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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915017
Clone id YMU001_000065_E07
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000065_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCTTGTTATATAAATGCATGAAGACTTCGTTATAAAGAGCATGCATGTAGTTGCCAGAGC
TTTTTGCTGTCAATTTGATGCGCTCTTGCTCTAGCATTAAGGTGTTAGGAAGTGATGTGC
ATATGCATGCAACTTCACGGATAGGCTTGAGAATACTATCTAATGGAGCTCTCCTGAGCA
CGAGTACCGTTTCCCTTTTCTGGTGTTTTCATCAGAAATTCTCATCTCCAGTCATTGTCT
TGTGAAGACCACTGGAGAGGGGCCAAAAGCTGTTGATCAATTTTTTCCTTGGAGAAGCCA
CTAGGGTGGAGGAGACTCTGGTTTTGTGTGGTCTCTACGTGAGCTTGTATATGAGGCTAT
CCCTCTGCTCATGAAACAGTACATAGTTTGGAGTGTACTAATAATCTGGGTTGCTGGTGT
ATGCGATTTGTTGCAGAAGCAGACTCTTTTTACCCTTTTTGTTAGGGCCAAGAGGAGCAT
TGTGTTTGCTCCTGCTGTGTACAATGGCAATCCGATTGATAAGGACATATGA
■■Homology search results ■■ -
sp_hit_id Q54HM0
Definition sp|Q54HM0|ABCGG_DICDI ABC transporter G family member 16 OS=Dictyostelium discoideum
Align length 41
Score (bit) 29.6
E-value 9.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915017|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_E07.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54HM0|ABCGG_DICDI ABC transporter G family member 16 OS=Dict...    30   9.4  
sp|Q8N0X2|SPG16_HUMAN Sperm-associated antigen 16 protein OS=Hom...    30   9.5  
sp|P15261|INGR1_MOUSE Interferon-gamma receptor alpha chain OS=M...    30   9.5  

>sp|Q54HM0|ABCGG_DICDI ABC transporter G family member 16
            OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1
          Length = 1528

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 249  PLERGQKLLINFFLGEATRVEETLVLCGLYVSLYMRLSLCS 371
            P+ +G ++L  F + +  + E+T VL GL++   + + + S
Sbjct: 1481 PITQGNQVLYQFDINDTDKFEDTFVLIGLFIGFLLLILIFS 1521


>sp|Q8N0X2|SPG16_HUMAN Sperm-associated antigen 16 protein OS=Homo
           sapiens GN=SPAG16 PE=2 SV=2
          Length = 631

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 514 RIAIVHSRSKHNAPLGPNKKG 452
           +I + HSR K NAP GP +KG
Sbjct: 275 QIKVDHSREKENAPEGPTQKG 295


>sp|P15261|INGR1_MOUSE Interferon-gamma receptor alpha chain OS=Mus
           musculus GN=Ifngr1 PE=1 SV=2
          Length = 477

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 435 CNKSHTPATQIISTLQTMYCFMSRGIASYTSSRRDHTKPESPPP 304
           CN++       +STL + YC    GI+S+   R + +K    PP
Sbjct: 203 CNETLCELNISVSTLDSRYCISVDGISSFWQVRTEKSKDVCIPP 246
tr_hit_id B6QR18
Definition tr|B6QR18|B6QR18_PENMA Nuclear mRNA splicing factor-associated protein, putative OS=Penicillium marneffei ATCC 18224
Align length 54
Score (bit) 36.2
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915017|Adiantum capillus-veneris mRNA, clone:
YMU001_000065_E07.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6QR18|B6QR18_PENMA Nuclear mRNA splicing factor-associated p...    36   1.1  
tr|B6QR17|B6QR17_PENMA Nuclear mRNA splicing factor-associated p...    36   1.1  
tr|B6QR16|B6QR16_PENMA Nuclear mRNA splicing factor-associated p...    36   1.1  
tr|B8LVM1|B8LVM1_9EURO Nuclear mRNA splicing factor-associated p...    35   2.4  
tr|B8LVM0|B8LVM0_9EURO Nuclear mRNA splicing factor-associated p...    35   2.4  
tr|A6BFJ0|A6BFJ0_9FIRM Putative uncharacterized protein OS=Dorea...    33   7.0  

>tr|B6QR18|B6QR18_PENMA Nuclear mRNA splicing factor-associated
           protein, putative OS=Penicillium marneffei ATCC 18224
           GN=PMAA_042630 PE=4 SV=1
          Length = 275

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -1

Query: 208 KHQKRETVLVLRRAPLDSILKPIREVACICTSLPNTLMLEQERIKLTAKSSGNY 47
           K Q+  T + +   PLD+ L  IR+V C C  +   +   + RIK+    SGN+
Sbjct: 105 KRQRVNTAVYITSIPLDATLDEIRDVFCKCGVIAEEIDSGRPRIKMYMDDSGNF 158


>tr|B6QR17|B6QR17_PENMA Nuclear mRNA splicing factor-associated
           protein, putative OS=Penicillium marneffei ATCC 18224
           GN=PMAA_042630 PE=4 SV=1
          Length = 363

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -1

Query: 208 KHQKRETVLVLRRAPLDSILKPIREVACICTSLPNTLMLEQERIKLTAKSSGNY 47
           K Q+  T + +   PLD+ L  IR+V C C  +   +   + RIK+    SGN+
Sbjct: 105 KRQRVNTAVYITSIPLDATLDEIRDVFCKCGVIAEEIDSGRPRIKMYMDDSGNF 158


>tr|B6QR16|B6QR16_PENMA Nuclear mRNA splicing factor-associated
           protein, putative OS=Penicillium marneffei ATCC 18224
           GN=PMAA_042630 PE=4 SV=1
          Length = 390

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -1

Query: 208 KHQKRETVLVLRRAPLDSILKPIREVACICTSLPNTLMLEQERIKLTAKSSGNY 47
           K Q+  T + +   PLD+ L  IR+V C C  +   +   + RIK+    SGN+
Sbjct: 105 KRQRVNTAVYITSIPLDATLDEIRDVFCKCGVIAEEIDSGRPRIKMYMDDSGNF 158


>tr|B8LVM1|B8LVM1_9EURO Nuclear mRNA splicing factor-associated
           protein, putative OS=Talaromyces stipitatus ATCC 10500
           GN=TSTA_075230 PE=4 SV=1
          Length = 284

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1

Query: 208 KHQKRETVLVLRRAPLDSILKPIREVACICTSLPNTLMLEQERIKLTAKSSGNY 47
           K Q+  T + +   PLD+ L  IR+V C C  +   +   + RIK+    +GN+
Sbjct: 104 KRQRVNTAVYITSIPLDATLDEIRDVFCKCGVIAEEIDSGRPRIKMYMDEAGNF 157


>tr|B8LVM0|B8LVM0_9EURO Nuclear mRNA splicing factor-associated
           protein, putative OS=Talaromyces stipitatus ATCC 10500
           GN=TSTA_075230 PE=4 SV=1
          Length = 389

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1

Query: 208 KHQKRETVLVLRRAPLDSILKPIREVACICTSLPNTLMLEQERIKLTAKSSGNY 47
           K Q+  T + +   PLD+ L  IR+V C C  +   +   + RIK+    +GN+
Sbjct: 104 KRQRVNTAVYITSIPLDATLDEIRDVFCKCGVIAEEIDSGRPRIKMYMDEAGNF 157


>tr|A6BFJ0|A6BFJ0_9FIRM Putative uncharacterized protein OS=Dorea
           longicatena DSM 13814 GN=DORLON_01062 PE=4 SV=1
          Length = 480

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 244 EDHWRGAKSC*SIFSLEKPLGWRRLWFCVVST*ACI*GYPSAH 372
           E H+  ++ C   F  EKP+   R W C++ST   + GYP  H
Sbjct: 408 EFHYYDSEVCGEAFLAEKPMS-NRSWKCMISTDTVLAGYPHIH 449