BP914992 |
Clone id |
YMU001_000065_C04 |
Library |
YMU01 |
Length |
453 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_C04. |
Accession |
BP914992 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTTTTTTTTTTTTCCACAGAAATTTGTGTTAAAAATAGACCTATGTACATATTTGT GTCATTATTCTGGCGCTATACTTAGCTTCTACTATAGCTTTTGCACAAGTGCAAAATACA TTCTTGCCTCTGATCTACAAAGTAAGTAAACAATGGATAAATTCTGTATTCTGTATGCCG TGTTGGTATTCCCTACGCTGTGTTCCTAAGTCTTGAAATGGTGGCTAAGGTTCAGTATGA AGATAAATGCAGGATAACTAACCAGGTCCTATGATAAATCAAAGGACCCTTGACCTTCCT GTATAGCGTACAATAACCGTTCCAACATAACCTCCTTGCAAGAATATGGAGGTAGCTTTA AATAATTGGCACAAGTCATCACGCTTGGCAAATCCCCATCCACAAATGTAGCATATGATC CAGGAGATACGTCCCCACTTGCTCCACTAGGTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6WWW4 |
Definition |
sp|Q6WWW4|UPL3_ARATH E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana |
Align length |
43 |
Score (bit) |
78.6 |
E-value |
1.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9STB1 |
Definition |
tr|A9STB1|A9STB1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
61 |
Score (bit) |
89.4 |
E-value |
8.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914992|Adiantum capillus-veneris mRNA, clone: YMU001_000065_C04. (436 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9STB1|A9STB1_PHYPA Predicted protein OS=Physcomitrella paten... 89 8e-17 tr|B8LKY6|B8LKY6_PICSI Putative uncharacterized protein OS=Picea... 88 2e-16 tr|A9TM27|A9TM27_PHYPA Predicted protein (Fragment) OS=Physcomit... 87 3e-16 tr|Q00Y47|Q00Y47_OSTTA HECT-domain-containing protein / ubiquiti... 84 4e-15 tr|A4S5H1|A4S5H1_OSTLU Predicted protein OS=Ostreococcus lucimar... 84 4e-15 tr|A7P8B1|A7P8B1_VITVI Chromosome chr3 scaffold_8, whole genome ... 80 4e-14 tr|O24402|O24402_WHEAT Tap (Fragment) OS=Triticum aestivum PE=2 ... 79 1e-13 tr|B3H700|B3H700_ARATH Uncharacterized protein At4g38600.2 OS=Ar... 79 1e-13 tr|Q6YU89|Q6YU89_ORYSJ Putative HECT ubiquitin-protein ligase 3 ... 78 3e-13 tr|Q0E4T3|Q0E4T3_ORYSJ Os02g0101700 protein (Fragment) OS=Oryza ... 78 3e-13 tr|A7QDT6|A7QDT6_VITVI Chromosome chr4 scaffold_83, whole genome... 77 4e-13 tr|A8I5Z4|A8I5Z4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 76 7e-13 tr|A7PSS0|A7PSS0_VITVI Chromosome chr8 scaffold_29, whole genome... 75 2e-12 tr|Q60EQ3|Q60EQ3_ORYSJ Putative uncharacterized protein OJ1280_A... 74 5e-12 tr|Q0DHI3|Q0DHI3_ORYSJ Os05g0463900 protein (Fragment) OS=Oryza ... 74 5e-12 tr|B8AZ12|B8AZ12_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A3B4V4|A3B4V4_ORYSJ Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A3A253|A3A253_ORYSJ Putative uncharacterized protein OS=Oryza... 71 2e-11 tr|A2WZR6|A2WZR6_ORYSI Putative uncharacterized protein OS=Oryza... 71 2e-11 tr|A9UTU0|A9UTU0_MONBE Predicted protein OS=Monosiga brevicollis... 65 1e-09 tr|Q5DF45|Q5DF45_SCHJA SJCHGC09553 protein OS=Schistosoma japoni... 64 5e-09 tr|A8N9T2|A8N9T2_COPC7 Putative uncharacterized protein OS=Copri... 64 5e-09 tr|Q75DK8|Q75DK8_ASHGO ABR013Wp OS=Ashbya gossypii GN=ABR013W PE... 63 6e-09 tr|A1CTM1|A1CTM1_ASPCL Ubiquitin-protein ligase Ufd4, putative O... 63 6e-09 tr|Q75L91|Q75L91_ORYSJ Putative uncharacterized protein OJ1729_E... 62 1e-08 tr|Q0DL56|Q0DL56_ORYSJ Os05g0122400 protein OS=Oryza sativa subs... 62 1e-08 tr|B8AXD1|B8AXD1_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|A2ZRQ5|A2ZRQ5_ORYSJ Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|B6JZ75|B6JZ75_SCHJP Ubiquitin fusion degradation protein OS=S... 62 1e-08 tr|B4XH13|B4XH13_SOYBN Putative HECT ubiquitin-protein ligase 3 ... 61 2e-08
>tr|A9STB1|A9STB1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188237 PE=4 SV=1 Length = 767
Score = 89.4 bits (220), Expect = 8e-17 Identities = 45/61 (73%), Positives = 47/61 (77%), Gaps = 4/61 (6%) Frame = -3
Query: 425 ASGDVSPGSYA----TFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDL 258 A G PG+ A T D DLPSVMTCANYLKLPPYSCKE+M ERLLYAI EGQGSFDL Sbjct: 707 ALGSTPPGAAAGMGTTLADRDLPSVMTCANYLKLPPYSCKEIMRERLLYAIHEGQGSFDL 766
Query: 257 S 255 S Sbjct: 767 S 767
>tr|B8LKY6|B8LKY6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 656
Score = 88.2 bits (217), Expect = 2e-16 Identities = 44/59 (74%), Positives = 49/59 (83%) Frame = -3
Query: 431 SGASGDVSPGSYATFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 +GA+G + + AT D DLPSVMTCANYLKLPPYSCKEVM ERL+YAI EGQGSFDLS Sbjct: 600 TGANGGIKGTAQAT--DRDLPSVMTCANYLKLPPYSCKEVMRERLMYAITEGQGSFDLS 656
>tr|A9TM27|A9TM27_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_147629 PE=4 SV=1 Length = 781
Score = 87.4 bits (215), Expect = 3e-16 Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 4/59 (6%) Frame = -3
Query: 419 GDVSPGSYA----TFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 G PG+ A T D DLPSVMTCANYLKLPPYSCKE+M +RLLYAI EGQGSFDLS Sbjct: 723 GSTPPGALAGLGTTLADKDLPSVMTCANYLKLPPYSCKEIMRKRLLYAIHEGQGSFDLS 781
>tr|Q00Y47|Q00Y47_OSTTA HECT-domain-containing protein / ubiquitin-transferase family protein / armadillo/beta-cateni (ISS) OS=Ostreococcus tauri GN=Ot12g01130 PE=4 SV=1 Length = 1477
Score = 84.0 bits (206), Expect = 4e-15 Identities = 42/59 (71%), Positives = 47/59 (79%) Frame = -3
Query: 431 SGASGDVSPGSYATFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 S SG++S G+ DGDLPS MTCA+YLKLPPYSCKEVM ERL YA+ EGQGSFDLS Sbjct: 1421 SSDSGNLSAGT--PLADGDLPSAMTCASYLKLPPYSCKEVMAERLRYAMCEGQGSFDLS 1477
>tr|A4S5H1|A4S5H1_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_39499 PE=4 SV=1 Length = 520
Score = 84.0 bits (206), Expect = 4e-15 Identities = 41/58 (70%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = -3
Query: 425 ASGDVSPGSYAT-FVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 +S D +P + T DGDLPS MTCA+YLKLPPYSCKE+MLERL YA+ EGQGSFDLS Sbjct: 463 SSIDSAPVAAGTPLADGDLPSAMTCASYLKLPPYSCKEIMLERLTYAMSEGQGSFDLS 520
>tr|A7P8B1|A7P8B1_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036114001 PE=4 SV=1 Length = 1049
Score = 80.5 bits (197), Expect = 4e-14 Identities = 40/59 (67%), Positives = 45/59 (76%) Frame = -3
Query: 431 SGASGDVSPGSYATFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 + A+G P A D DLPSVMTCANYLKLPPYS KE+M ++LLYAI EGQGSFDLS Sbjct: 994 TAANGSSGPSESA---DDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAISEGQGSFDLS 1049
>tr|O24402|O24402_WHEAT Tap (Fragment) OS=Triticum aestivum PE=2 SV=1 Length = 94
Score = 78.6 bits (192), Expect = 1e-13 Identities = 38/60 (63%), Positives = 43/60 (71%) Frame = -3
Query: 434 PSGASGDVSPGSYATFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 PS ++ D DLPSVMTCANYLKLPPYS KEVM ++LLYAI EG+GSFDLS Sbjct: 35 PSSGVSSLNTSGVTDAADDDLPSVMTCANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS 94
>tr|B3H700|B3H700_ARATH Uncharacterized protein At4g38600.2 OS=Arabidopsis thaliana GN=At4g38600 PE=4 SV=1 Length = 1794
Score = 78.6 bits (192), Expect = 1e-13 Identities = 36/43 (83%), Positives = 39/43 (90%) Frame = -3
Query: 383 DGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 D DLPSVMTCANYLKLPPYS KE+M ++LLYAI EGQGSFDLS Sbjct: 1752 DDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 1794
>tr|Q6YU89|Q6YU89_ORYSJ Putative HECT ubiquitin-protein ligase 3 OS=Oryza sativa subsp. japonica GN=B1370C05.20 PE=4 SV=1 Length = 1781
Score = 77.8 bits (190), Expect = 3e-13 Identities = 39/60 (65%), Positives = 43/60 (71%) Frame = -3
Query: 434 PSGASGDVSPGSYATFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 PS A + D DLPSVMTCANYLKLPPYS KEVM ++LLYAI EG+GSFDLS Sbjct: 1722 PSSAVNTSNIAGVTESADDDLPSVMTCANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS 1781
>tr|Q0E4T3|Q0E4T3_ORYSJ Os02g0101700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0101700 PE=4 SV=1 Length = 718
Score = 77.8 bits (190), Expect = 3e-13 Identities = 39/60 (65%), Positives = 43/60 (71%) Frame = -3
Query: 434 PSGASGDVSPGSYATFVDGDLPSVMTCANYLKLPPYSCKEVMLERLLYAIQEGQGSFDLS 255 PS A + D DLPSVMTCANYLKLPPYS KEVM ++LLYAI EG+GSFDLS Sbjct: 659 PSSAVNTSNIAGVTESADDDLPSVMTCANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS 718
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