BP914999 |
Clone id |
YMU001_000065_C12 |
Library |
YMU01 |
Length |
593 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000065_C12. |
Accession |
BP914999 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3490Contig1 |
Sequence |
AAAACAAAGATGTACTGGTTACTTTGGATGGGGCTCGCGAGTGCAAATAGTAGAAAATGA GCACAATGAGGAGTCAAACGTAAATAGACTTTTATACAAAAAAAGGGCACCAGTTTGACC TGATTCGTTAGGCCACAGGATCGCACGACTTTAAGGAGGAGGTGCGAGTCATGCGTTACA CATTATAATGGCTGACATGCATATGAACATTGAATTGTGCACCTTGAGAGGTGGAGATTT GCCTGAACGAATGAATATAAAGCGATGTGAGGAGGGGACCTAGCTGGCCTTTTGTATTGG CAGCATTGACAAAAGCTTGGTTATGGAAGTCATGTCTGGACAAAGAGGTTTGAAAAGGCT CAAGTGTGCTTGGGTGGAGACACTCAATTGAGCTCAGATGGCCTTACGCAGGTGGTTCCC ATGGGAGGGAAGTTGTGGCAGTGGTCTGATAGGATATATGTAATGGGAATTCTCAATTGT CACACGTAATAGTTTTAGCAATGGTTGTAAGTACTTCTTGGTGCAGGAAGCAATTTTGCA AGCTGAAGCCTTGGATCAAGCAGGTGCAAACATCATTGACTTGGGTGCACCGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P73248 |
Definition |
sp|P73248|DHPS_SYNY3 Dihydropteroate synthase OS=Synechocystis sp. (strain PCC 6803) |
Align length |
35 |
Score (bit) |
32.3 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3BM85 |
Definition |
tr|A3BM85|A3BM85_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica |
Align length |
36 |
Score (bit) |
43.1 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914999|Adiantum capillus-veneris mRNA, clone: YMU001_000065_C12. (593 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3BM85|A3BM85_ORYSJ Putative uncharacterized protein OS=Oryza... 43 2e-07 tr|B8B8L1|B8B8L1_ORYSI Putative uncharacterized protein OS=Oryza... 43 2e-07 tr|Q7X7X0|Q7X7X0_ORYSJ Os07g0618500 protein OS=Oryza sativa subs... 43 2e-07 tr|Q69V07|Q69V07_ORYSJ Putative 2-amino-4-hydroxy-6-hydroxymethy... 43 2e-07 tr|A4UIY8|A4UIY8_WHEAT HPPK/DHPS OS=Triticum aestivum PE=2 SV=1 39 9e-07 tr|B8A1T6|B8A1T6_MAIZE Putative uncharacterized protein OS=Zea m... 39 1e-06 tr|O04862|O04862_PEA Dihydropterin pyrophosphokinase /dihydropte... 38 2e-05 tr|A9S7G1|A9S7G1_PHYPA Predicted protein (Fragment) OS=Physcomit... 35 5e-05 tr|Q9SZV3|Q9SZV3_ARATH At4g30000 OS=Arabidopsis thaliana GN=AT4g... 47 0.001 tr|Q3M7Y9|Q3M7Y9_ANAVT Dihydropteroate synthase OS=Anabaena vari... 37 0.006 tr|B2JA19|B2JA19_NOSP7 Dihydropteroate synthase OS=Nostoc puncti... 37 0.006 tr|Q9LE77|Q9LE77_ARATH Putative dihydropterin pyrophosphokinase/... 44 0.007 tr|Q1ENB6|Q1ENB6_ARATH 6-hydroxymethyl-7,8-dihydropterin pyropho... 44 0.007 tr|A4RZ18|A4RZ18_OSTLU Predicted protein (Fragment) OS=Ostreococ... 36 0.009 tr|Q8YP16|Q8YP16_ANASP Dihydropteroate synthase OS=Anabaena sp. ... 36 0.010 tr|A0YUA0|A0YUA0_9CYAN Dihydropteroate synthase OS=Lyngbya sp. P... 32 0.012 tr|B0JPI9|B0JPI9_MICAN Dihydropteroate synthase OS=Microcystis a... 37 0.021 tr|A8YD76|A8YD76_MICAE Similar to tr|Q4BWV4|Q4BWV4_CROWT Dihydro... 37 0.021 tr|B8I186|B8I186_CLOCE Dihydropteroate synthase OS=Clostridium c... 31 0.027 tr|Q016T6|Q016T6_OSTTA Dihydropteroate synthase-like protein (IS... 30 0.034 tr|B8FZD6|B8FZD6_DESHD Dihydropteroate synthase OS=Desulfitobact... 39 0.034 tr|A7P2D7|A7P2D7_VITVI Chromosome chr1 scaffold_5, whole genome ... 42 0.034 tr|Q251P6|Q251P6_DESHY Putative uncharacterized protein OS=Desul... 39 0.035 tr|B1XL36|B1XL36_SYNP2 Dihydropteroate synthase OS=Synechococcus... 33 0.058 tr|A8PYT9|A8PYT9_MALGO Putative uncharacterized protein OS=Malas... 33 0.073 tr|B4WJR4|B4WJR4_9SYNE Dihydropteroate synthase OS=Synechococcus... 33 0.12 tr|A3IPC9|A3IPC9_9CHRO Dihydropteroate synthase OS=Cyanothece sp... 34 0.13 tr|Q31KT6|Q31KT6_SYNE7 Dihydropteroate synthase OS=Synechococcus... 34 0.13 tr|Q5XZD4|Q5XZD4_EUBAC Dihydropteroate synthase OS=Eubacterium a... 37 0.13 tr|Q3J5C3|Q3J5C3_RHOS4 Dihydropteroate synthase OS=Rhodobacter s... 40 0.13
>tr|A3BM85|A3BM85_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024157 PE=4 SV=1 Length = 1303
Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 16/36 (44%), Positives = 28/36 (77%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + ++G+ +V+P+G +L WS+R VMG+LN Sbjct: 904 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 939
Score = 35.0 bits (79), Expect(2) = 2e-07 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G K+ V+ AI Q + L GA+IID+GA Sbjct: 940 LTPDSFSDGGKFQEVEAAIAQTKLLISEGADIIDIGA 976
>tr|B8B8L1|B8B8L1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26885 PE=4 SV=1 Length = 604
Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 16/36 (44%), Positives = 28/36 (77%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + ++G+ +V+P+G +L WS+R VMG+LN Sbjct: 306 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 341
Score = 35.0 bits (79), Expect(2) = 2e-07 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G K+ V+ AI Q + L GA+IID+GA Sbjct: 342 LTPDSFSDGGKFQEVEAAIAQTKLLISEGADIIDIGA 378
>tr|Q7X7X0|Q7X7X0_ORYSJ Os07g0618500 protein OS=Oryza sativa subsp. japonica GN=P0552F09.130-1 PE=2 SV=1 Length = 532
Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 16/36 (44%), Positives = 28/36 (77%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + ++G+ +V+P+G +L WS+R VMG+LN Sbjct: 226 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 261
Score = 35.0 bits (79), Expect(2) = 2e-07 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G K+ V+ AI Q + L GA+IID+GA Sbjct: 262 LTPDSFSDGGKFQEVEAAIAQTKLLISEGADIIDIGA 298
>tr|Q69V07|Q69V07_ORYSJ Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase OS=Oryza sativa subsp. japonica GN=P0560B08.103-2 PE=4 SV=1 Length = 522
Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 16/36 (44%), Positives = 28/36 (77%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + ++G+ +V+P+G +L WS+R VMG+LN Sbjct: 216 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 251
Score = 35.0 bits (79), Expect(2) = 2e-07 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G K+ V+ AI Q + L GA+IID+GA Sbjct: 252 LTPDSFSDGGKFQEVEAAIAQTKLLISEGADIIDIGA 288
>tr|A4UIY8|A4UIY8_WHEAT HPPK/DHPS OS=Triticum aestivum PE=2 SV=1 Length = 530
Score = 39.3 bits (90), Expect(2) = 9e-07 Identities = 14/36 (38%), Positives = 26/36 (72%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + + G+ +V+ +G +L WS+R +MG+LN Sbjct: 225 LGGESLIGTQGIKRVMAVGNRLLDWSERTLIMGVLN 260
Score = 36.6 bits (83), Expect(2) = 9e-07 Identities = 19/37 (51%), Positives = 27/37 (72%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G K+ V+ AI QA+ L GA+IID+GA Sbjct: 261 LTPDSFSDGGKFQEVEAAIAQAKLLISEGADIIDIGA 297
>tr|B8A1T6|B8A1T6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 526
Score = 38.5 bits (88), Expect(2) = 1e-06 Identities = 14/36 (38%), Positives = 26/36 (72%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + ++ + +V+P+G +L W +R VMG+LN Sbjct: 216 LGGESIIGTESIKRVLPVGDRLLDWCERTLVMGVLN 251
Score = 36.6 bits (83), Expect(2) = 1e-06 Identities = 19/37 (51%), Positives = 27/37 (72%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G K+ V AI QA++L GA+IID+GA Sbjct: 252 LTPDSFSDGGKFLEVGAAISQAKSLISEGADIIDIGA 288
>tr|O04862|O04862_PEA Dihydropterin pyrophosphokinase /dihydropteroate synthase OS=Pisum sativum PE=2 SV=1 Length = 515
Score = 37.7 bits (86), Expect(2) = 2e-05 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + +G+ +V+P+ L WS R VMGILN Sbjct: 202 LGGESLIGEEGMYRVMPVANGLLDWSRRTLVMGILN 237
Score = 33.1 bits (74), Expect(2) = 2e-05 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 +T +SFS+G + V+ A+ QA + GA+IID+GA Sbjct: 238 LTPDSFSDGGNFQSVKSAVSQARLMISEGADIIDIGA 274
>tr|A9S7G1|A9S7G1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_125522 PE=4 SV=1 Length = 465
Score = 35.4 bits (80), Expect(2) = 5e-05 Identities = 15/37 (40%), Positives = 26/37 (70%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLGA 589 VT +SFS+G ++ V++A+ A ++ GA+ ID+GA Sbjct: 198 VTPDSFSDGGRFMAVEDAVAHARSMAAEGADFIDIGA 234
Score = 34.3 bits (77), Expect(2) = 5e-05 Identities = 14/36 (38%), Positives = 25/36 (69%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 +GG+ + ++ L +V+P+G +L S + +VMGILN Sbjct: 162 MGGEACIGNEDLRRVIPVGNELLDLSAKTHVMGILN 197
>tr|Q9SZV3|Q9SZV3_ARATH At4g30000 OS=Arabidopsis thaliana GN=AT4g30000 PE=2 SV=1 Length = 554
Score = 46.6 bits (109), Expect = 0.001 Identities = 18/36 (50%), Positives = 29/36 (80%) Frame = +1
Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477 LGG++ + DG+ +V+P+G KLW +S++ +VMGILN Sbjct: 245 LGGESLIGQDGIQRVLPIGDKLWDFSNKTHVMGILN 280
>tr|Q3M7Y9|Q3M7Y9_ANAVT Dihydropteroate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_3289 PE=4 SV=1 Length = 287
Score = 37.0 bits (84), Expect(2) = 0.006 Identities = 19/36 (52%), Positives = 26/36 (72%) Frame = +2
Query: 479 VTRNSFSNGCKYFLVQEAILQAEALDQAGANIIDLG 586 VT +SFS+G K+ A+ QA+AL AGA+IID+G Sbjct: 26 VTPDSFSDGGKFNTTSAALAQAKALVAAGADIIDVG 61
Score = 25.8 bits (55), Expect(2) = 0.006 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +1
Query: 421 MGGKLWQWSDRIYVMGILN 477 +G + + W R Y+MG+LN Sbjct: 7 IGDRCFHWGQRTYLMGVLN 25
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