BP914990 |
Clone id |
YMU001_000065_C02 |
Library |
YMU01 |
Length |
600 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_C02. |
Accession |
BP914990 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAAATTTACAAATTCATGTTTGCACTGTGGAAAATTTGGACGCATGCAATCTGAATGTTC CGAGTCTATTTTGCAACCTCCTCCTTTAGTTGTCCCTCAGCTTGCGGTTTCTAATGAGAG AGAAGTCCTTAATCCCAAATTTGCCATTGTTGCGGCCTCTACATCGCCTGATGCCTTACA TGTGGATAAAGGCAAGGTTAAACCTGCTGCTTCCCCAAATCTTCCGAGTAAAGGAAAGGT GGTATCTACTCCTGTAACCAAAAACAAAGGGAAAAATGTGGACTCAATGGAAGGATTTCC TTGGGTAACCCCCAAGAAGACTGTCAAGATGCATTCACAGCTTTCTTCTCCTAATTATGT ACTTCTTGAAGTAAAATCTACGGGGCAAAAACCTCTTCCTTGTAATGATAATCGCACTCT TGCGGATGTATGGGATAACGTGGTGCACTCTTACAGGGATGCAATGGTTTATGGAACTTT TCAAGCACCGTCTCTGAGACAGGCATACAGAACATAGTGGTTAAGTTGCGGGCTACTGAT GTNGATGTGCTTATGGACACGTCAACTTAGTCCTCTCCTTACTTTGCCTATGCATATATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P28290 |
Definition |
sp|P28290|SSFA2_HUMAN Sperm-specific antigen 2 OS=Homo sapiens |
Align length |
126 |
Score (bit) |
34.3 |
E-value |
0.49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BLI4 |
Definition |
tr|A5BLI4|A5BLI4_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
126 |
Score (bit) |
38.5 |
E-value |
0.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914990|Adiantum capillus-veneris mRNA, clone: YMU001_000065_C02. (600 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BLI4|A5BLI4_VITVI Putative uncharacterized protein OS=Vitis... 39 0.30 tr|B3L3I8|B3L3I8_PLAKH Putative uncharacterized protein OS=Plasm... 38 0.39 tr|A5BZ13|A5BZ13_VITVI Putative uncharacterized protein OS=Vitis... 37 0.67 tr|B2TRB3|B2TRB3_CLOBB Oligo-1,6-glucosidase OS=Clostridium botu... 35 3.3 tr|Q8JHA7|Q8JHA7_XENLA Glutathione s-transferase OS=Xenopus laev... 34 5.6 tr|Q7SZA7|Q7SZA7_XENLA XlGSTS1-1 protein OS=Xenopus laevis GN=pg... 34 5.6 tr|Q501R0|Q501R0_XENLA Putative uncharacterized protein OS=Xenop... 34 5.6 tr|Q3U4Y0|Q3U4Y0_MOUSE Putative uncharacterized protein OS=Mus m... 34 5.6 tr|B1TGR7|B1TGR7_9BURK Group II intron-encoding maturase OS=Burk... 34 5.6 tr|B4E2E5|B4E2E5_HUMAN cDNA FLJ56289, highly similar to Homo sap... 34 5.6 tr|B4DQT6|B4DQT6_HUMAN cDNA FLJ52859, highly similar to Sperm-sp... 34 5.6 tr|B4DP45|B4DP45_HUMAN cDNA FLJ55121, highly similar to Homo sap... 34 5.6 tr|B3KXT1|B3KXT1_HUMAN cDNA FLJ45996 fis, clone SKNSH2007306, hi... 34 5.6 tr|A8K6T0|A8K6T0_HUMAN cDNA FLJ77416, highly similar to Homo sap... 34 5.6 tr|A8JCT8|A8JCT8_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 5.7 tr|A6F8M3|A6F8M3_9GAMM Putative nitrilase OS=Moritella sp. PE36 ... 34 7.4 tr|B6R1B4|B6R1B4_9RHOB Primosomal protein N` (Replication factor... 33 9.6 tr|B4HCZ6|B4HCZ6_DROPE GL24186 OS=Drosophila persimilis GN=GL241... 33 9.6
>tr|A5BLI4|A5BLI4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001396 PE=4 SV=1 Length = 1507
Score = 38.5 bits (88), Expect = 0.30 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Frame = +2
Query: 2 KFTNSCLHCGKFGRMQSECSESIXXXXXXXXXXXAVSNEREVLNPKFAIVAASTSPDALH 181 K T C HC K G +S C E + + E V A++ A+ D + Sbjct: 243 KSTFKCTHCNKTGHTKSRCFEIV----GYPDCYCEIKTEANVDEKASALIVATDYSDHMT 298
Query: 182 VDKGKVKPAASPNLPSKGKVVSTPVTKNKGKNVDSMEGFPWVTPKKTVKMHSQLSSP--N 355 D +V PA PS K VST N + G +T T+ + S L +P N Sbjct: 299 FDSRQVSPAR----PSSQKFVST-----ANGNTTPIIGEGSLTLTDTLNLDSILVAPSLN 349
Query: 356 YVLLEV 373 Y LL V Sbjct: 350 YNLLSV 355
>tr|B3L3I8|B3L3I8_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H) GN=PKH_080440 PE=4 SV=1 Length = 737
Score = 38.1 bits (87), Expect = 0.39 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 22/129 (17%) Frame = +2
Query: 188 KGKVKPAASPNLPSKGKVVSTPVTKNKGKNV----DSMEGFPWVTPKKTVKMHSQLSSPN 355 +G V A++ N + GK+V +PV +N + V D++ G+ ++ P +K+ P+ Sbjct: 413 RGSVNHASAANSQANGKLVRSPVGQNPRREVVSPGDTLLGYMYIVPYMEIKIRDYFRVPS 472
Query: 356 -------------YVLLEVKSTGQKPL-----PCNDNRTLADVWDNVVHSYRDAMVYGTF 481 +V+L+ K G P+ C++ TL + + H + YG + Sbjct: 473 MNCLSNTCLIFTGHVVLDYKFIGTLPIEKKLFSCSEILTLFHEFGHAYHLLLLSRKYGLY 532
Query: 482 QAPSLRQAY 508 Q ++ Y Sbjct: 533 QFSNMPLDY 541
>tr|A5BZ13|A5BZ13_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016830 PE=4 SV=1 Length = 1377
Score = 37.4 bits (85), Expect = 0.67 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = +2
Query: 215 PNLPSKGKVVSTPVTKNKGKNVDSMEG---FPWVTPKKTVKMHSQLSSPNYVLLEVKSTG 385 PNLPS+ V VT ++G VDS G ++PKK K+H LSS L++K T Sbjct: 612 PNLPSE---VPNLVTVSQGDVVDSPSGDFQIEGLSPKKMAKVHEVLSS-----LDIKET- 662
Query: 386 QKPLPCNDNRTLADVW 433 K + C D R + VW Sbjct: 663 -KKVEC-DRRFVGSVW 676
>tr|B2TRB3|B2TRB3_CLOBB Oligo-1,6-glucosidase OS=Clostridium botulinum (strain Eklund 17B / type B) GN=CLL_A3534 PE=4 SV=1 Length = 555
Score = 35.0 bits (79), Expect = 3.3 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Frame = +2
Query: 248 TPVTKNKGKNVDSMEGFPWVTPK---KTVKMHSQLSSPNYVLLEVKSTGQKPLPCNDNRT 418 TP N GKN EG PW+T K + SQ+S N V+ S +K + + Sbjct: 419 TPFHWNNGKNAGFTEGKPWITINENYKHINAESQISDENSVI----SFYKKLIKLRKS-- 472
Query: 419 LADVWDNVVHSYRDAMVYGTFQAPSLRQ 502 ++DA+VYG F+ P+L Q Sbjct: 473 ---------DEFKDAIVYGEFK-PTLEQ 490
>tr|Q8JHA7|Q8JHA7_XENLA Glutathione s-transferase OS=Xenopus laevis PE=2 SV=1 Length = 194
Score = 34.3 bits (77), Expect = 5.6 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +2
Query: 281 DSMEGFPWVTPKKTVKMHSQLSSPNYVLLEVKSTGQKPLPCNDNRTLAD-VWDNVVHSY 454 D FPW+ +K K + SSP + K+ G P D+ T AD WD S+ Sbjct: 97 DFFSKFPWMDTEKAKKEFMEKSSPQLLAYLEKTLGNNPWFVGDSATWADFFWDTCADSF 155
>tr|Q7SZA7|Q7SZA7_XENLA XlGSTS1-1 protein OS=Xenopus laevis GN=pgds PE=2 SV=1 Length = 197
Score = 34.3 bits (77), Expect = 5.6 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +2
Query: 281 DSMEGFPWVTPKKTVKMHSQLSSPNYVLLEVKSTGQKPLPCNDNRTLAD-VWDNVVHSY 454 D FPW+ +K K + SSP + K+ G P D+ T AD WD S+ Sbjct: 97 DFFSKFPWMDTEKAKKEFMEKSSPQLLAYLEKTLGNNPWFVGDSATWADFFWDTCADSF 155
>tr|Q501R0|Q501R0_XENLA Putative uncharacterized protein OS=Xenopus laevis PE=2 SV=1 Length = 194
Score = 34.3 bits (77), Expect = 5.6 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +2
Query: 107 VSNEREVLNPKFAIVAA-STSPDALHVDKGKVKPAASPNLPSKGKVVST-PVTKNKGKNV 280 V+ ++ PK A A S P A V K K KPAA+P K KVV PV +K K Sbjct: 117 VATPKKAAKPKKAASKAPSKKPKATPVKKAKKKPAATPKKAKKPKVVKVKPVKASKPKKA 176
Query: 281 DSME 292 +++ Sbjct: 177 KTVK 180
>tr|Q3U4Y0|Q3U4Y0_MOUSE Putative uncharacterized protein OS=Mus musculus GN=H1f0 PE=2 SV=1 Length = 194
Score = 34.3 bits (77), Expect = 5.6 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +2
Query: 107 VSNEREVLNPKFAIVAA-STSPDALHVDKGKVKPAASPNLPSKGKVVST-PVTKNKGKNV 280 V+ ++ PK A A S P A V K K KPAA+P K KVV PV +K K Sbjct: 117 VATPKKAAKPKKAASKAPSKKPKATPVKKAKKKPAATPKKAKKPKVVKVKPVKASKPKKA 176
Query: 281 DSME 292 +++ Sbjct: 177 KTVK 180
>tr|B1TGR7|B1TGR7_9BURK Group II intron-encoding maturase OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_6983 PE=4 SV=1 Length = 220
Score = 34.3 bits (77), Expect = 5.6 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%) Frame = +2
Query: 233 GKVVSTP-VTKNKGKNVDSMEGFPWVTPKKTVKMHSQLSSPNYVLLEV------KSTG-Q 388 GK+++ VT+NKGK ++G W TP +K L Y L + KS G + Sbjct: 69 GKLLAVKRVTENKGKRTAGVDGKIWSTPASKLKAVQSLGFRGYRPLPLRRVYIPKSNGKE 128
Query: 389 KPL--PCNDNRTLADVW 433 +PL PC +R + +W Sbjct: 129 RPLGIPCMRDRAMQALW 145
>tr|B4E2E5|B4E2E5_HUMAN cDNA FLJ56289, highly similar to Homo sapiens sperm specific antigen 2 (SSFA2), mRNA OS=Homo sapiens PE=2 SV=1 Length = 1084
Score = 34.3 bits (77), Expect = 5.6 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Frame = +2
Query: 134 PKFAIVAASTSPDALHVDKGKVKPAASPNLPSKGKVVSTPVTKNKGKNVDSMEGFPWVT- 310 P A V S +P + A +P PS+ V TP + VD+ EG P V Sbjct: 955 PSTASVGKSKTPLVARKKVFRASVALTPTAPSRTGSVQTPPDLESSEEVDAAEGAPEVVG 1014
Query: 311 PKKTVKM-HSQLSSPNYVLLEVKSTGQKPLPCNDNRTLADVWDNVVHSYRDAMVYGTFQA 487 PK V+ H +L S K+ Q L + + ++ +++V R +V G A Sbjct: 1015 PKSEVEEGHGKLPSMPAAEEMHKNVEQDEL----QQVIREIKESIVGEIRREIVSGLLAA 1070
Query: 488 PSLRQA 505 S +A Sbjct: 1071 VSSSKA 1076
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