BP914978 |
Clone id |
YMU001_000065_B02 |
Library |
YMU01 |
Length |
414 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_B02. |
Accession |
BP914978 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL648Contig1 |
Sequence |
TAGGGTCAAATGACAACAGAACCACCTCGTATGCATGTATATTCCGCCTTTCCGAAGCTT AGCTGAGAGATAAGTGCAGGTGAAACAAGAATCACCTGCACAGCAAATGCTATCTAGAAA CCACACTTCCATTGTGTTGAGGCTTCAACTTCTCCACAAAAGACTTGTAAAACGACTTGA AATCCTTCATATCTGAGCGCTGAATATGAAAGCAGTACTGATCTGCCATATTAGGGGGGC AATGAACAGCAGGTAGCACTTGAGTTGCTTGATGAATCAAAAACTCATTGCCGCAATAAT CATATATCACCTTTTGAGCAGCAACGATTTCACCAAATAAATTAAATGTATTTGCATCAC GCAAATTGAAAGATGGCTCCAGAACACTGTACACACAGCACTTTGCAGCAAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O94258 |
Definition |
sp|O94258|XPOT_SCHPO Exportin-T OS=Schizosaccharomyces pombe |
Align length |
85 |
Score (bit) |
57.4 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SRJ5 |
Definition |
tr|A9SRJ5|A9SRJ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
92 |
Score (bit) |
149.0 |
E-value |
9.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914978|Adiantum capillus-veneris mRNA, clone: YMU001_000065_B02. (414 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SRJ5|A9SRJ5_PHYPA Predicted protein OS=Physcomitrella paten... 149 9e-35 tr|A7P6H8|A7P6H8_VITVI Chromosome chr9 scaffold_7, whole genome ... 123 5e-27 tr|A5CBF7|A5CBF7_VITVI Putative uncharacterized protein OS=Vitis... 123 5e-27 tr|Q7XAC4|Q7XAC4_ARATH PAUSED OS=Arabidopsis thaliana PE=2 SV=1 112 9e-24 tr|Q7PC79|Q7PC79_ARATH Exportin-t OS=Arabidopsis thaliana GN=PAU... 112 9e-24 tr|Q8H3A7|Q8H3A7_ORYSJ Os07g0613300 protein OS=Oryza sativa subs... 101 2e-20 tr|Q9CAH2|Q9CAH2_ARATH Putative exportin, tRNA (Nuclear export r... 88 2e-16 tr|A3BM52|A3BM52_ORYSJ Putative uncharacterized protein OS=Oryza... 72 1e-11 tr|A2YNM7|A2YNM7_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11 tr|B5DFQ7|B5DFQ7_XENTR Putative uncharacterized protein OS=Xenop... 57 4e-07 tr|A7RW43|A7RW43_NEMVE Predicted protein OS=Nematostella vectens... 57 6e-07 tr|A8KA19|A8KA19_HUMAN cDNA FLJ75831, highly similar to Homo sap... 50 7e-05 tr|B6GZP1|B6GZP1_PENCH Pc12g05760 protein OS=Penicillium chrysog... 49 1e-04 tr|B8MFN5|B8MFN5_9EURO tRNA exportin, putative OS=Talaromyces st... 49 2e-04 tr|B7Q328|B7Q328_IXOSC Exportin-T, putative OS=Ixodes scapularis... 42 0.012 tr|B6K0U6|B6K0U6_SCHJP Karyopherin OS=Schizosaccharomyces japoni... 41 0.034 tr|Q4WZ44|Q4WZ44_ASPFU Nonribosomal peptide synthase, putative O... 37 0.64 tr|B0XZI1|B0XZI1_ASPFC Nonribosomal peptide synthase, putative O... 37 0.64 tr|B8P4A2|B8P4A2_9APHY Predicted protein OS=Postia placenta Mad-... 35 2.4 tr|A2QJ93|A2QJ93_ASPNC Contig An04c0180, complete genome OS=Aspe... 33 9.3
>tr|A9SRJ5|A9SRJ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134096 PE=4 SV=1 Length = 1001
Score = 149 bits (375), Expect = 9e-35 Identities = 64/92 (69%), Positives = 79/92 (85%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FAA+CC+Y V EPSFN RDANT LFGEIV AQK++Y+ CGN+ L+H AT+VLPAVHCPP Sbjct: 900 FAAECCIYKVSEPSFNFRDANTVALFGEIVTAQKLLYEKCGNDLLMHLATKVLPAVHCPP 959
Query: 232 NMADQYCFHIQRSDMKDFKSFYKSFVEKLKPQ 137 N+A+Q+C HIQRSD+K+ K YKSF+EKL+PQ Sbjct: 960 NLAEQFCLHIQRSDVKELKPLYKSFIEKLRPQ 991
>tr|A7P6H8|A7P6H8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034073001 PE=4 SV=1 Length = 992
Score = 123 bits (308), Expect = 5e-27 Identities = 56/98 (57%), Positives = 73/98 (74%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+YSVL+ SF RDANT LFGEIV AQK++Y+ GNEFLIH ++ PA HCP Sbjct: 893 FATNCCLYSVLDRSFEFRDANTLVLFGEIVLAQKIMYEKFGNEFLIHFVSKGFPAAHCPQ 952
Query: 232 NMADQYCFHIQRSDMKDFKSFYKSFVEKLKPQHNGSVV 119 ++A++YC +Q SD+K KSFY+S +E L+ Q NGS+V Sbjct: 953 DLAEEYCQKLQGSDIKALKSFYQSLIESLRHQQNGSLV 990
>tr|A5CBF7|A5CBF7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042408 PE=4 SV=1 Length = 251
Score = 123 bits (308), Expect = 5e-27 Identities = 56/98 (57%), Positives = 73/98 (74%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+YSVL+ SF RDANT LFGEIV AQK++Y+ GNEFLIH ++ PA HCP Sbjct: 152 FATNCCLYSVLDRSFEFRDANTLVLFGEIVLAQKIMYEKFGNEFLIHFVSKGFPAAHCPQ 211
Query: 232 NMADQYCFHIQRSDMKDFKSFYKSFVEKLKPQHNGSVV 119 ++A++YC +Q SD+K KSFY+S +E L+ Q NGS+V Sbjct: 212 DLAEEYCQKLQGSDIKALKSFYQSLIESLRHQQNGSLV 249
>tr|Q7XAC4|Q7XAC4_ARATH PAUSED OS=Arabidopsis thaliana PE=2 SV=1 Length = 988
Score = 112 bits (280), Expect = 9e-24 Identities = 50/98 (51%), Positives = 70/98 (71%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+YSVL+ SFN DANT LFGEI+ AQKV+Y+ GN FL+H ++ P+ H P Sbjct: 889 FATNCCLYSVLDKSFNFSDANTHALFGEIITAQKVMYEKFGNTFLMHLMSKSFPSAHIPQ 948
Query: 232 NMADQYCFHIQRSDMKDFKSFYKSFVEKLKPQHNGSVV 119 ++A+QYC +Q +D++ KS+Y+S +E L+ Q NGS V Sbjct: 949 DLAEQYCQKLQGNDIRSLKSYYQSLIENLRLQQNGSHV 986
>tr|Q7PC79|Q7PC79_ARATH Exportin-t OS=Arabidopsis thaliana GN=PAUSED PE=4 SV=1 Length = 988
Score = 112 bits (280), Expect = 9e-24 Identities = 50/98 (51%), Positives = 70/98 (71%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+YSVL+ SFN DANT LFGEI+ AQKV+Y+ GN FL+H ++ P+ H P Sbjct: 889 FATNCCLYSVLDKSFNFSDANTHALFGEIITAQKVMYEKFGNTFLMHLMSKSFPSAHIPQ 948
Query: 232 NMADQYCFHIQRSDMKDFKSFYKSFVEKLKPQHNGSVV 119 ++A+QYC +Q +D++ KS+Y+S +E L+ Q NGS V Sbjct: 949 DLAEQYCQKLQGNDIRSLKSYYQSLIENLRLQQNGSHV 986
>tr|Q8H3A7|Q8H3A7_ORYSJ Os07g0613300 protein OS=Oryza sativa subsp. japonica GN=P0616D06.103 PE=2 SV=1 Length = 980
Score = 101 bits (252), Expect = 2e-20 Identities = 49/98 (50%), Positives = 70/98 (71%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+ SVL+ SFN RD + LFGEI+ AQKV+Y+ G F+++ T++ A HCPP Sbjct: 882 FATGCCLQSVLDKSFNFRDGISIALFGEIMMAQKVMYERFGENFVVNFVTKLREA-HCPP 940
Query: 232 NMADQYCFHIQRSDMKDFKSFYKSFVEKLKPQHNGSVV 119 ++A+QY +Q +D+K FKSFY+S V K++ Q NGS+V Sbjct: 941 DLAEQYYQKLQGNDIKAFKSFYESLVMKIRQQQNGSLV 978
>tr|Q9CAH2|Q9CAH2_ARATH Putative exportin, tRNA (Nuclear export receptor for tRNAs); 81050-85729 OS=Arabidopsis thaliana GN=F28P22.25 PE=4 SV=1 Length = 993
Score = 88.2 bits (217), Expect = 2e-16 Identities = 38/72 (52%), Positives = 52/72 (72%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+YSVL+ SFN DANT LFGEI+ AQKV+Y+ GN FL+H ++ P+ H P Sbjct: 867 FATNCCLYSVLDKSFNFSDANTHALFGEIITAQKVMYEKFGNTFLMHLMSKSFPSAHIPQ 926
Query: 232 NMADQYCFHIQR 197 ++A+QYC +Q+ Sbjct: 927 DLAEQYCQKLQK 938
>tr|A3BM52|A3BM52_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024124 PE=4 SV=1 Length = 976
Score = 72.4 bits (176), Expect = 1e-11 Identities = 35/73 (47%), Positives = 50/73 (68%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+ SVL+ SFN RD + LFGEI+ AQKV+Y+ G F+++ T++ A HCPP Sbjct: 872 FATGCCLQSVLDKSFNFRDGISIALFGEIMMAQKVMYERFGENFVVNFVTKLREA-HCPP 930
Query: 232 NMADQYCFHIQRS 194 ++A+QY +Q S Sbjct: 931 DLAEQYYQKLQGS 943
>tr|A2YNM7|A2YNM7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26846 PE=4 SV=1 Length = 986
Score = 72.4 bits (176), Expect = 1e-11 Identities = 35/73 (47%), Positives = 50/73 (68%) Frame = -3
Query: 412 FAAKCCVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPP 233 FA CC+ SVL+ SFN RD + LFGEI+ AQKV+Y+ G F+++ T++ A HCPP Sbjct: 882 FATGCCLQSVLDKSFNFRDGISIALFGEIMMAQKVMYERFGENFVVNFVTKLREA-HCPP 940
Query: 232 NMADQYCFHIQRS 194 ++A+QY +Q S Sbjct: 941 DLAEQYYQKLQGS 953
>tr|B5DFQ7|B5DFQ7_XENTR Putative uncharacterized protein OS=Xenopus tropicalis PE=2 SV=1 Length = 962
Score = 57.4 bits (137), Expect = 4e-07 Identities = 28/86 (32%), Positives = 45/86 (52%) Frame = -3
Query: 397 CVYSVLEPSFNLRDANTFNLFGEIVAAQKVIYDYCGNEFLIHQATQVLPAVHCPPNMADQ 218 C + L+PSF+L DA T E K IY G E + + + LP++ P + + Sbjct: 877 CFLAPLKPSFDLADAQTVLALSECAVTMKTIYIKRGPECIQYLQQEYLPSLQVAPEIIQE 936
Query: 217 YCFHIQRSDMKDFKSFYKSFVEKLKP 140 +C +Q+ D K FK++ K F ++ KP Sbjct: 937 FCQALQQPDAKVFKNYLKVFFQRAKP 962
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