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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914981
Clone id YMU001_000065_B05
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTCTCAAGCTGAAGTGACAACAAAAATTTAGTAAGAAGACTCAAATGACTACACCTTT
CAATGTGATGATGTATTACATGACTCCTTCCAGGAGACCAACTAGGGAATCAAAACTGTT
GATGGTTGAACTTACAATGCCATCTCACTCTGCAGAAATAATGAGCTAGCGAGTAGCTAG
AATCAGCATTCGTATAAAATGCAAGGAATCTCCTTTCATTGAATGGCATACACAGAGGAC
CACTTTTTCCATGGTAAAACCAGTAAGCATTAAGATGCGAGAAACTTGAGGGGTTTTGTC
TGTGCCATTGATGATGGAAAGACGAAGATTTGTATGCAGGCAAGTGACTGCTGGAAGCCA
GCATTATAACGCTTGGCAATAAGGTTAAATTGAGAGAGTTGTTGGGGGCCAGAAACAATA
GGAACCAGCTTGCATGAGATGACATTCTTGACGTAAGGAAGAATATGTATGCTATCACTA
TGTGCTCCAGATAAAATGAAACCAGTCGAATCTGCGGCCGCGAATTCCTCCAGTTGAGTA
CCT
■■Homology search results ■■ -
sp_hit_id Q5FC78
Definition sp|Q5FC78|YQV8_CAEEL Uncharacterized protein F27E5.8 OS=Caenorhabditis elegans
Align length 53
Score (bit) 31.2
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914981|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_B05.
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5FC78|YQV8_CAEEL Uncharacterized protein F27E5.8 OS=Caenorha...    31   2.9  
sp|P21451|EDNRB_RAT Endothelin B receptor OS=Rattus norvegicus G...    30   8.5  
sp|P48302|EDNRB_MOUSE Endothelin B receptor OS=Mus musculus GN=E...    30   8.5  

>sp|Q5FC78|YQV8_CAEEL Uncharacterized protein F27E5.8
           OS=Caenorhabditis elegans GN=F27E5.8 PE=2 SV=1
          Length = 349

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -2

Query: 351 AVTCLHTNLRLSIINGTDKTPQVSRILMLTGFTMEKVVLCVCH---SMKGDSL 202
           + +CLH NLR+ I N       +  ILM  G  M  V LC+ H    M+G SL
Sbjct: 56  STSCLHLNLRILICNCC-----LGFILMAVGRAMIAVPLCIAHLRDVMRGASL 103


>sp|P21451|EDNRB_RAT Endothelin B receptor OS=Rattus norvegicus
           GN=Ednrb PE=2 SV=2
          Length = 442

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 256 YHGKSGPLCM--PFNERRFLAFYTNADSSYSLAHYFC 152
           Y GK   +CM  PF +  F+ FY  A   +  + YFC
Sbjct: 247 YKGKPLRVCMLNPFQKTAFMQFYKTAKDWWLFSFYFC 283


>sp|P48302|EDNRB_MOUSE Endothelin B receptor OS=Mus musculus
           GN=Ednrb PE=2 SV=1
          Length = 442

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 256 YHGKSGPLCM--PFNERRFLAFYTNADSSYSLAHYFC 152
           Y GK   +CM  PF +  F+ FY  A   +  + YFC
Sbjct: 247 YKGKPLRVCMLNPFQKTAFMQFYKTAKDWWLFSFYFC 283
tr_hit_id A5B032
Definition tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 65
Score (bit) 66.6
E-value 7.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914981|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_B05.
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis...    67   7e-10
tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A1...    65   1e-09
tr|Q8L614|Q8L614_ARATH Putative uncharacterized protein At5g6595...    65   1e-09
tr|Q69VK3|Q69VK3_ORYSJ Putative uncharacterized protein OJ1479_B...    59   1e-07
tr|A3AAP1|A3AAP1_ORYSJ Putative uncharacterized protein OS=Oryza...    59   1e-07
tr|A2X8W8|A2X8W8_ORYSI Putative uncharacterized protein OS=Oryza...    59   1e-07
tr|A7BTV4|A7BTV4_9GAMM Putative uncharacterized protein OS=Beggi...    37   0.43 
tr|A4S1A2|A4S1A2_OSTLU Predicted protein OS=Ostreococcus lucimar...    36   0.94 
tr|A0Z485|A0Z485_9GAMM Putative adenylate cyclase OS=marine gamm...    33   8.1  

>tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_007638 PE=4 SV=1
          Length = 962

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 30/65 (46%), Positives = 46/65 (70%)
 Frame = -3

Query: 509  STGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQ 330
            S  F+LSG+H+D+I ++P  ++ +S  LVP+ SG QQL +  + + RY+AGFQ ++A   
Sbjct: 893  SPSFVLSGSHNDTIFVIPKTEHSLSYMLVPLASGSQQLPRVTVTSVRYSAGFQPTIAAST 952

Query: 329  IFVFP 315
            IFVFP
Sbjct: 953  IFVFP 957


>tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A18
            OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1194

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 31/71 (43%), Positives = 46/71 (64%)
 Frame = -3

Query: 500  FILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQIFV 321
            F+LSG+HS+++ +LP  ++V+S KLVP+  G QQL +  L + RY A FQ S     +FV
Sbjct: 1120 FVLSGSHSNTVSVLPKSEHVLSYKLVPLTCGEQQLPKITLTSARYAAEFQPSAVASSVFV 1179

Query: 320  FPSSMAQTKPL 288
            FPS+    K +
Sbjct: 1180 FPSAPQAEKAI 1190


>tr|Q8L614|Q8L614_ARATH Putative uncharacterized protein At5g65950
            OS=Arabidopsis thaliana GN=At5g65950 PE=2 SV=1
          Length = 865

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 31/71 (43%), Positives = 46/71 (64%)
 Frame = -3

Query: 500  FILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQIFV 321
            F+LSG+HS+++ +LP  ++V+S KLVP+  G QQL +  L + RY A FQ S     +FV
Sbjct: 791  FVLSGSHSNTVSVLPKSEHVLSYKLVPLTCGEQQLPKITLTSARYAAEFQPSAVASSVFV 850

Query: 320  FPSSMAQTKPL 288
            FPS+    K +
Sbjct: 851  FPSAPQAEKAI 861


>tr|Q69VK3|Q69VK3_ORYSJ Putative uncharacterized protein
           OJ1479_B12.25-2 (Putative uncharacterized protein
           OJ1191_G08.1-2) OS=Oryza sativa subsp. japonica
           GN=OJ1479_B12.25-2 PE=4 SV=1
          Length = 723

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = -3

Query: 509 STGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQ 330
           S  F+ SGAH+ +  ILP  ++++S KLVP+ SG QQL +  + + RY+A    S +   
Sbjct: 640 SQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAAT 699

Query: 329 IFVFPS 312
           +FV+PS
Sbjct: 700 VFVYPS 705


>tr|A3AAP1|A3AAP1_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_007863 PE=4 SV=1
          Length = 1177

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = -3

Query: 509  STGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQ 330
            S  F+ SGAH+ +  ILP  ++++S KLVP+ SG QQL +  + + RY+A    S +   
Sbjct: 1094 SQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAAT 1153

Query: 329  IFVFPS 312
            +FV+PS
Sbjct: 1154 VFVYPS 1159


>tr|A2X8W8|A2X8W8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_08680 PE=4 SV=1
          Length = 1177

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = -3

Query: 509  STGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQ 330
            S  F+ SGAH+ +  ILP  ++++S KLVP+ SG QQL +  + + RY+A    S +   
Sbjct: 1094 SQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAAT 1153

Query: 329  IFVFPS 312
            +FV+PS
Sbjct: 1154 VFVYPS 1159


>tr|A7BTV4|A7BTV4_9GAMM Putative uncharacterized protein
           OS=Beggiatoa sp. PS GN=BGP_1161 PE=4 SV=1
          Length = 630

 Score = 37.4 bits (85), Expect = 0.43
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
 Frame = -1

Query: 316 HHQWHRQNPSSFSHLNAYWFYHGKSGPLCM-------PFNERR--FLAFYTNADSSYSLA 164
           HHQ    NP+S SH   Y  Y  KSG L +        FN ++  F+ +  +A++S SL+
Sbjct: 463 HHQHDENNPASLSHNEVYAIYEDKSGSLWIGTLGGLNQFNAKQGTFVHYQYDANNSNSLS 522

Query: 163 H 161
           H
Sbjct: 523 H 523


>tr|A4S1A2|A4S1A2_OSTLU Predicted protein OS=Ostreococcus lucimarinus
            (strain CCE9901) GN=OSTLU_87978 PE=4 SV=1
          Length = 1092

 Score = 36.2 bits (82), Expect = 0.94
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = -3

Query: 509  STGFILSGAHSDSIHILPYVKNVISCKLVPIVSGPQQLSQFNLIAKRYNAGFQQSLACIQ 330
            STGF+ +G    ++++ P         LVPIV+G   L + +L A+R++A F   +   +
Sbjct: 1026 STGFVFAGIKRGTMYVPPLSTASFYFLLVPIVTGSAILPELSLGAERFSATFVPPIESRR 1085

Query: 329  IFVFP 315
            + V P
Sbjct: 1086 VIVRP 1090


>tr|A0Z485|A0Z485_9GAMM Putative adenylate cyclase OS=marine gamma
           proteobacterium HTCC2080 GN=MGP2080_09753 PE=4 SV=1
          Length = 946

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 355 SSSHLPAYKSSSFHHQWHRQNPSSFSHLNAYWFYHG-KSGPLCMPFNERRF-LAFYTNAD 182
           +S+ +P Y+ +      +  +PS F  LNA W YH     P  +P  ER+  LA   N D
Sbjct: 616 ASAAVPEYERAMNLCNDYPDSPSLFYALNAVWSYHAMHCSPAALPLVERQLTLAEQLNYD 675

Query: 181 SSYSLA 164
           +++ LA
Sbjct: 676 TTHVLA 681