BP915016
Clone id YMU001_000065_E06
Library
Length 588
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCAACGCTCTCATCTGGAGGTCTCCCTTCTGAAATGGGTGAAGGATGTTCAGAAACTTC
ATGCTCGGCGTCATGTTCCGTATCATTCGCGACTGCAGAAACTTTTGGTATCCGGATGCA
TACAGAACAATTGTGACCATCTGGTTTGGAGGAATCATCGTGAACATCTTTACCAGACGA
CCTTTGATTTTCAGCGCATTTAGGACAGTACCAGGATTCATCTGGCACACTGCCAATTGC
AGGGATAATGCAGTTCATATGATAAGCAGCTTCACACCCATCACATCGAAGAACGTTATC
ATCCTCTGTCTTACAGGCTTCACAAACTCCACTTTTGCCGGCGCTCTTGTGGAGCTGCTT
GGTCGTTTCATCACTTGCAGCTAGTTTCTTGCTCTTATTCTCGTTTTTTGTACATGAGGG
GCAACACCATTCACCTTCTTGCAGTTTATTCGACGGAATTCCCGTGCAATCCATGTGAAA
CGCTGCCTGACAGAGCCTGCACATGATGTAGTCCATGCCTTGCTCAAGCCCACAGCTCTT
GCACACCCCTGATACCTTGTCTGTAACCTTCATTTTAAATACCAAAGG
■■Homology search results ■■ -
sp_hit_id Q6PDQ2
Definition sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus
Align length 124
Score (bit) 79.0
E-value 2.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915016|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_E06.
(588 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 79 2e-14
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 79 2e-14
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 79 2e-14
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 78 4e-14
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 77 5e-14
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 75 2e-13
sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=... 63 1e-09
sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=... 62 2e-09
sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing prot... 62 2e-09
sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protei... 61 5e-09
sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing prot... 61 5e-09
sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccha... 58 3e-08
sp|Q5XUN4|JAD1D_PANTR Histone demethylase JARID1D OS=Pan troglod... 58 3e-08
sp|Q9BY66|JAD1D_HUMAN Histone demethylase JARID1D OS=Homo sapien... 58 3e-08
sp|Q9UIG0|BAZ1B_HUMAN Bromodomain adjacent to zinc finger domain... 58 3e-08
sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain... 58 3e-08
sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain... 58 4e-08
sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain... 57 9e-08
sp|Q30DN6|JAD1D_CANFA Histone demethylase JARID1D OS=Canis famil... 56 1e-07
sp|A1YVX4|JAD1C_PIG Histone demethylase JARID1C OS=Sus scrofa GN... 56 2e-07
sp|P41230|JAD1C_MOUSE Histone demethylase JARID1C OS=Mus musculu... 56 2e-07
sp|P41229|JAD1C_HUMAN Histone demethylase JARID1C OS=Homo sapien... 56 2e-07
sp|Q38JA7|JAD1C_CANFA Histone demethylase JARID1C OS=Canis famil... 56 2e-07
sp|Q9Z277|BAZ1B_MOUSE Bromodomain adjacent to zinc finger domain... 56 2e-07
sp|Q9UGL1|JAD1B_HUMAN Histone demethylase JARID1B OS=Homo sapien... 55 3e-07
sp|Q5F3R2|JAD1B_CHICK Histone demethylase JARID1B OS=Gallus gall... 55 3e-07
sp|Q80Y84|JAD1B_MOUSE Histone demethylase JARID1B OS=Mus musculu... 54 4e-07
sp|P29375|JAD1A_HUMAN Histone demethylase JARID1A OS=Homo sapien... 54 6e-07
sp|Q9VMJ7|JAD1_DROME Histone demethylase lid OS=Drosophila melan... 54 8e-07
sp|Q6IQX0|JA1BB_DANRE Histone demethylase JARID1B-B OS=Danio rer... 54 8e-07

>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4
OS=Mus musculus GN=Chd4 PE=1 SV=1
Length = 1915

Score = 79.0 bits (193), Expect = 2e-14
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+HM C K EG+W CP C K + + + E
Sbjct: 366 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 423

Query: 363 TKQLHKSAG--------KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
+ L + G C CK + +L CD C ++YH++C+ P + +P+ W
Sbjct: 424 EEILEEVGGDPEEEDDHHMEFCRVCK-DGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWL 482

Query: 207 CPKC 196
CP+C
Sbjct: 483 CPRC 486



Score = 42.7 bits (99), Expect = 0.001
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 445 CRVC--KDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 494


>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4
OS=Homo sapiens GN=CHD4 PE=1 SV=1
Length = 1912

Score = 79.0 bits (193), Expect = 2e-14
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+HM C K EG+W CP C K + + + E
Sbjct: 373 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 430

Query: 363 TKQLHKSAG--------KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
+ L + G C CK + +L CD C ++YH++C+ P + +P+ W
Sbjct: 431 EEILEEVGGDLEEEDDHHMEFCRVCK-DGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWL 489

Query: 207 CPKC 196
CP+C
Sbjct: 490 CPRC 493



Score = 42.7 bits (99), Expect = 0.001
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 452 CRVC--KDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 501


>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3
OS=Homo sapiens GN=CHD3 PE=1 SV=3
Length = 2000

Score = 78.6 bits (192), Expect = 2e-14
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKN----ENKSKKLAA 376
C+ C +QG + I+C C A+H+ C ++ EG+W CP C K E K ++
Sbjct: 382 CEVC--QQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEY 439

Query: 375 SDETTKQLHKSAGKSGV--CEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCP 202
+E ++ K + C CK + +L CD C ++YH++C+ P + +P+ W CP
Sbjct: 440 EEEGEEEGEKEEEDDHMEYCRVCK-DGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCP 498

Query: 201 KC 196
+C
Sbjct: 499 RC 500



Score = 40.8 bits (94), Expect = 0.005
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCT 409
C+ C + G + + C C +++H+ C P + GEW CP CT
Sbjct: 459 CRVC--KDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501


>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5
OS=Homo sapiens GN=CHD5 PE=2 SV=1
Length = 1954

Score = 77.8 bits (190), Expect = 4e-14
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+H+ C K EG+W CP C K + + DE
Sbjct: 346 CEVC--QQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEE 403

Query: 363 TKQ--LHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPKC 196
+ + C CK + +L CD C ++YH++C+ P + +P+ W CP+C
Sbjct: 404 EEGGCEEEEDDHMEFCRVCK-DGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 460



Score = 43.1 bits (100), Expect = 0.001
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 419 CRVC--KDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGK 468


>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2
homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982

Score = 77.4 bits (189), Expect = 5e-14
Identities = 37/117 (31%), Positives = 59/117 (50%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+H+ C ++ EG+W CP C + A++E
Sbjct: 380 CEVC--QQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGG------AAEEE 431

Query: 363 TKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPKCA 193
H+ C CK + +L CD C +AYH C+ P + ++PD W CP+C+
Sbjct: 432 DDDEHQE-----FCRVCK-DGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482



Score = 50.1 bits (118), Expect = 8e-06
Identities = 29/97 (29%), Positives = 43/97 (44%)
Frame = -1

Query: 408 KNENKSKKLAASDETTKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGS 229
K +NK KK E H+ CE C+ + ++ CD C AYH+ C+ P +
Sbjct: 355 KKKNKLKKTKNFPEGEDGEHEH---QDYCEVCQ-QGGEIILCDTCPRAYHLVCLEPELDE 410

Query: 228 VPDESWYCPKCAENQRSSGKDVHDDSSKPDGHNCSVC 118
P+ W CP C E + ++ DD + C VC
Sbjct: 411 PPEGKWSCPHC-EADGGAAEEEDDDEHQ---EFCRVC 443


>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3
homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787

Score = 75.5 bits (184), Expect = 2e-13
Identities = 37/116 (31%), Positives = 54/116 (46%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C Q + ++C C A+H+ C + EG+W CP C E+ L +E
Sbjct: 268 CEVCN--QDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHC--EEHGPDVLIVEEEP 323

Query: 363 TKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPKC 196
K C CK E N+L CD C ++YH CI P + +P+ W CP+C
Sbjct: 324 AK------ANMDYCRICK-ETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372



Score = 49.7 bits (117), Expect = 1e-05
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = -1

Query: 399 NKSKKLAASDETTKQLHKSAG-----KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAI 235
+K K S +K+ K G CE C +D ++ CD C AYH+ CI +
Sbjct: 238 DKRKAALESARASKRARKEQGVVEENHQENCEVCN-QDGELMLCDTCTRAYHVACIDENM 296

Query: 234 GSVPDESWYCPKCAENQRSSGKD---VHDDSSKPDGHNCSVC 118
P+ W CP C E+ G D V ++ +K + C +C
Sbjct: 297 EQPPEGDWSCPHCEEH----GPDVLIVEEEPAKANMDYCRIC 334


>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3
OS=Homo sapiens GN=MLL3 PE=1 SV=3
Length = 4911

Score = 62.8 bits (151), Expect = 1e-09
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 2/150 (1%)
Frame = -1

Query: 561 DKVSGVCKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKL 382
D VC S G +D C C +H C I L+ W CP C
Sbjct: 341 DANCAVCDSPG--DLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--------- 389

Query: 381 AASDETTKQLHKSAGKSGVCEACKT--EDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
VC+ CK ED +L CD C+ YH C+ P + SVP W
Sbjct: 390 ------------------VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWK 431

Query: 207 CPKCAENQRSSGKDVHDDSSKPDGHNCSVC 118
C C + SS HNC +C
Sbjct: 432 CKNCRICIECGTR-----SSSQWHHNCLIC 456



Score = 52.8 bits (125), Expect = 1e-06
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Frame = -1

Query: 576 KMKVTDKVSGVCKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNK--LQEGEWCCPSCTKN 403
K + + VC S G + C C +H C I K L +G W C CT
Sbjct: 952 KFTLNQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKG-WRCLECT-- 1008

Query: 402 ENKSKKLAASDETTKQLHKSAGKSGVCEAC--KTEDDNVLRCDGCEAAYHMNCIIPAIGS 229
VCEAC T+ +L CD C+ +YH C+ P + +
Sbjct: 1009 -------------------------VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQT 1043

Query: 228 VPDESWYCPKC 196
VP W C C
Sbjct: 1044 VPKGGWKCKWC 1054



Score = 36.2 bits (82), Expect = 0.13
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Frame = -1

Query: 546 VCKSCGLEQGMD-YIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAA-- 376
VC++CG ++C C ++H C P + +G W C C + A
Sbjct: 1009 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 1068

Query: 375 ----SDETTKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNC----IIPAIGSVPD 220
++ T S VC E+D +L+C C+ H C + +V D
Sbjct: 1069 CEWQNNYTQCAPCASLSSCPVCYRNYREEDLILQCRQCDRWMHAVCQNLNTEEEVENVAD 1128

Query: 219 ESWYCPKC 196
+ C C
Sbjct: 1129 IGFDCSMC 1136


>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus
musculus GN=Mll3 PE=2 SV=2
Length = 4903

Score = 62.4 bits (150), Expect = 2e-09
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 2/150 (1%)
Frame = -1

Query: 561 DKVSGVCKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKL 382
D VC S G +D C C +H C I L+ W CP C
Sbjct: 340 DANCAVCDSPG--DLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK--------- 388

Query: 381 AASDETTKQLHKSAGKSGVCEACKT--EDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
VC+ CK ED +L CD C+ YH C+ P + SVP W
Sbjct: 389 ------------------VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWK 430

Query: 207 CPKCAENQRSSGKDVHDDSSKPDGHNCSVC 118
C C + SS HNC +C
Sbjct: 431 CKNCRICIECGTR-----SSTQWHHNCLIC 455



Score = 52.4 bits (124), Expect = 2e-06
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Frame = -1

Query: 546 VCKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNK--LQEGEWCCPSCTKNENKSKKLAAS 373
VC S G + C C +H C I K L +G W C CT
Sbjct: 955 VCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKG-WRCLECT------------ 1001

Query: 372 DETTKQLHKSAGKSGVCEAC--KTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPK 199
VCEAC T+ +L CD C+ +YH C+ P + +VP W C
Sbjct: 1002 ---------------VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKW 1046

Query: 198 C 196
C
Sbjct: 1047 C 1047



Score = 35.4 bits (80), Expect = 0.21
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 11/128 (8%)
Frame = -1

Query: 546 VCKSCGLEQGMD-YIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAAS- 373
VC++CG ++C C ++H C P + +G W C C + A
Sbjct: 1002 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLR 1061

Query: 372 ---DETTKQLHKSAGKSGVCEACKT--EDDNVLRCDGCEAAYHMNC----IIPAIGSVPD 220
Q A S C+ E+D +L+C C+ H C + +V D
Sbjct: 1062 CEWQNNYTQCAPCASLSSCPVCCRNYREEDLILQCRQCDRWMHAVCQNLNTEEEVENVAD 1121

Query: 219 ESWYCPKC 196
+ C C
Sbjct: 1122 IGFDCSMC 1129


>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein
1 OS=Homo sapiens GN=PHRF1 PE=1 SV=2
Length = 1649

Score = 62.0 bits (149), Expect = 2e-09
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Frame = -1

Query: 501 CRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDETT------------- 361
C +C AF G P N + C C +K+ D T
Sbjct: 108 CPICLNAFRDQAVGTPENC---AHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGK 164

Query: 360 --KQLHKSAGKSG-------VCEACKTED--DNVLRCDGCEAAYHMNCIIPAIGSVPDES 214
K++ K+ CE C D D +L CDGC+A YHM C+ P + VP +
Sbjct: 165 ILKKIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDE 224

Query: 213 WYCPKCA 193
W+CP+CA
Sbjct: 225 WFCPECA 231



Score = 42.7 bits (99), Expect = 0.001
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Frame = -1

Query: 543 CKSCGLEQGMD-YIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSC-------------TK 406
C+ CG D ++C C A +HM+C P ++ EW CP C
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVS 245

Query: 405 NENKSKKLAASDETTKQLHKSAGKS 331
E S LA TT +L AG++
Sbjct: 246 EEEVSLLLADVVPTTSRLRPRAGRT 270


>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1
OS=Rattus norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685

Score = 60.8 bits (146), Expect = 5e-09
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = -1

Query: 324 CEACKTED--DNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPKCA 193
CE C D D +L CDGC+A YHM C+ P + VP + W+CP+CA
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 236



Score = 41.6 bits (96), Expect = 0.003
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Frame = -1

Query: 543 CKSCGLEQGMD-YIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSC-------------TK 406
C+ CG D ++C C A +HM+C P ++ EW CP C
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPVS 250

Query: 405 NENKSKKLAASDETTKQLHKSAGKS 331
+E S LA TT +L G++
Sbjct: 251 DEEVSLLLADVVPTTSRLRPRVGRT 275


tr_hit_id A3KN93
Definition tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis
Align length 123
Score (bit) 82.8
E-value 1.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915016|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_E06.
(588 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd... 83 1e-14
tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=c... 80 9e-14
tr|B5DQA0|B5DQA0_DROPS GA23929 OS=Drosophila pseudoobscura pseud... 79 1e-13
tr|B4H036|B4H036_DROPE GL22908 OS=Drosophila persimilis GN=GL229... 79 1e-13
tr|B3KY63|B3KY63_HUMAN cDNA FLJ16830 fis, clone UTERU3022536, hi... 79 1e-13
tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate chrom... 79 2e-13
tr|A9JSS2|A9JSS2_DANRE Si:ch211-51m24.3 protein (Fragment) OS=Da... 79 2e-13
tr|A4IG92|A4IG92_DANRE Si:ch211-51m24.3 protein (Fragment) OS=Da... 79 2e-13
tr|Q8BM83|Q8BM83_MOUSE Putative uncharacterized protein (Fragmen... 79 2e-13
tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus muscu... 79 2e-13
tr|Q4S447|Q4S447_TETNG Chromosome 20 SCAF14744, whole genome sho... 78 3e-13
tr|A8Q9I0|A8Q9I0_BRUMA CHD4 protein, putative OS=Brugia malayi G... 78 3e-13
tr|Q6ZSZ4|Q6ZSZ4_HUMAN cDNA FLJ45103 fis, clone BRAWH3032571, mo... 78 4e-13
tr|A6NMM4|A6NMM4_HUMAN Putative uncharacterized protein CHD5 OS=... 78 4e-13
tr|A2A8L1|A2A8L1_MOUSE Chromodomain helicase DNA binding protein... 77 6e-13
tr|Q59E34|Q59E34_DROME Mi-2, isoform B OS=Drosophila melanogaste... 77 6e-13
tr|B4PFW6|B4PFW6_DROYA GE22457 OS=Drosophila yakuba GN=Dyak\GE22... 77 6e-13
tr|B4ML97|B4ML97_DROWI GK17504 OS=Drosophila willistoni GN=GK175... 77 6e-13
tr|B4LBL9|B4LBL9_DROVI GJ13998 OS=Drosophila virilis GN=GJ13998 ... 77 6e-13
tr|B4L0W7|B4L0W7_DROMO GI13663 OS=Drosophila mojavensis GN=GI136... 77 6e-13
tr|B4IXP0|B4IXP0_DROGR GH16907 OS=Drosophila grimshawi GN=GH1690... 77 6e-13
tr|B4IIS0|B4IIS0_DROSE GM15785 OS=Drosophila sechellia GN=GM1578... 77 6e-13
tr|B3NE02|B3NE02_DROER GG13363 OS=Drosophila erecta GN=GG13363 P... 77 6e-13
tr|B3M8T6|B3M8T6_DROAN GF10842 OS=Drosophila ananassae GN=GF1084... 77 6e-13
tr|Q4T5L7|Q4T5L7_TETNG Chromosome undetermined SCAF9199, whole g... 77 7e-13
tr|Q8BR71|Q8BR71_MOUSE Putative uncharacterized protein (Fragmen... 77 7e-13
tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein... 77 7e-13
tr|B1AR16|B1AR16_MOUSE Chromodomain helicase DNA binding protein... 77 7e-13
tr|A9JRU7|A9JRU7_DANRE Wu:fd12d03 protein (Fragment) OS=Danio re... 77 9e-13
tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3... 77 9e-13

>tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd5
PE=2 SV=1
Length = 1888

Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKN-------ENKSKK 385
C+ C +QG + I+C C A+HM C +K EG+W CP C K E+ S+
Sbjct: 363 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQWEAKEDNSEI 420

Query: 384 LAASDETTKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYC 205
D+T + C CK + +L CD C ++YH++C+ P + +P+ W C
Sbjct: 421 DDDMDDTVGDPEEEDHHMEFCRVCK-DGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLC 479

Query: 204 PKC 196
P+C
Sbjct: 480 PRC 482



Score = 42.7 bits (99), Expect = 0.015
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 441 CRVC--KDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 490


>tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=chd5
PE=2 SV=1
Length = 1893

Score = 80.1 bits (196), Expect = 9e-14
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+HM C +K EG+W CP C K + + + E
Sbjct: 364 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQWEAKEDNSEL 421

Query: 363 TKQLHKSAG-------KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYC 205
L + G C CK + +L CD C ++YH++C+ P + +P+ W C
Sbjct: 422 DDDLDDAVGDPEEEDHHMEFCRVCK-DGGELLCCDVCPSSYHIHCLNPPLPEIPNGEWLC 480

Query: 204 PKC 196
P+C
Sbjct: 481 PRC 483



Score = 43.5 bits (101), Expect = 0.009
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C +C +++H+ C P ++ GEW CP CT K K
Sbjct: 442 CRVC--KDGGELLCCDVCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPPLKGK 491


>tr|B5DQA0|B5DQA0_DROPS GA23929 OS=Drosophila pseudoobscura
pseudoobscura GN=GA23929 PE=4 SV=1
Length = 2036

Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/117 (32%), Positives = 60/117 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+H+ C ++ EG+W CP C + A++E
Sbjct: 377 CEVC--QQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGG------AAEEE 428

Query: 363 TKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPKCA 193
H+ C CK + +L CD C +AYH C+ PA+ ++PD W CP+C+
Sbjct: 429 DDDEHQE-----FCRVCK-DGGELLCCDSCPSAYHTFCLNPALDTIPDGDWRCPRCS 479



Score = 50.1 bits (118), Expect = 1e-04
Identities = 29/97 (29%), Positives = 43/97 (44%)
Frame = -1

Query: 408 KNENKSKKLAASDETTKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGS 229
K +NK KK E H+ CE C+ + ++ CD C AYH+ C+ P +
Sbjct: 352 KKKNKLKKTKNFPEGEDGEHEH---QDYCEVCQ-QGGEIILCDTCPRAYHLVCLEPELDE 407

Query: 228 VPDESWYCPKCAENQRSSGKDVHDDSSKPDGHNCSVC 118
P+ W CP C E + ++ DD + C VC
Sbjct: 408 PPEGKWSCPHC-EADGGAAEEEDDDEHQ---EFCRVC 440


>tr|B4H036|B4H036_DROPE GL22908 OS=Drosophila persimilis GN=GL22908
PE=4 SV=1
Length = 1898

Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/117 (32%), Positives = 60/117 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+H+ C ++ EG+W CP C + A++E
Sbjct: 235 CEVC--QQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADGG------AAEEE 286

Query: 363 TKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCPKCA 193
H+ C CK + +L CD C +AYH C+ PA+ ++PD W CP+C+
Sbjct: 287 DDDEHQE-----FCRVCK-DGGELLCCDSCPSAYHTFCLNPALDTIPDGDWRCPRCS 337



Score = 50.1 bits (118), Expect = 1e-04
Identities = 29/97 (29%), Positives = 43/97 (44%)
Frame = -1

Query: 408 KNENKSKKLAASDETTKQLHKSAGKSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGS 229
K +NK KK E H+ CE C+ + ++ CD C AYH+ C+ P +
Sbjct: 210 KKKNKLKKTKNFPEGEDGEHEH---QDYCEVCQ-QGGEIILCDTCPRAYHLVCLEPELDE 265

Query: 228 VPDESWYCPKCAENQRSSGKDVHDDSSKPDGHNCSVC 118
P+ W CP C E + ++ DD + C VC
Sbjct: 266 PPEGKWSCPHC-EADGGAAEEEDDDEHQ---EFCRVC 298


>tr|B3KY63|B3KY63_HUMAN cDNA FLJ16830 fis, clone UTERU3022536,
highly similar to Chromodomain helicase-DNA-binding
protein 4 (EC 3.6.1.-) OS=Homo sapiens PE=2 SV=1
Length = 1886

Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+HM C K EG+W CP C K + + + E
Sbjct: 347 CEVC--QQGGEIILCDTCPRAYHMVCLDSDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 404

Query: 363 TKQLHKSAG--------KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
+ L + G C CK + +L CD C ++YH++C+ P + +P+ W
Sbjct: 405 EEILEEVGGDLEEEDDHHMEFCRVCK-DGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWL 463

Query: 207 CPKC 196
CP+C
Sbjct: 464 CPRC 467



Score = 42.7 bits (99), Expect = 0.015
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 426 CRVC--KDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 475


>tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate
chromodomain helicase DNA binding protein 4 (CHD4)
OS=Danio rerio GN=si:ch211-51m24.3 PE=1 SV=1
Length = 1929

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKN--ENKSKKLAASD 370
C+ C +QG + I+C C A+HM C K EG W CP C K + ++++ A+
Sbjct: 357 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWEAREDASEG 414

Query: 369 ETTKQLHKSAGKSG----VCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCP 202
E + A + C CK + +L CD C ++YH++C+ P + +P+ W CP
Sbjct: 415 EEDNEAGGEAEEDDHHMEFCRVCK-DGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICP 473

Query: 201 KC 196
+C
Sbjct: 474 RC 475



Score = 43.1 bits (100), Expect = 0.012
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 434 CRVC--KDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGK 483


>tr|A9JSS2|A9JSS2_DANRE Si:ch211-51m24.3 protein (Fragment) OS=Danio
rerio GN=si:ch211-51m24.3 PE=2 SV=1
Length = 586

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKN--ENKSKKLAASD 370
C+ C +QG + I+C C A+HM C K EG W CP C K + ++++ A+
Sbjct: 356 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWEAREDASEG 413

Query: 369 ETTKQLHKSAGKSG----VCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCP 202
E + A + C CK + +L CD C ++YH++C+ P + +P+ W CP
Sbjct: 414 EEDNEAGGEAEEDDHHMEFCRVCK-DGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICP 472

Query: 201 KC 196
+C
Sbjct: 473 RC 474



Score = 43.1 bits (100), Expect = 0.012
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 433 CRVC--KDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGK 482


>tr|A4IG92|A4IG92_DANRE Si:ch211-51m24.3 protein (Fragment) OS=Danio
rerio GN=si:ch211-51m24.3 PE=2 SV=1
Length = 584

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKN--ENKSKKLAASD 370
C+ C +QG + I+C C A+HM C K EG W CP C K + ++++ A+
Sbjct: 356 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWEAREDASEG 413

Query: 369 ETTKQLHKSAGKSG----VCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWYCP 202
E + A + C CK + +L CD C ++YH++C+ P + +P+ W CP
Sbjct: 414 EEDNEAGGEAEEDDHHMEFCRVCK-DGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICP 472

Query: 201 KC 196
+C
Sbjct: 473 RC 474



Score = 43.1 bits (100), Expect = 0.012
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 433 CRVC--KDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGK 482


>tr|Q8BM83|Q8BM83_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Chd4 PE=2 SV=1
Length = 1045

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+HM C K EG+W CP C K + + + E
Sbjct: 118 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 175

Query: 363 TKQLHKSAG--------KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
+ L + G C CK + +L CD C ++YH++C+ P + +P+ W
Sbjct: 176 EEILEEVGGDPEEEDDHHMEFCRVCK-DGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWL 234

Query: 207 CPKC 196
CP+C
Sbjct: 235 CPRC 238



Score = 42.7 bits (99), Expect = 0.015
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 197 CRVC--KDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 246


>tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus musculus
GN=Chd4 PE=2 SV=1
Length = 1945

Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSKKLAASDET 364
C+ C +QG + I+C C A+HM C K EG+W CP C K + + + E
Sbjct: 394 CEVC--QQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEG 451

Query: 363 TKQLHKSAG--------KSGVCEACKTEDDNVLRCDGCEAAYHMNCIIPAIGSVPDESWY 208
+ L + G C CK + +L CD C ++YH++C+ P + +P+ W
Sbjct: 452 EEILEEVGGDPEEEDDHHMEFCRVCK-DGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWL 510

Query: 207 CPKC 196
CP+C
Sbjct: 511 CPRC 514



Score = 42.7 bits (99), Expect = 0.015
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1

Query: 543 CKSCGLEQGMDYIMCRLCQAAFHMDCTGIPSNKLQEGEWCCPSCTKNENKSK 388
C+ C + G + + C C +++H+ C P ++ GEW CP CT K K
Sbjct: 473 CRVC--KDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 522