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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914996
Clone id YMU001_000065_C08
Library
Length 293
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATATAGATCATCTAGACTTGGCTCGTCGAGGTTGATTACCTCAAGTCTTTCTGCATTGAT
ATACGTAGGAATGTCCATGTATACTTGGAGAGGCTCTTCAATTAAAGAATAATCCTTGAG
AGATGGTAATGTGTCACCCTCTATCCTCTGTCGCCTCATTTCACTGCATGCTTTCCTGTA
TAGTTCTTGCTCCTCATGGTTTGCTATTCTTGAACAATTGGAGAGGAAATCAATAGCTGC
TCGCTGCCTGTCATCATCTCTACATTCTCCTTCATCCTCTTCGTCATTAGAGT
■■Homology search results ■■ -
sp_hit_id P25131
Definition sp|P25131|VG424_BPPF1 46.5 kDa protein OS=Pseudomonas phage Pf1
Align length 56
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914996|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_C08.
         (269 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25131|VG424_BPPF1 46.5 kDa protein OS=Pseudomonas phage Pf1 ...    32   1.3  
sp|A5DQN2|SET5_PICGU Potential protein lysine methyltransferase ...    31   1.7  
sp|A3N1F9|METE_ACTP2 5-methyltetrahydropteroyltriglutamate--homo...    29   6.4  
sp|Q92547|TOPB1_HUMAN DNA topoisomerase 2-binding protein 1 OS=H...    29   8.4  
sp|Q08696|MST2_DROHY Axoneme-associated protein mst101(2) OS=Dro...    29   8.4  
sp|Q20FQ1|CYB_LEPST Cytochrome b OS=Lepilemur septentrionalis GN...    29   8.4  

>sp|P25131|VG424_BPPF1 46.5 kDa protein OS=Pseudomonas phage Pf1
           PE=4 SV=1
          Length = 424

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
 Frame = -3

Query: 144 IEGDTLPSLKDYSLI---------EEPLQVYMDIPTYINAERLEVINLDEPSLDDL 4
           I+ D +P+LKD  +I         E   QV+ D+P        E+INLD  SL+DL
Sbjct: 19  IQDDAVPALKDGRVIITNVRGFTLERAYQVFPDLPN-----TAEIINLDLESLEDL 69


>sp|A5DQN2|SET5_PICGU Potential protein lysine methyltransferase
           SET5 OS=Pichia guilliermondii GN=SET5 PE=3 SV=2
          Length = 483

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = -3

Query: 228 FLSNCSRIANHEEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYMDIPTYINAE 49
           F+ +C R  +  ++   RK+ + M  + +  +    LKD        ++ ++IPT    E
Sbjct: 408 FICSCQRCKDEAKEHHRRKSSNGMGAKEVPSNIREMLKDTKSAIGNSEIELEIPTVQGGE 467

Query: 48  RLEVINLDE 22
           R + +  DE
Sbjct: 468 RRKSVRFDE 476


>sp|A3N1F9|METE_ACTP2
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase OS=Actinobacillus pleuropneumoniae
           serotype 5b (strain L20) GN=metE PE=3 SV=1
          Length = 757

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = -3

Query: 111 YSLIEEPLQVYMDIPTYINAERLEVINLDEPSL 13
           + L+++ + +Y +I T + AE +E I +DEP+L
Sbjct: 176 FDLLKQLVPIYFEILTALAAEGVEWIQIDEPAL 208


>sp|Q92547|TOPB1_HUMAN DNA topoisomerase 2-binding protein 1 OS=Homo
           sapiens GN=TOPBP1 PE=1 SV=2
          Length = 1522

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 90  EALQLKNNP*EMVMCHPLSSVASFHC-MLSCIVLAPHGLLF 209
           EAL++K N   + +C P S V   H   L C ++ P  ++F
Sbjct: 46  EALKIKENDRSLYICDPFSGVVFDHLKKLGCRIVGPQVVIF 86


>sp|Q08696|MST2_DROHY Axoneme-associated protein mst101(2)
           OS=Drosophila hydei GN=mst101(2) PE=1 SV=1
          Length = 1391

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -3

Query: 267 ECRDDDRQRAAIDFLSNCSRIANHEEQELYRKACSEMRRQRIEGD 133
           +C+D  R+         C+ +A  +++E  +KAC E+ +++ E D
Sbjct: 334 KCKDLGRKMKEEAEKKKCAALAKKQKEEDEKKACKELAKKKKEAD 378


>sp|Q20FQ1|CYB_LEPST Cytochrome b OS=Lepilemur septentrionalis
           GN=MT-CYB PE=3 SV=1
          Length = 379

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 32  LITSSLSALIYVGMSMYTWRGSSIKE*SLRDGNVSPSILCRLISLHAFLYSSCSSWFAI 208
           +IT+ LSA+ Y+G  +  W             +VS + L R  +LH  L    S+W  I
Sbjct: 145 VITNLLSAIPYIGTDLVEWIWGGF--------SVSKATLTRFFALHFILPFIISAWVMI 195
tr_hit_id Q9TYS1
Definition tr|Q9TYS1|Q9TYS1_CAEEL Putative uncharacterized protein D1037.1 OS=Caenorhabditis elegans
Align length 80
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914996|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_C08.
         (269 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9TYS1|Q9TYS1_CAEEL Putative uncharacterized protein D1037.1 ...    35   1.4  
tr|Q8ESY7|Q8ESY7_OCEIH ABC transporter ATP-binding protein OS=Oc...    34   3.2  
tr|A8XED6|A8XED6_CAEBR Putative uncharacterized protein OS=Caeno...    34   3.2  
tr|Q8IDP2|Q8IDP2_PLAF7 Putative uncharacterized protein MAL13P1....    34   4.1  
tr|Q6MKC9|Q6MKC9_BDEBA Putative DNA processing protein (Smf fami...    33   5.4  
tr|Q7RRX8|Q7RRX8_PLAYO Mature-parasite-infected erythrocyte surf...    33   5.4  
tr|Q4YVA0|Q4YVA0_PLABE Putative uncharacterized protein (Fragmen...    33   5.4  
tr|Q4Y039|Q4Y039_PLACH Putative uncharacterized protein (Fragmen...    33   5.4  
tr|A6FIX5|A6FIX5_9GAMM Putative uncharacterized protein OS=Morit...    33   9.2  

>tr|Q9TYS1|Q9TYS1_CAEEL Putative uncharacterized protein D1037.1
           OS=Caenorhabditis elegans GN=D1037.1 PE=2 SV=1
          Length = 786

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/80 (23%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -3

Query: 252 DRQRAAI-DFLSNCSRIANHEEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYM 76
           DR  A+I DF++ C ++   +E+E  R+A  ++     + +T+     Y++ +EP+++ +
Sbjct: 346 DRDSASIEDFVTYCKKLQRRQEREKRREAGHDVSDHDSDRETVRYKHPYAMPKEPIRINI 405

Query: 75  DIPTYINAERLEVINLDEPS 16
              T  N  +  +   +EP+
Sbjct: 406 VTATSANLAQKAITGPEEPT 425


>tr|Q8ESY7|Q8ESY7_OCEIH ABC transporter ATP-binding protein
           OS=Oceanobacillus iheyensis GN=OB0478 PE=3 SV=1
          Length = 282

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -3

Query: 159 MRRQRIEGDTLPSLKDYSLIEEPL--QVYMDIPTYINAERLEVINLDEPSLDDLY 1
           +++Q  E   L  L+D   +E PL   +  DI  YI+ +R+E I   EP+L D++
Sbjct: 219 LKKQYREEKVLLELRDGRELELPLAPSIANDIQRYISEDRIETIRTKEPTLGDIF 273


>tr|A8XED6|A8XED6_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG12024 PE=4 SV=2
          Length = 806

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -3

Query: 252 DRQRAAI-DFLSNCSRIANHEEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYM 76
           DR  A+I DF++ C ++   +E+E  R+A   +     +G+T+     Y++ ++P+++ +
Sbjct: 366 DRDNASIEDFVTYCKKLQKRQEREKRREAGQAVSDHDSDGETVRYKHPYAMPKDPIRINI 425

Query: 75  DIPTYINAERLEVINLDEPS 16
              T  +  +  +   +EP+
Sbjct: 426 VTATSASLAQKALTGPEEPT 445


>tr|Q8IDP2|Q8IDP2_PLAF7 Putative uncharacterized protein MAL13P1.226
           OS=Plasmodium falciparum (isolate 3D7) GN=MAL13P1.226
           PE=4 SV=1
          Length = 1498

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 195 EEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYMDIPTYIN 55
           ++ E  +KA  EM+R++ E D   +   YSL+E   Q Y + P Y N
Sbjct: 657 DDLEKKKKALEEMKRKKKEKDHKKTFNIYSLLESAAQFYGEGPKYCN 703


>tr|Q6MKC9|Q6MKC9_BDEBA Putative DNA processing protein (Smf family)
           OS=Bdellovibrio bacteriovorus GN=smf PE=4 SV=1
          Length = 315

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = -3

Query: 195 EEQELYRKACSEMRRQRIEG-------DTLPSLKDYSLIEEPLQV-YMDIPTYINAERLE 40
           +  EL++K C E  + +++G       + L     Y + + PL + Y   P ++NA  L 
Sbjct: 59  KNHELFKKHCEESLQLKMQGVNFVVYGEVLYPELCYQMADPPLTLSYRGSPAWLNARTLS 118

Query: 39  VINLDEPSLDDL 4
           V+   EP+ D L
Sbjct: 119 VVGSREPAADSL 130


>tr|Q7RRX8|Q7RRX8_PLAYO Mature-parasite-infected erythrocyte surface
           antigen OS=Plasmodium yoelii yoelii GN=PY00589 PE=4 SV=1
          Length = 1231

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 195 EEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYMDIPTYIN 55
           EE E  +KA  EM++++ E D   +   YSL+E   Q + + P Y N
Sbjct: 686 EEAERKKKAIEEMKKKKREKDHKKTFNVYSLLESAAQYFGEGPKYSN 732


>tr|Q4YVA0|Q4YVA0_PLABE Putative uncharacterized protein (Fragment)
           OS=Plasmodium berghei GN=PB000745.02.0 PE=4 SV=1
          Length = 1292

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 195 EEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYMDIPTYIN 55
           EE E  +KA  EM++++ E D   +   YSL+E   Q + + P Y N
Sbjct: 519 EEAERKKKAIEEMKKKKREKDHKKTFNVYSLLESAAQYFGEGPKYSN 565


>tr|Q4Y039|Q4Y039_PLACH Putative uncharacterized protein (Fragment)
           OS=Plasmodium chabaudi GN=PC000269.02.0 PE=4 SV=1
          Length = 1355

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 195 EEQELYRKACSEMRRQRIEGDTLPSLKDYSLIEEPLQVYMDIPTYIN 55
           EE E  +KA  EM++++ E D   +   YSL+E   Q + + P Y N
Sbjct: 564 EEAERKKKAIEEMKKKKREKDHKKTFNVYSLLESAAQYFGEGPKYSN 610


>tr|A6FIX5|A6FIX5_9GAMM Putative uncharacterized protein
           OS=Moritella sp. PE36 GN=PE36_15269 PE=3 SV=1
          Length = 717

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = +2

Query: 17  LGSSRLITSSLSALIYVGM----SMYTWRGSSIKE*SLRDGNVSPSILCRLISLHAF 175
           +G +++ T S   +  VGM    ++Y W G+ + E +   G  SPS+L  L+ L  F
Sbjct: 162 MGLTKISTRSFYLVSQVGMLAGTAVYVWAGTQLSEINSLSGIASPSLLSALVLLGVF 218