGQISL 930
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