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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915009
Clone id YMU001_000065_D11
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CATTCAAGGCCAGAATCTGCGCTGTGTATGTAGCAGTTCTAGATCAATATCGTTATCGTC
TCCAGCCATCAGTGCTAATGTGTAGTCAAGCAGCTGATCTCTTTTCTTTAGGGGAAAAGG
TGCAGCATGAGATGAAGCCTTGATTACTGATTGCCCTAAAAGATCAATTGCCGTAATGAC
AGCTTGCTTAGCAGTGGCTGTTCGAACATCAAGCAGGCCAGAAAGCACATTTGTTCCCTG
CATAACAGGAGCCAAGAGCATTAAAACGTTAGGTTTCAAACCCCAAGCAAAACTATACTA
GCAAACAGAAAATGTCTCAAAAAACTACAAAGTGCCAGTAGATATAGATAACAAAACTGG
GCTGCCACTTCTTTCCCCTCAATCGAGTACCCAGATGATAAAACTTTATATCATCAAAGC
AGCTTGAGCATTCAGTTAAACCATCACGTGAAAGCGATTATAAAAGAGATGGAGATTACA
GCGGGGACAGTATACCTGTATGAAGCTAGCTTTCTGTGCAGCATGCAGACAGAGCTCCCT
AGTTTACTGTTCTTACCCTCACCTTCAGCACCCTC
■■Homology search results ■■ -
sp_hit_id Q6CPV1
Definition sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis
Align length 71
Score (bit) 31.6
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915009|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_D11.
         (575 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyvero...    32   3.0  
sp|Q9RQ83|HIS1_BUCMH ATP phosphoribosyltransferase OS=Buchnera a...    32   3.0  
sp|B0UUN2|NAGB_HAES2 Glucosamine-6-phosphate deaminase OS=Haemop...    31   5.1  
sp|Q0I4B9|NAGB_HAES1 Glucosamine-6-phosphate deaminase OS=Haemop...    31   5.1  

>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6
           OS=Kluyveromyces lactis GN=PEX6 PE=3 SV=1
          Length = 1000

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = -3

Query: 291 FAWGLKPNVLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAAPFP 112
           F W   P VL    P ++  +++S  + ++T + + A +T +D+  +S++KA  +     
Sbjct: 608 FRWYFDPYVLNSQTPKLR--SLISHNVPLQTVSVQSAGLTPMDI--RSIVKAVKYKCYQR 663

Query: 111 LKKRDQLLDYT 79
           LK+ D L+D T
Sbjct: 664 LKQNDLLIDMT 674


>sp|Q9RQ83|HIS1_BUCMH ATP phosphoribosyltransferase OS=Buchnera
           aphidicola subsp. Melaphis rhois GN=hisG PE=3 SV=1
          Length = 299

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
 Frame = -3

Query: 189 KQAVITAIDLLGQSVIKASS------HAAPFPLKKRDQLLDY-------TLALMAGDDND 49
           KQ VI  +    Q VIKA        HA   P+KK ++++D        T+  +AGDD+ 
Sbjct: 206 KQNVINTLMTRIQGVIKARESKYIMLHA---PIKKLEEVIDLLHGAERPTILKLAGDDSR 262

Query: 48  IDLELLHTQRRFW 10
           + + ++ ++  FW
Sbjct: 263 VAMHMVSSETLFW 275


>sp|B0UUN2|NAGB_HAES2 Glucosamine-6-phosphate deaminase
           OS=Haemophilus somnus (strain 2336) GN=nagB PE=3 SV=1
          Length = 268

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +2

Query: 206 TSSRPESTFVPCITGAKSIKTLGFKPQAKLY*QTENVSKNYKVPVDIDNKTGLPLLSPQS 385
           T+ RP    +P  TG   ++T  +K   KLY Q E VS  Y V  ++D   GLP   P+S
Sbjct: 30  TAERPFVLGLP--TGGTPLQT--YKELIKLY-QAEEVSFKYVVTFNMDEYVGLPKEHPES 84


>sp|Q0I4B9|NAGB_HAES1 Glucosamine-6-phosphate deaminase
           OS=Haemophilus somnus (strain 129Pt) GN=nagB PE=3 SV=1
          Length = 268

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +2

Query: 206 TSSRPESTFVPCITGAKSIKTLGFKPQAKLY*QTENVSKNYKVPVDIDNKTGLPLLSPQS 385
           T+ RP    +P  TG   ++T  +K   KLY Q E VS  Y V  ++D   GLP   P+S
Sbjct: 30  TAERPFVLGLP--TGGTPLQT--YKELIKLY-QAEEVSFKYVVTFNMDEYVGLPKEHPES 84
tr_hit_id A7QJC7
Definition tr|A7QJC7|A7QJC7_VITVI Chromosome chr8 scaffold_106, whole genome shotgun sequence OS=Vitis vinifera
Align length 97
Score (bit) 92.0
E-value 2.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915009|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_D11.
         (575 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QJC7|A7QJC7_VITVI Chromosome chr8 scaffold_106, whole genom...    92   2e-17
tr|Q9ZQ93|Q9ZQ93_ARATH Putative uncharacterized protein At2g3681...    89   1e-16
tr|Q947Y4|Q947Y4_ORYSA Putative uncharacterized protein OSJNBa00...    84   7e-15
tr|B8ANB4|B8ANB4_ORYSI Putative uncharacterized protein OS=Oryza...    84   7e-15
tr|A3AE38|A3AE38_ORYSJ Putative uncharacterized protein OS=Oryza...    84   7e-15
tr|A9TNQ8|A9TNQ8_PHYPA Predicted protein OS=Physcomitrella paten...    79   2e-13
tr|A9SVP3|A9SVP3_PHYPA Predicted protein OS=Physcomitrella paten...    69   2e-10
tr|A9VBJ4|A9VBJ4_MONBE Predicted protein OS=Monosiga brevicollis...    36   1.7  

>tr|A7QJC7|A7QJC7_VITVI Chromosome chr8 scaffold_106, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000588001
           PE=4 SV=1
          Length = 1471

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
 Frame = -3

Query: 297 YSFAWGLKPN-VLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAA 121
           Y +A    P+ V+      + GTN+LS LL VR  TAKQAVITAIDLLG++VI A+   A
Sbjct: 526 YGYAARYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAESGA 585

Query: 120 PFPLKKRDQLLDYTLALMAGDDND----IDLELLHTQ 22
            FPLK+RDQLLDY L LM  DD+D      LELLHTQ
Sbjct: 586 SFPLKRRDQLLDYILTLMGCDDDDGFAESSLELLHTQ 622


>tr|Q9ZQ93|Q9ZQ93_ARATH Putative uncharacterized protein At2g36810
           OS=Arabidopsis thaliana GN=At2g36810 PE=2 SV=1
          Length = 1071

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
 Frame = -3

Query: 297 YSFAWGLKPN-VLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAA 121
           Y +A    P+ V+      + GTN+LS LL VR  TAKQAVITAIDLLG++VI A+   A
Sbjct: 515 YGYAAKYAPSSVIEARIDALVGTNMLSRLLHVRQQTAKQAVITAIDLLGRAVINAAETGA 574

Query: 120 PFPLKKRDQLLDYTLALMAGDDN----DIDLELLHTQ 22
            FPLK+RDQ+LDY L LM  D+N    +  LE+LHTQ
Sbjct: 575 TFPLKRRDQMLDYILTLMGRDENEGFAESSLEVLHTQ 611


>tr|Q947Y4|Q947Y4_ORYSA Putative uncharacterized protein
           OSJNBa0067N01.12 OS=Oryza sativa GN=OSJNBa0067N01.12
           PE=4 SV=1
          Length = 1549

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = -3

Query: 297 YSFAWGLKPN-VLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAA 121
           Y +A    P+ V+      + GTN+L   L V+  TAKQAVITAIDLLGQ+VI A+    
Sbjct: 651 YGYAAKYAPSTVIEARINALVGTNMLGRFLHVQHPTAKQAVITAIDLLGQAVITAAEMGI 710

Query: 120 PFPLKKRDQLLDYTLALMAGDDN----DIDLELLHTQ 22
            FPLK+RDQLL+Y L LM  D N    D   ELLHTQ
Sbjct: 711 SFPLKRRDQLLEYVLTLMGRDQNDDLVDFSTELLHTQ 747


>tr|B8ANB4|B8ANB4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10014 PE=4 SV=1
          Length = 1650

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = -3

Query: 297 YSFAWGLKPN-VLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAA 121
           Y +A    P+ V+      + GTN+L   L V+  TAKQAVITAIDLLGQ+VI A+    
Sbjct: 683 YGYAARYAPSTVIEARINALVGTNMLGRFLHVQHPTAKQAVITAIDLLGQAVITAAEMGI 742

Query: 120 PFPLKKRDQLLDYTLALMAGDDN----DIDLELLHTQ 22
            FPLK+RDQLL+Y L LM  D N    D   ELLHTQ
Sbjct: 743 SFPLKRRDQLLEYVLTLMGRDQNDDLVDFSTELLHTQ 779


>tr|A3AE38|A3AE38_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_009060 PE=4 SV=1
          Length = 1579

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = -3

Query: 297 YSFAWGLKPN-VLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAA 121
           Y +A    P+ V+      + GTN+L   L V+  TAKQAVITAIDLLGQ+VI A+    
Sbjct: 681 YGYAAKYAPSTVIEARINALVGTNMLGRFLHVQHPTAKQAVITAIDLLGQAVITAAEMGI 740

Query: 120 PFPLKKRDQLLDYTLALMAGDDN----DIDLELLHTQ 22
            FPLK+RDQLL+Y L LM  D N    D   ELLHTQ
Sbjct: 741 SFPLKRRDQLLEYVLTLMGRDQNDDLVDFSTELLHTQ 777


>tr|A9TNQ8|A9TNQ8_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_95148 PE=4 SV=1
          Length = 1666

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 38/76 (50%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -3

Query: 246  VMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSVIKASSHAAPFPLKKRDQLLDYTLALM 67
            ++ G+++L G L V+   +KQAV++AI+LLGQ+VIKA+ +   FPLKKRD +L+Y ++LM
Sbjct: 790  ILVGSDMLKGFLKVKAQASKQAVLSAINLLGQAVIKAAKNGTVFPLKKRDIMLNYIISLM 849

Query: 66   AGDD-NDIDLELLHTQ 22
              D+ N +D+EL HTQ
Sbjct: 850  EKDEKNSLDIELQHTQ 865


>tr|A9SVP3|A9SVP3_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_166810 PE=4 SV=1
          Length = 1855

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 36/108 (33%)
 Frame = -3

Query: 237  GTNVLSGLLDVRTATAKQAVITAIDLLG----------------------------QSVI 142
            GTN+LSG L+VR+  AKQAVITAI LLG                            Q+V+
Sbjct: 883  GTNMLSGFLNVRSPAAKQAVITAISLLGLLAPTYSSLSSEVYFKNVSSQFDDQIAGQAVL 942

Query: 141  KASSHAAPFPLKKRDQLLDYTLALMA--------GDDNDIDLELLHTQ 22
            KA+++ A FPLKKRD +LDYT+ALMA             +D  LL TQ
Sbjct: 943  KAAANGAFFPLKKRDTMLDYTMALMADQGAGYVLSTSKSLDAGLLRTQ 990


>tr|A9VBJ4|A9VBJ4_MONBE Predicted protein OS=Monosiga brevicollis
            GN=MBCDH19 PE=4 SV=1
          Length = 5119

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -3

Query: 291  FAWGLKPNVLMLLAPVMQGTNVLSGLLDVRTATAKQAVITAIDLLGQSV 145
            F+W + P  L L++    G  +L   LD  TA A Q V+TA+D L  ++
Sbjct: 1742 FSWSVAPAPLFLMSARENGAILLGQGLDAETAQAHQVVVTAVDNLNANL 1790