BP914991
Clone id YMU001_000065_C03
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGGGACTTTTAGTGGGAGGCCTCATCAAACACTGCTTGATTAACGGTCCTGGGGTAACA
GTTTGTTTGAAGATTTTTATGATGAAGTGAGCAACTGTTTGCTTGGATGGCTCACCTTTA
CTGAGAAATGGAAAATCTCAGGTTACATGGTGCGTCAACATCTAAACAGATTCAGAGAGC
CATAGGGTCTGATGAATGAGACATACCATGTATCAAGCAATGTTCCCCCCTCTGCATTAC
GTGCAGCTCCGAATGGGTTCAACGACGTTTGGAACGCATATGCAGCCTGTGAAAGAGAAA
ACTGATTGGCCCAGACCTGCTTGGCTTTATGTATCTGGCCTCACAGCATTTTGAAGTTAC
GCTACTGACCAATGTTTCCTCGGGAGTGAGAGATTACTGCCGACTGAATCACAAGAAGCC
GGCTGACTGTGATTACGATCATCTCTCTACCATGGTTTGAGTGTCCTGGGAAA
■■Homology search results ■■ -
sp_hit_id Q2LK54
Definition sp|Q2LK54|COL12_CHICK Collectin-12 OS=Gallus gallus
Align length 29
Score (bit) 31.6
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914991|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_C03.
(473 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2LK54|COL12_CHICK Collectin-12 OS=Gallus gallus GN=COLEC12 P... 32 1.9
sp|Q6AXQ0|SAE1_RAT SUMO-activating enzyme subunit 1 OS=Rattus no... 30 4.2
sp|Q90Z16|OPTN_CHICK Optineurin OS=Gallus gallus GN=OPTN PE=1 SV=1 30 5.4
sp|Q61333|TNAP2_MOUSE Tumor necrosis factor, alpha-induced prote... 30 7.1
sp|P80202|ACV1B_RAT Activin receptor type-1B OS=Rattus norvegicu... 30 7.1
sp|Q61271|ACV1B_MOUSE Activin receptor type-1B OS=Mus musculus G... 30 7.1
sp|P36896|ACV1B_HUMAN Activin receptor type-1B OS=Homo sapiens G... 30 7.1
sp|Q9Z852|Y499_CHLPN Uncharacterized protein CPn_0499/CP_0255/CP... 29 9.3

>sp|Q2LK54|COL12_CHICK Collectin-12 OS=Gallus gallus GN=COLEC12 PE=2
SV=1
Length = 742

Score = 31.6 bits (70), Expect = 1.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3

Query: 105 QANSCSLHHKNLQTNCYPRTVNQAVFDEA 19
+AN CS H KN CY ++ + +F+EA
Sbjct: 603 EANGCSPHWKNYTEKCYYFSIEREIFEEA 631


>sp|Q6AXQ0|SAE1_RAT SUMO-activating enzyme subunit 1 OS=Rattus
norvegicus GN=Sae1 PE=2 SV=1
Length = 349

Score = 30.4 bits (67), Expect = 4.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +2

Query: 230 LCITCSSEWVQRRLERICSL*KRKLIGPDLLG-----FMYLASQHF--EVTLLTNVSSGV 388
+C+TC S+ V ++++IC K D+ G F L F E T +T VS GV
Sbjct: 132 VCLTCCSKDVIIKVDQICHRNSIKFFTGDVFGYHGYTFANLGEHEFVEEKTKVTKVSQGV 191

Query: 389 RD 394
D
Sbjct: 192 ED 193


>sp|Q90Z16|OPTN_CHICK Optineurin OS=Gallus gallus GN=OPTN PE=1 SV=1
Length = 556

Score = 30.0 bits (66), Expect = 5.4
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2

Query: 89 EQLFAWMAHLY*EMENLRLHGASTSKQIQRAIGSDE*DIPCIKQCSPLCI---TCSSEWV 259
EQL +A+L E +NL G S+ ++Q G+ D ++ SP + T S EW
Sbjct: 469 EQLAVQLAYLLKEQQNLEDLGRSSLAEMQNRHGARAPD----REHSPRLVQRGTGSQEWP 524

Query: 260 QRRLERICSL*KRKLIGPDL 319
++R I S K + I PDL
Sbjct: 525 EQRNISIYSCPKCEEILPDL 544


>sp|Q61333|TNAP2_MOUSE Tumor necrosis factor, alpha-induced protein
2 OS=Mus musculus GN=Tnfaip2 PE=2 SV=1
Length = 650

Score = 29.6 bits (65), Expect = 7.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3

Query: 87 VSNCLLGWLTFTEKWKISGYMVRQHLNRFREP 182
++NCL W + +KW+IS LNR EP
Sbjct: 422 INNCLFFWTSVEQKWQIS----HDSLNRLLEP 449


>sp|P80202|ACV1B_RAT Activin receptor type-1B OS=Rattus norvegicus
GN=Acvr1b PE=2 SV=1
Length = 505

Score = 29.6 bits (65), Expect = 7.1
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = -2

Query: 430 TVSRLLVIQSAVISHSRGNIGQ*RNFKML*GQI------HKAKQVWANQFSLSQAAYAFQ 269
TV+R +V+Q + +G G+ + G + + ++ W + + Q
Sbjct: 202 TVARTIVLQEII---GKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRH 258

Query: 268 TSLNPFGAARNAEGGTLLDTWYVSFIRPYGSL 173
++ F AA N + GT W VS +GSL
Sbjct: 259 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSL 290


>sp|Q61271|ACV1B_MOUSE Activin receptor type-1B OS=Mus musculus
GN=Acvr1b PE=1 SV=1
Length = 505

Score = 29.6 bits (65), Expect = 7.1
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = -2

Query: 430 TVSRLLVIQSAVISHSRGNIGQ*RNFKML*GQI------HKAKQVWANQFSLSQAAYAFQ 269
TV+R +V+Q + +G G+ + G + + ++ W + + Q
Sbjct: 202 TVARTIVLQEII---GKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRH 258

Query: 268 TSLNPFGAARNAEGGTLLDTWYVSFIRPYGSL 173
++ F AA N + GT W VS +GSL
Sbjct: 259 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSL 290


>sp|P36896|ACV1B_HUMAN Activin receptor type-1B OS=Homo sapiens
GN=ACVR1B PE=1 SV=1
Length = 505

Score = 29.6 bits (65), Expect = 7.1
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = -2

Query: 430 TVSRLLVIQSAVISHSRGNIGQ*RNFKML*GQI------HKAKQVWANQFSLSQAAYAFQ 269
TV+R +V+Q + +G G+ + G + + ++ W + + Q
Sbjct: 202 TVARTIVLQEII---GKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRH 258

Query: 268 TSLNPFGAARNAEGGTLLDTWYVSFIRPYGSL 173
++ F AA N + GT W VS +GSL
Sbjct: 259 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSL 290


>sp|Q9Z852|Y499_CHLPN Uncharacterized protein
CPn_0499/CP_0255/CPj0499/CpB0519 OS=Chlamydia pneumoniae
GN=CPn_0499 PE=3 SV=2
Length = 385

Score = 29.3 bits (64), Expect = 9.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3

Query: 33 LLD*RSWGNSLFEDFYDEVSNCLLGWLTFTEKWKISG 143
LLD SLF F E+ NCL W + T + + G
Sbjct: 94 LLDDLKGAQSLFTSFQSELKNCLPAWKSSTRRLETRG 130


tr_hit_id A0QQP4
Definition tr|A0QQP4|A0QQP4_MYCS2 Immunogenic protein MPT63 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Align length 38
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914991|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_C03.
(473 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0QQP4|A0QQP4_MYCS2 Immunogenic protein MPT63 OS=Mycobacteriu... 33 7.1
tr|Q84L69|Q84L69_HEVBR P66 protein OS=Hevea brasiliensis GN=P66 ... 33 9.3

>tr|A0QQP4|A0QQP4_MYCS2 Immunogenic protein MPT63 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_0828
PE=4 SV=1
Length = 356

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2

Query: 298 SLSQAAYAFQTSLNPFGAARNAEGGTLLDTWYVSFIRP 185
+ ++AA A Q S NP G+ E G ++ W +S ++P
Sbjct: 28 AFAEAAQAAQVSANPLGSQARLENGDVVQAWTISDLKP 65


>tr|Q84L69|Q84L69_HEVBR P66 protein OS=Hevea brasiliensis GN=P66
PE=2 SV=1
Length = 527

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3

Query: 39 D*RSWGNSLFEDFYDEVSNCLLGWLTFTEKWKISGY 146
D R + + LFE F D V + W+TF E W +SG+
Sbjct: 171 DFREYADLLFERFGDRVKH----WMTFNEPWALSGF 202